Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco09g0103 ATGGCGAATTTACATCGCTCTTCTTCACTTTTCTTCTTCTTCATCTTCTGTTTCGTCCCTGTAATTTTCTCTCGATCGCCGGATAATCAAGAGACATTCATAATTCATGTCTCTAAATCGGAGAAGCCTTCTTTATTTTCCTCCCATCGTCACTGGCACTCTTCCATTCTCGAATCACTCTCTCCTTCTCCTCATCCGACGAAGCTTCTTTACAACTACGAACATGCCGTTAATGGATTCTCCGCACGCATCACGGCTGCTCAGGCGGCGGAGCTGCGTCATGTTCCCGGTGTTATTTCGGTGATTCCTGATCGGATCCGTCAGCTTCATACGACTCGGACGCCTCATTTCTTGGGACTGGCGGATAACCTAGGGCTCTGGCCTGACACGAATTATGCCGAAGATGTGATTATTGGCGTTCTTGATACCGGAATTTGGCCGGAGAGGCCGAGTTTCTCCGATGAAGGTTTGTCTCCGGTTCCGGCAAGCTGGAAAGGCACCTGCGAGGCTGGGGAGGGATTTTCGGCTTCGACCTGTAATCGGAAGATTATTGGTGCGAGAGCGTACTTTAACGGATACGAGTCTAATTTAGGAAGATCGCTTCGTTCTTCGGATTTCAAATCTGCTAGGGATTCGGATGGCCATGGAACTCACACGGCCTCTACGGCTGCAGGTTCGTTCGTTAAAAATGCTAGTTTTTTCCAATACGCTCGTGGAGAAGCCAGAGGAATGGCGAGTAGAGCTCGTATCGCTGCCTACAAGATCTGCTGGGAATTTGGTTGTTTCGATTCTGACATACTCGCCGCTATGGATCAGGCGATTGCCGATGGCGTTCACATCATCTCTCTCTCAGTCGGATCCTCGGGCCGTGCGCCCGAGTACTATCGAGATTCCATCGCAATTGGAGCGTTTGGGGCAATGCAGCACGGTGTCGTCGTCTCTTGCTCCGCCGGTAATTCCGGTCCCGGTCCTTACACGGCTGTGAACATCGCTCCTTGGATCCTCACCGTCGGTGCCTCCACAATCGACAGGGAGTTTCTTGCCGATGTCATTCTCGGAGACGGCAGGGTTTTCAGCGGCGTGTCGCTGTACTCCGGCGAACCCCTTGGCGATTCCAAGCTTCCGTTGGTCTACGGTGGAGATTGCGGTAGCAGGTATTGTTATTCTGGATCCCTCGATCCGGCGAAAGTCGCAGGAAAAATTGTCGTGTGCGACCGAGGAGGGAACGCCAGAGTCGCCAAAGGAGGCGCAGTGAAGTCCGCCGGTGGTCTTGGTATGGTACTCGCCAATACGGAGGAAAACGGCGAAGAGCTCTTAGCAGATTCTCATCTTATTCCAGGAACAATGGTCGGTGAAATCGCCGGCAACAAGCTTAGAAACTACATCCATTCGGATCCGAATCCAACTGCTACAATCGTGTTTCGAGGAACTGTCATTGGCAATTCGCCTTCAGCTCCGAGAGTCGCCGCCTTCTCCAGCCGTGGTCCGAACTACCGGACGGCAGAGATTCTAAAACCAGATGTTATAGCTCCGGGAGTTAACATTTTGGCCGGCTGGAGCGGCTACAGCAGTCCGACCAGTCTAAGCATCGATTCTCGAAGAGTCGAGTTCAATATCATCTCCGGAACTTCAATGTCTTGCCCTCACGTCAGTGGCGTCGCCGCCTTGCTCCGTAAGGCTTTTCCGACGTGGTCACCGGCTGCTATCAAATCTGCTCTGATCACTACTTCTTACTCTTTGGACAGTTCCGGCAGCCCAATCAAAGATCTCTCCACCAGCAAAGAATCAAATCCATTCGTCCATGGCGCCGGCCACATCGATCCCAACAAAGCTCTGAATCCAGGCCTGATTTATGATCTCACTCCTCAAGACTACGTTTCATTTCTCTGCTCAATCGGTTACGACTCTAGACAAATAGCTGTTTTCGCGAAGGATTCTTCGTACTCCCAACTATGTGAGCACAAACTGAGCAATCCAGGCAACCTGAATTACCCATCATTCTCCGTCGTGTTCGACGGCGAGGAGGTGGTGAAATATACTAGAACAGTGACAAATGTAGGAGATGAAACTGATGTTTATGAAGTGAAAGTAGAATCCCCACAAGGAGTTGAAATCAGTGTTGTTCCAAACAAGCTGGAGTTCAATGCAAAGAAGACAACACAGTCTTATGAGATTACATTCACCAAAATCAGTGGATTCAAGGAATCAGCAAGCTTCGGATCAATTCAATGGAGTGATGGAAGCCACAATGTTAGGAGTCCAATTGCTGTCTCGTTCAACACTGGATCCATAGCTTCGATGTAA 