Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cco08g1669 ATGCCTTTCCTCTGCTTTTGGTGCTTTGCCGCCGCTGCTCTCTCAATCGTCGCCGTTTTTCGATTTTATCTGAAGAATAAGCCGCCCCGCTCGCGGAGTTCGCATTCTTCTCCTCCTGGAAGCAGAGGTTTGCCTCTCATTGGAGAGACGCTCCAGTTCATGGCCGCCGTCAACTGCAGCAACGGCGTTTATGATTTCGTCACAACCCGCTGCCTCCGGTACGGAGGATGCTTTAAGACTCGAATATTTGGAGAGACGCATGTGTTTGTTTCGAGCAACGAATCGGCGAAGCTTATACTCAACGACGGCGGAGGCAGGTTCACTAAGAAGTATATAAAGTCCATTGCTGAGCTAGTCGGCCATCAAAGTTTGCTTTGTGCTTCACATTTGCACCACAAATTCTTACGTAATCGTCTCATCAATCTTTTCTCCTCCTGTTTTTTGGCCTCTTTCGTTACGCAATTCGATCAACAAATTGTTCTGACGTTTCGATGTTGGAATACTGGTTCCACCATTGTCCTCCTGAACGAAGCCCTCAAGATAACATGCAAAGCAATGTGCAAGATGCTGATAAGCTTAGAAAAGGAAAACGAAGTAGAGGCATTCCAGAAAGAGGTTGGTTATGTATGTGAAGCTATGCTTGCATTCCCATGGAGATTTCCAGGGACAAGATTCCACAAAGGCCTCAAGGCAAGAAGAAGAATCATAAAAATACTCGAAAGGATGATTCAAGAGAGACGAGAATCAGAGCCTCAGCATGGAGATTTCTTACAACGGCTGTTGACAGAGGAGGACGGTGGAGAACCGCTATCAGATGCAGAGATCGGAGATAATATATTGACGATGTTGATTGCTGGACAGGATACCACGGCGAGTGCCATCACTTGGATGATGAAGTTCTTACATGAGAATCAAGATGTACTCCAAAATCTAAAGGAAGAACAATTCAGAATATTGGGCAAAAAACAAGATCATGGGAGTTGTTTCCTTACTTTGGAAGATCTACGCAACATGCCTTATGCTGCCAAGGTAGTAAAAGAATCATTGAGGTTAGCATCTATCGTGCCATGGTTCCCAAGACTAATCCTTCACGATACTGAAATGGAAGGTTACAAAATCAAGAAAGGTTGGAATGTTAACATTGACGTGAGATCACTACACTTGGATCCTTCTCTCTATAAAGATCCTATCAAGTTTAATCCATCCAGGTTTGATGAAGAAGCAAAGCCCTTTAGCTTTCTAGCTTTTGGGATGGGAGGGAGGCAATGTCTAGGGATGAATCTAGCCAAAGCCATGATGCTTGTTTTTCTTCACCGCTTGGTGACTTCTTTCAGATGGAAGGTAATCGACTCCGACTCTAGCATTGAGAAGTGGGCCCTTTTTACCAAATTAAAGAGCGGTTGTCCAATCCTCATCACACGTATTGAATCTTAA 1434 44.28 MPFLCFWCFAAAALSIVAVFRFYLKNKPPRSRSSHSSPPGSRGLPLIGETLQFMAAVNCSNGVYDFVTTRCLRYGGCFKTRIFGETHVFVSSNESAKLILNDGGGRFTKKYIKSIAELVGHQSLLCASHLHHKFLRNRLINLFSSCFLASFVTQFDQQIVLTFRCWNTGSTIVLLNEALKITCKAMCKMLISLEKENEVEAFQKEVGYVCEAMLAFPWRFPGTRFHKGLKARRRIIKILERMIQERRESEPQHGDFLQRLLTEEDGGEPLSDAEIGDNILTMLIAGQDTTASAITWMMKFLHENQDVLQNLKEEQFRILGKKQDHGSCFLTLEDLRNMPYAAKVVKESLRLASIVPWFPRLILHDTEMEGYKIKKGWNVNIDVRSLHLDPSLYKDPIKFNPSRFDEEAKPFSFLAFGMGGRQCLGMNLAKAMMLVFLHRLVTSFRWKVIDSDSSIEKWALFTKLKSGCPILITRIES 477
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
8 28151943 28157169 + CcPI632755_08g016690.1 Cco08g1669 186143
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cco08g1669 477 SUPERFAMILY Cytochrome P450 31 474 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco08g1669 477 Pfam Cytochrome P450 38 452 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco08g1669 477 CDD CYP90-like 70 474 - -
Cco08g1669 477 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 416 425 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Cco08g1669 477 PRINTS P450 superfamily signature 423 434 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco08g1669 477 PRINTS P450 superfamily signature 343 354 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco08g1669 477 PRINTS P450 superfamily signature 285 302 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco08g1669 477 PRINTS P450 superfamily signature 414 423 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco08g1669 477 PRINTS E-class P450 group I signature 294 320 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco08g1669 477 PRINTS E-class P450 group I signature 423 446 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco08g1669 477 PRINTS E-class P450 group I signature 342 360 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco08g1669 477 PRINTS E-class P450 group I signature 274 291 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco08g1669 477 PRINTS E-class P450 group I signature 413 423 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco08g1669 477 PRINTS E-class P450 group I signature 382 406 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco08g1669 477 PANTHER CYTOCHROME P450 26 38 444 - GO:0004497(PANTHER)|GO:0007275(PANTHER)|GO:0010268(PANTHER)|GO:0016125(PANTHER)|GO:0016132(PANTHER)|GO:0016491(PANTHER)
Cco08g1669 477 Gene3D Cytochrome P450 27 474 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco08g1669 Cco-Chr8:28151943 Cco09g0966 Cco-Chr9:9113550 9.70E-82 dispersed
Cco04g1741 Cco-Chr4:32455840 Cco08g1669 Cco-Chr8:28151943 4.40E-115 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco08g1669 - - - 0.0