Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cco08g1726 | ATGTCGATAACCTCCATTACTATCCCTTCTCTTCAACCCCACTTGCGATTTCCCTCCCAAGAAAAGTCTCACAGATCTCGTTCTAGAGTTGGGTTCGTTTCCCTACGCCCAATCTACGCCGCCGACAGGGTTTCCTCCTCGTCTCCCTCGCCTGTTCAAGTGCCGCAGCGGACTGTTTCGCCGCCGGAACCCACGAAGCTTCCTTTGAGGAAGATTCCAGGTGACTATGGGCCGCCGATGTTTGGGGCGTTGAAGGACCGACAAGATTATTTCTACAATCAGGGGAGAGAAGAGTATCTGAAATCTCGAATGCTACGATATGAATCCACTGTTTATAGAACCAATATGCCACCGGGTCCATTTATCACTTCTGATTCTCGAGTTGTTGTTTTACTCGACGGGAAGAGTTTTCCTGTTCTTTTCGACAATTCTAAAGTTGAGAAGAAGGATCTCTTTACCGGGACTTACATGCCTTCAACAGAGCTCACAGGCGGTTACAGGGTTCTCTCTTATATTGACCCATCTGAGCCCAATCACGAGAAGCTTAAACAGCTGATCTTCTTCCTCCTCAAGCACCGTCGGGACAAAATTATGCCCGAATTTCACTCTACTTTTTCCGAGCTATTCGAGGCTCTGGAGAAGGATTTGGCTGCTGCTGGTAAAGCAGAGTACAATGCTTCCGGTGAACAGGCGGCGTTTAATTTCTTGGCTCGGTCTCTTTTCGGCGCCAATCCAGTCGATACAAAATTGGGTCGGGACGCTCCGAAATTGATTGCGAAATGGGTTTTGTTCCAGCTTGGCCCTGTTCTCAGTCTCGGCCTCCCCAAGGTTGTCGAGGAGCTTCTCCTCCGCACGTTCCGGCTCCCGCCGGCGCTGATCAAAGCCGATTACCGGCGGCTGTACGACTTCTTTTACCAATCGTCGGAGGTGGTGTTTGAGGAAGCAGATAGATTGGGGATTTCGAGGGAAGAAGCTTGCCACAACTTGCTATTTACAACTTGTTTTAATTCATTCGGAGGGATGAAGATCTTCTTCCCCAATATGATCAAATGGATCGGCCGAGCCGGAGTGAATCTCCACACCCAACTCGCACGGGAGATTCGCACTGCCGTAAAAGCCAACGGTGGGAAAATCACGATGAGGGCTATGGAACAGATGCCGCTGATGAAATCAGTGGTGTATGAAGCGTTCAGAATCGAGCCGCCGGTTCCGGTTCAGTACGGTCGGGCGAAGAAAGACCTTGTGGTCGAAAGCCACGACGCGGCTTTCGAGATCAAAGAAGGGGAAGTGATTTGTGGGTATCAGCCATTTGCTACCAGAGATCCGAAAATCTTCGACAGAGCCGACGAGTTCGTGCCTGATCGGTTCACCGGCGACGGCGAAGAGTTGCTGAAACACGTGCTATGGTCAAATGGACCGGAGACTCAATCGCCGACGGTTCAGAACAAACAGTGCGCCGGAAAAGACTTCATCGTCTTCGTCTCTCGCCTTCTGGTCGTCGAACTGTTCCTCCGGTACGACTCGTTCGACATCGAAGCCGCAAACACTCCGTTAGGCGCTGCCGTCACTGTAACTTCCCTAAAGAAAGCAAGTTTCTGA | 1599 | 50.84 | MSITSITIPSLQPHLRFPSQEKSHRSRSRVGFVSLRPIYAADRVSSSSPSPVQVPQRTVSPPEPTKLPLRKIPGDYGPPMFGALKDRQDYFYNQGREEYLKSRMLRYESTVYRTNMPPGPFITSDSRVVVLLDGKSFPVLFDNSKVEKKDLFTGTYMPSTELTGGYRVLSYIDPSEPNHEKLKQLIFFLLKHRRDKIMPEFHSTFSELFEALEKDLAAAGKAEYNASGEQAAFNFLARSLFGANPVDTKLGRDAPKLIAKWVLFQLGPVLSLGLPKVVEELLLRTFRLPPALIKADYRRLYDFFYQSSEVVFEEADRLGISREEACHNLLFTTCFNSFGGMKIFFPNMIKWIGRAGVNLHTQLAREIRTAVKANGGKITMRAMEQMPLMKSVVYEAFRIEPPVPVQYGRAKKDLVVESHDAAFEIKEGEVICGYQPFATRDPKIFDRADEFVPDRFTGDGEELLKHVLWSNGPETQSPTVQNKQCAGKDFIVFVSRLLVVELFLRYDSFDIEAANTPLGAAVTVTSLKKASF | 532 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 8 | 28558404 | 28560002 | + | CcPI632755_08g017260.1 | Cco08g1726 | 186200 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cco08g1726 | 532 | SUPERFAMILY | Cytochrome P450 | 67 | 507 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco08g1726 | 532 | MobiDBLite | consensus disorder prediction | 44 | 72 | - | - | |
| Cco08g1726 | 532 | Gene3D | Cytochrome P450 | 63 | 532 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco08g1726 | 532 | Pfam | Cytochrome P450 | 361 | 459 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco08g1726 | 532 | FunFam | Allene oxide synthase, chloroplastic | 67 | 532 | - | - | |
| Cco08g1726 | 532 | PANTHER | CYTOCHROME P450 26 | 71 | 506 | - | GO:0009535(PANTHER)|GO:0009695(PANTHER)|GO:0009941(PANTHER)|GO:0016125(PANTHER)|GO:0016491(PANTHER) | |
| Cco08g1726 | 532 | CDD | CYP74 | 101 | 525 | - | - | |
| Cco08g1726 | 532 | PRINTS | E-class P450 group IV signature | 386 | 402 | IPR002403 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco08g1726 | 532 | PRINTS | E-class P450 group IV signature | 439 | 457 | IPR002403 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco08g1726 | 532 | PRINTS | E-class P450 group IV signature | 485 | 503 | IPR002403 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cco02g0214 | Cco-Chr2:2061968 | Cco08g1726 | Cco-Chr8:28558404 | 2.80E-105 | dispersed | |
| Cco02g0598 | Cco-Chr2:5822504 | Cco08g1726 | Cco-Chr8:28558404 | 9.50E-146 | dispersed | |
| Cco02g0597 | Cco-Chr2:5813008 | Cco08g1726 | Cco-Chr8:28558404 | 6.00E-148 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cco08g1726 | K01723 | - | csv:101221732 | 984.171 |