Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cco09g0055 | ATGAGCGAAGAAGAACCTCCCAAGCTCTACGCCAACAAACCCAAGAAAGCCCAGGTCAAACAATTTCAAGAACAGCACAAAGTCAGAGACGCTTCTTCTTCTTCACCAGCGCCACCAGCATCATCGAACATGGCATCCCCGTCTTCTTCTCCTTCAGCGCCGCAGCCTCCGAAGGAATCATTTGCTAGGCGATATAAGTTCTTATGGCCCATGCTTTTGACTGTCAACCTTGCTGTCGGAGCTTATCTGTTTATGAGAACAAAGAAGCAAGATGAACATGTAGCTGATGAAGAAGCTGCCCCGGATTCAGCCAAAATCACCAAGATTGCTGCTCCTGTTGTTGAGGAATCATTAGCCAGACCAGCCATTGTGGAGCCTGTGAAGGTAAGAGAACCAATTCCGGTGGACCAGCAGCGTGAACTTTTCAAGTGGATTTTGGAAGAGAAGCGCAAGATAAAGCCGAAGGATCGTGAAGAGAAGAAACGCATTGATGAAGAGAAAGCAATTCTCAAAGAGAACTGCTTTAGACTTCTCAGATCAAAATTCTGCAACAAACTCCCTTTGGGATCTCTTGGCTGGCCTTTCATTGGTGAGACTATTGAGTTCATCTCCTGTGCTTATTCGGACCGTCCCGAAACCTTCATGGACAAGCGTCGCCGCCTCTATGGGAAGGTGTTCAAGTCACATATTTTTGGAAGTCCTACCATTGTTTCTACTGATGCAGAAGTCAGTAAGTTCATTCTGCAAAGTGATGCCAAGGCTTTTGTACCATCTTATCCGAAATCTTTAACAGAATTGATGGGGAAGTCCTCTATTTTGCTGATAAATGGGAGCTTGCAGAAGAGAGTTCATGGTCTTGTGGGAGCTTTCTTCAAGTCTTCACATCTCAAAGCTCAAATAACCAAGGATATGGAGTGTTATGTCAAACTATCAATGGCAAATTGGACTGAGAACAATCCTATTTACCTTCAAGATGAAACCAAAAATATTTCCTTTCAAGTATTAGTAAAGATATTGATTAGTTTACATCCTGGTCAAAGGATGGAGTTTCTCAAGAAACAGTTTCAAGAATTCATAGCTGGGCTCATGGCTTTGCCAGTGAACATACCTGGAAGCAGGCTTTACCAATCCTTGCAGGCCAAAAGGAATATGGTCAAACTAGTAAAGAAGATAATACAAGAGAGAAAAAGCTGTGGAATTTCCCCTGTCCCAAAAGATGTCATGGAAGTTTTGCTTAAAGATGAAAATGAAGAACTAACAGATGATCTAATAGCAGAGAACATGATTGACATGATGATTCCTGGGGAAGATTCAGTGCCAATCTTAATGACTCTTGCAGTAAAATACCTCTCGGATTGCCCTGCCGCACTTCAACAATTAACTGAGGAAAACTTGAAGATGAAAGGACTGAAAGAGCAGCTTGGTGAGGCATTGCATTGGAGCGATTACTTATCGATGCCGTTTACGCAGAGTGTGATCACTGAGACATTAAGGATGGGAAATATTATAATTGGGGTGATGCGTAAGGCCATGAAAGACATGAAGATAAAAGGATACCTAATACCTAAGGGTTGGTCAGTGCTTACATACTTTAGATCTGTTCATCTTGACCACAATCACTATGACTGCCCTTACAAGTTCAATCCATGGAGGTGGCAAGACAGAGACTTGAGTAGTTGTAACTTCACTCCTTTTGGAGGTGGACAAAGACTATGCCCTGGACTTGACTTAGCCAGGCTTGAAGCTTCCATCTTCCTTCACCACTTTGTCACTCACTTCAGATGGATTGCTGAGGAAGATAGAATCATAAACTTCCCCACAGTGAGGATGAAGAAAAGGATGCCAGTTTGGGTGAAGAGAAAAAGGGACCCATAA | 1875 | 42.93 | MSEEEPPKLYANKPKKAQVKQFQEQHKVRDASSSSPAPPASSNMASPSSSPSAPQPPKESFARRYKFLWPMLLTVNLAVGAYLFMRTKKQDEHVADEEAAPDSAKITKIAAPVVEESLARPAIVEPVKVREPIPVDQQRELFKWILEEKRKIKPKDREEKKRIDEEKAILKENCFRLLRSKFCNKLPLGSLGWPFIGETIEFISCAYSDRPETFMDKRRRLYGKVFKSHIFGSPTIVSTDAEVSKFILQSDAKAFVPSYPKSLTELMGKSSILLINGSLQKRVHGLVGAFFKSSHLKAQITKDMECYVKLSMANWTENNPIYLQDETKNISFQVLVKILISLHPGQRMEFLKKQFQEFIAGLMALPVNIPGSRLYQSLQAKRNMVKLVKKIIQERKSCGISPVPKDVMEVLLKDENEELTDDLIAENMIDMMIPGEDSVPILMTLAVKYLSDCPAALQQLTEENLKMKGLKEQLGEALHWSDYLSMPFTQSVITETLRMGNIIIGVMRKAMKDMKIKGYLIPKGWSVLTYFRSVHLDHNHYDCPYKFNPWRWQDRDLSSCNFTPFGGGQRLCPGLDLARLEASIFLHHFVTHFRWIAEEDRIINFPTVRMKKRMPVWVKRKRDP | 624 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 9 | 478274 | 487486 | - | CcPI632755_09g000550.1 | Cco09g0055 | 186512 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cco09g0055 | 624 | Pfam | Cytochrome P450 | 188 | 601 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco09g0055 | 624 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 565 | 574 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Cco09g0055 | 624 | Coils | Coil | 457 | 477 | - | - | |
| Cco09g0055 | 624 | PRINTS | E-class P450 group I signature | 490 | 508 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco09g0055 | 624 | PRINTS | E-class P450 group I signature | 530 | 554 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco09g0055 | 624 | PRINTS | E-class P450 group I signature | 572 | 595 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco09g0055 | 624 | PRINTS | E-class P450 group I signature | 562 | 572 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco09g0055 | 624 | PRINTS | E-class P450 group I signature | 219 | 238 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco09g0055 | 624 | Gene3D | Cytochrome P450 | 179 | 621 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco09g0055 | 624 | CDD | CYP90-like | 218 | 616 | - | - | |
| Cco09g0055 | 624 | FunFam | 3-epi-6-deoxocathasterone 23-monooxygenase CYP90D1 | 177 | 621 | - | - | |
| Cco09g0055 | 624 | PANTHER | CYTOCHROME P450 26 | 185 | 597 | - | GO:0004497(PANTHER)|GO:0007275(PANTHER)|GO:0010268(PANTHER)|GO:0016125(PANTHER)|GO:0016132(PANTHER)|GO:0016491(PANTHER)|GO:0016709(PANTHER) | |
| Cco09g0055 | 624 | MobiDBLite | consensus disorder prediction | 28 | 49 | - | - | |
| Cco09g0055 | 624 | MobiDBLite | consensus disorder prediction | 1 | 57 | - | - | |
| Cco09g0055 | 624 | SUPERFAMILY | Cytochrome P450 | 184 | 620 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cco09g0055 | Cco-Chr9:478274 | Cco10g0358 | Cco-Chr10:4127813 | 7.70E-71 | dispersed | |
| Cco04g1757 | Cco-Chr4:32550764 | Cco09g0055 | Cco-Chr9:478274 | 3.90E-137 | transposed | |
| Cco06g0416 | Cco-Chr6:4522798 | Cco09g0055 | Cco-Chr9:478274 | 1.70E-81 | transposed | |
| Cco07g0983 | Cco-Chr7:22659311 | Cco09g0055 | Cco-Chr9:478274 | 2.20E-89 | transposed | |
| Cco11g0504 | Cco-Chr11:5313500 | Cco09g0055 | Cco-Chr9:478274 | 1.40E-85 | transposed | |
| Cco07g1443 | Cco-Chr7:28529488 | Cco09g0055 | Cco-Chr9:478274 | 8.50E-190 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cco09g0055 | K12638 | - | csv:101217830 | 840.106 |