Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cco08g1821 | ATGAAAATGAAGATGCAAACTTGCAGACTTTCACAATGGTTTCTTCTGTTTTTGATTTCATTCTGTTCATGTTCATTTACAGAAGCACAAAAGAGCAATCAGCAGTTGAAGAAGAAGACTTACATAATTCACATGGACAAAAGCAATATGCCACAAGCCTTTGATGATCATTTCCAGTGGTATGATTCTTCTTTGAAATCAGTTTCTGATTCAGCCCAAATGCTTTATTCCTACAACACAGTTGTTCATGGCTTCTCCACAAGATTGACCGTCGAGGAGGCTAAGTTAATAGAAAAGCAAGAAGGAATTCTTGCTGTCATACCTGAAGTGAAGTATGAGCTTCATACCACTCGAACGCCTGAGTTTCTTGGACTTGGGAAAAGTGTTTCTTTCTTCCCGGCGTCGGAGAAGGTCGGGGAAGTGATCATTGGAGTTCTCGACACCGGTGTATGGCCTGAATTGGAGAGCTTCAATGATAGAGGGCTTGGACCAGTACCTGCAAGCTGGAAAGGTGAGTGTGAAGTGGGTAAAAACTTCACCTCATCTAGTTGTAACAGGAAATTGATAGGAGCCAGGTACTTTTCCAAGGGCTATGAAGCAGCCTTTGGTGCAATTGATGAATCCCAGGAGTCGAAATCGCCAAGGGACGACGATGGCCATGGTTCTCACACGTCAACAACCGCTGCAGGATCCGCCGTGACGGGTGCCAGCCTCTTTGGCTTTGCTGCAGGGACTGCAAGAGGAATGGCGGCTGAAGCTCGGGTTGCGACATATAAGGTATGTTGGCTTGGAGGGTGTTTCGGCACTGACATTTTAGCTGCAATGGATAAGGCTGTTGAAGATGGCGTCAATGTTCTATCCACGTCGCTTGGTGGATCCGCCCCTGATTACTACAGAGACAATGTTGCCATTGGAGCCTTCTCTGCTGCAGCTCTGGGAATTTTTGTGTCATGTTCTGCTGGAAATGGTGGCCCATCCTCAGGTAGCTTGTCCAATGTGGCGCCATGGATAACCACGGTCGGCGCCGGGACGCTGGACAGAGACTTCCCAGCATATGTTACTCTTGGAAATGGGAAGAAGATCACAGGGGAGTCGCTCTACAGTGGAAAGCCTTTGCCGAACTCTTTACTACCAATTGTATATGCAGGCAATGCGAGTAACTCAACCAGTGGTAGCCTTTGTTTGAGCAGTACTCTGAATCCGGCGAAGGTGGCCGGAAAAATAGTCGTGTGTGACAGAGGAGGGAACTCTCGAGTTCAGAAAGGGTTGGTGGTAAAAGAGGCCGGTGGTGTAGGGATGATTCTAGCCAACACTGAAACATATGGGGAAGAACAATTAGCCGATGCACATCTCTTGCCGACGGCGGCCGTTGGCCAAAAATCTGGCGACGCAATAAAGAGCTACATCATCTCCGACGCTAACCCAACAGCAACAATCAGCAGCGGCACCACAAGATTAGGCGTTCAACCGTCGCCGCTGGTGGCAGCATTCAGTTCTCGTGGCCCTAATCTCCTCACTCCACATATTCTCAAACCCGATTTGATAGCACCGGGAGTGAACATTCTGGCTGGATGGACCGGCGGCGCTGGACCAACTGGTTTAGACAGCGATAAGCGGCACGTGGCCTTCAACATCATCTCCGGCACATCAATGTCGTGCCCTCACATCAGTGGATTAGCCGCTCTTCTTAAAGCTGCTCATCCAGATTGGAGCCCAGCTGCCATTAGATCTGCCCTAATGACCACAGCATACTCAACATACAAAAATGGCGAAGCGATTCAAGACGTATCCAACGGATCACCGTCGACGCCGTTCGATGTCGGAGCCGGACATGTAAATCCAACGGCTGCCCTTGATCCCGGCCTTGTTTACGATACCACCACCGACGATTACTTCGCCTTCCTCTGTGCCCTAAACTACAGCTCACTTCAAATTAAAGTAATCAGCAAGAAAGACTTCACCTGTAATAGAAACAAGAACTACAAATTGGAGGATCTGAACTACCCGTCATTTGCAGTTCCACTAGAAACCCCTTCCACCAAAGGAGGTGAAGACGTCGCTCCGACCACCGTAAAATATACAAGGACTCTGACCAACAAGGGTGCTCCATCGACGTATAAGGTCTCAGTGACGGCGAAAAGTCCATCGGTGAAGATTGTGGTTGAACCGGAATCATTGAGTTTTGCAGAGGCAAATGAGCAAAAGAGTTATACAGTGACATTCATTGCTTCTCCAATGCCGTCGGGATCTGAGAGCTTTGCTCGTCTGGAATGGTCAGATGGGAAACACATTGTGGGCAGCCCCATAGCTTTCACCTGGACTTAA | 2325 | 48.65 | MKMKMQTCRLSQWFLLFLISFCSCSFTEAQKSNQQLKKKTYIIHMDKSNMPQAFDDHFQWYDSSLKSVSDSAQMLYSYNTVVHGFSTRLTVEEAKLIEKQEGILAVIPEVKYELHTTRTPEFLGLGKSVSFFPASEKVGEVIIGVLDTGVWPELESFNDRGLGPVPASWKGECEVGKNFTSSSCNRKLIGARYFSKGYEAAFGAIDESQESKSPRDDDGHGSHTSTTAAGSAVTGASLFGFAAGTARGMAAEARVATYKVCWLGGCFGTDILAAMDKAVEDGVNVLSTSLGGSAPDYYRDNVAIGAFSAAALGIFVSCSAGNGGPSSGSLSNVAPWITTVGAGTLDRDFPAYVTLGNGKKITGESLYSGKPLPNSLLPIVYAGNASNSTSGSLCLSSTLNPAKVAGKIVVCDRGGNSRVQKGLVVKEAGGVGMILANTETYGEEQLADAHLLPTAAVGQKSGDAIKSYIISDANPTATISSGTTRLGVQPSPLVAAFSSRGPNLLTPHILKPDLIAPGVNILAGWTGGAGPTGLDSDKRHVAFNIISGTSMSCPHISGLAALLKAAHPDWSPAAIRSALMTTAYSTYKNGEAIQDVSNGSPSTPFDVGAGHVNPTAALDPGLVYDTTTDDYFAFLCALNYSSLQIKVISKKDFTCNRNKNYKLEDLNYPSFAVPLETPSTKGGEDVAPTTVKYTRTLTNKGAPSTYKVSVTAKSPSVKIVVEPESLSFAEANEQKSYTVTFIASPMPSGSESFARLEWSDGKHIVGSPIAFTWT | 774 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 29245173 | 29247497 | - | CcPI632755_08g018210.1 | Cco08g1821 | 186295 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cco08g1821 | 774 | PRINTS | Subtilisin serine protease family (S8) signature | 547 | 563 | IPR015500 | - | |
Cco08g1821 | 774 | PRINTS | Subtilisin serine protease family (S8) signature | 216 | 229 | IPR015500 | - | |
Cco08g1821 | 774 | PRINTS | Subtilisin serine protease family (S8) signature | 138 | 157 | IPR015500 | - | |
Cco08g1821 | 774 | Pfam | Subtilase family | 140 | 594 | IPR000209 | GO:0006508(InterPro)|GO:0008236(InterPro) | |
Cco08g1821 | 774 | Pfam | PA domain | 378 | 465 | IPR003137 | - | |
Cco08g1821 | 774 | ProSiteProfiles | Serine proteases, subtilase domain profile. | 111 | 618 | - | - | |
Cco08g1821 | 774 | FunFam | Subtilisin-like protease SBT1.5 | 140 | 357 | - | - | |
Cco08g1821 | 774 | ProSitePatterns | Serine proteases, subtilase family, serine active site. | 548 | 558 | IPR023828 | - | |
Cco08g1821 | 774 | FunFam | Subtilisin-like protease SBT1.9 | 29 | 115 | - | - | |
Cco08g1821 | 774 | Pfam | Peptidase inhibitor I9 | 40 | 115 | IPR010259 | - | |
Cco08g1821 | 774 | MobiDBLite | consensus disorder prediction | 206 | 228 | - | - | |
Cco08g1821 | 774 | CDD | PA_subtilisin_like | 352 | 479 | - | - | |
Cco08g1821 | 774 | ProSiteProfiles | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 24 | - | - | |
Cco08g1821 | 774 | SUPERFAMILY | Subtilisin-like | 114 | 622 | IPR036852 | GO:0004252(InterPro)|GO:0006508(InterPro) | |
Cco08g1821 | 774 | Gene3D | Peptidase S8 propeptide/proteinase inhibitor I9 | 23 | 115 | IPR037045 | - | |
Cco08g1821 | 774 | Gene3D | - | 635 | 773 | - | - | |
Cco08g1821 | 774 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN | 40 | 769 | IPR045051 | - | |
Cco08g1821 | 774 | FunFam | subtilisin-like protease SBT1.5 | 346 | 486 | - | - | |
Cco08g1821 | 774 | CDD | Peptidases_S8_3 | 112 | 584 | IPR034197 | - | |
Cco08g1821 | 774 | Gene3D | Peptidase S8/S53 domain | 141 | 631 | IPR036852 | GO:0004252(InterPro)|GO:0006508(InterPro) | |
Cco08g1821 | 774 | Gene3D | - | 346 | 486 | - | - | |
Cco08g1821 | 774 | SUPERFAMILY | PA domain | 399 | 466 | IPR046450 | - | |
Cco08g1821 | 774 | Pfam | Fibronectin type-III domain | 665 | 770 | IPR041469 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cco05g0916 | Cco-Chr5:7916287 | Cco08g1821 | Cco-Chr8:29245173 | 3.30E-233 | dispersed | |
Cco08g1821 | Cco-Chr8:29245173 | Cco09g0103 | Cco-Chr9:902807 | 3.50E-214 | dispersed | |
Cco02g0322 | Cco-Chr2:2939845 | Cco08g1821 | Cco-Chr8:29245173 | 7.70E-171 | transposed | |
Cco04g1491 | Cco-Chr4:30320425 | Cco08g1821 | Cco-Chr8:29245173 | 8.20E-301 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cco08g1821 | - | - | - | 0.0 |