Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cco08g1958 | ATGCGCTCCACTTCCCAATTCCCTCCCAAGTCCTTCCTTTCATCTGACAATCCCATCCTTCCCCTCCATTACCACACCTTGCTTTCCTCCACCAACTTCCGCGATCGGATTCCTGTCTTCGGATCCCATGACTTGGTTTCCACTACTTCCGCCATATCCCAACCCCAACCACCTTCCACTACTCCAGATTTCCCACTCCCAGAAGATGCTCTCACCCTCACCAAGGCCAAAATTCTCTCTCATCCTACCTATCCTCGTTTGCTTCAAGCTTATATTGACTGCCAGAAGGTTGGAGCTCCTCCGGAGATAGCTTGCTTGTTGGAGGAAATCCGGCGAGAAAACGACAGTCACAAACAAAACGCCATCTCCACGTGCTTTGGAGCCGATCCCGAGCTCGATGAATTCATGGAAGCGTACTGTGACATGCTGGTGAAGTATAAATCAGATCTCTCGAGGCCCTTTCATGAAGCTTCTTCCTTCTTGAACAGCATTCAACTGCAACTTAGCGACCTCTGCGCTGGTGCTTCCACCAGAACCCCTTCCATTTAA | 549 | 50.27 | MRSTSQFPPKSFLSSDNPILPLHYHTLLSSTNFRDRIPVFGSHDLVSTTSAISQPQPPSTTPDFPLPEDALTLTKAKILSHPTYPRLLQAYIDCQKVGAPPEIACLLEEIRRENDSHKQNAISTCFGADPELDEFMEAYCDMLVKYKSDLSRPFHEASSFLNSIQLQLSDLCAGASTRTPSI | 182 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 30396695 | 30398309 | - | CcPI632755_08g019580.1 | Cco08g1958 | 186432 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cco08g1958 | 182 | PANTHER | FUSED COMPOUND LEAF 1 | 68 | 176 | - | - | |
Cco08g1958 | 182 | SMART | KNOX2_2 | 122 | 173 | IPR005541 | GO:0003677(InterPro)|GO:0005634(InterPro) | |
Cco08g1958 | 182 | Pfam | KNOX2 domain | 126 | 172 | IPR005541 | GO:0003677(InterPro)|GO:0005634(InterPro) | |
Cco08g1958 | 182 | Pfam | KNOX1 domain | 75 | 115 | IPR005540 | GO:0003677(InterPro)|GO:0005634(InterPro) | |
Cco08g1958 | 182 | SMART | KNOX1_2 | 72 | 116 | IPR005540 | GO:0003677(InterPro)|GO:0005634(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cco08g1958 | Cco-Chr8:30396695 | Cco05g2818 | Cco-Chr5:35868572 | 2.30E-55 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cco08g1958 | - | - | - | 0.0 |