Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco08g1958 ATGCGCTCCACTTCCCAATTCCCTCCCAAGTCCTTCCTTTCATCTGACAATCCCATCCTTCCCCTCCATTACCACACCTTGCTTTCCTCCACCAACTTCCGCGATCGGATTCCTGTCTTCGGATCCCATGACTTGGTTTCCACTACTTCCGCCATATCCCAACCCCAACCACCTTCCACTACTCCAGATTTCCCACTCCCAGAAGATGCTCTCACCCTCACCAAGGCCAAAATTCTCTCTCATCCTACCTATCCTCGTTTGCTTCAAGCTTATATTGACTGCCAGAAGGTTGGAGCTCCTCCGGAGATAGCTTGCTTGTTGGAGGAAATCCGGCGAGAAAACGACAGTCACAAACAAAACGCCATCTCCACGTGCTTTGGAGCCGATCCCGAGCTCGATGAATTCATGGAAGCGTACTGTGACATGCTGGTGAAGTATAAATCAGATCTCTCGAGGCCCTTTCATGAAGCTTCTTCCTTCTTGAACAGCATTCAACTGCAACTTAGCGACCTCTGCGCTGGTGCTTCCACCAGAACCCCTTCCATTTAA 549 50.27 MRSTSQFPPKSFLSSDNPILPLHYHTLLSSTNFRDRIPVFGSHDLVSTTSAISQPQPPSTTPDFPLPEDALTLTKAKILSHPTYPRLLQAYIDCQKVGAPPEIACLLEEIRRENDSHKQNAISTCFGADPELDEFMEAYCDMLVKYKSDLSRPFHEASSFLNSIQLQLSDLCAGASTRTPSI 182
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 30396695 30398309 - CcPI632755_08g019580.1 Cco08g1958 186432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco08g1958 182 PANTHER FUSED COMPOUND LEAF 1 68 176 - -
Cco08g1958 182 SMART KNOX2_2 122 173 IPR005541 GO:0003677(InterPro)|GO:0005634(InterPro)
Cco08g1958 182 Pfam KNOX2 domain 126 172 IPR005541 GO:0003677(InterPro)|GO:0005634(InterPro)
Cco08g1958 182 Pfam KNOX1 domain 75 115 IPR005540 GO:0003677(InterPro)|GO:0005634(InterPro)
Cco08g1958 182 SMART KNOX1_2 72 116 IPR005540 GO:0003677(InterPro)|GO:0005634(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco08g1958 Cco-Chr8:30396695 Cco05g2818 Cco-Chr5:35868572 2.30E-55 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco08g1958 - - - 0.0