2304 50.22 MANLHRSSSLFFFFIFCFVPVIFSRSPDNQETFIIHVSKSEKPSLFSSHRHWHSSILESLSPSPHPTKLLYNYEHAVNGFSARITAAQAAELRHVPGVISVIPDRIRQLHTTRTPHFLGLADNLGLWPDTNYAEDVIIGVLDTGIWPERPSFSDEGLSPVPASWKGTCEAGEGFSASTCNRKIIGARAYFNGYESNLGRSLRSSDFKSARDSDGHGTHTASTAAGSFVKNASFFQYARGEARGMASRARIAAYKICWEFGCFDSDILAAMDQAIADGVHIISLSVGSSGRAPEYYRDSIAIGAFGAMQHGVVVSCSAGNSGPGPYTAVNIAPWILTVGASTIDREFLADVILGDGRVFSGVSLYSGEPLGDSKLPLVYGGDCGSRYCYSGSLDPAKVAGKIVVCDRGGNARVAKGGAVKSAGGLGMVLANTEENGEELLADSHLIPGTMVGEIAGNKLRNYIHSDPNPTATIVFRGTVIGNSPSAPRVAAFSSRGPNYRTAEILKPDVIAPGVNILAGWSGYSSPTSLSIDSRRVEFNIISGTSMSCPHVSGVAALLRKAFPTWSPAAIKSALITTSYSLDSSGSPIKDLSTSKESNPFVHGAGHIDPNKALNPGLIYDLTPQDYVSFLCSIGYDSRQIAVFAKDSSYSQLCEHKLSNPGNLNYPSFSVVFDGEEVVKYTRTVTNVGDETDVYEVKVESPQGVEISVVPNKLEFNAKKTTQSYEITFTKISGFKESASFGSIQWSDGSHNVRSPIAVSFNTGSIASM 767
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 902807 905110 - CcPI632755_09g001030.1 Cco09g0103 186560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco09g0103 767 SUPERFAMILY Subtilisin-like 109 616 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cco09g0103 767 FunFam Subtilisin-like protease SBT1.9 22 110 - -
Cco09g0103 767 Pfam Fibronectin type-III domain 661 757 IPR041469 -
Cco09g0103 767 Pfam PA domain 374 458 IPR003137 -
Cco09g0103 767 FunFam Subtilisin-like protease SBT1.5 629 760 - -
Cco09g0103 767 Pfam Subtilase family 135 590 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Cco09g0103 767 CDD PA_subtilisin_like 349 472 - -
Cco09g0103 767 FunFam subtilisin-like protease SBT1.5 343 479 - -
Cco09g0103 767 Pfam Peptidase inhibitor I9 32 110 IPR010259 -
Cco09g0103 767 CDD Peptidases_S8_3 108 578 IPR034197 -
Cco09g0103 767 Gene3D - 343 480 - -
Cco09g0103 767 Gene3D Peptidase S8/S53 domain 135 625 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cco09g0103 767 ProSiteProfiles Serine proteases, subtilase domain profile. 108 612 - -
Cco09g0103 767 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 33 755 IPR045051 -
Cco09g0103 767 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 22 110 IPR037045 -
Cco09g0103 767 ProSitePatterns Serine proteases, subtilase family, serine active site. 542 552 IPR023828 -
Cco09g0103 767 Gene3D - 629 760 - -
Cco09g0103 767 FunFam Subtilisin-like protease SBT1.5 135 355 - -
Cco09g0103 767 SUPERFAMILY PA domain 363 465 IPR046450 -
Cco09g0103 767 PRINTS Subtilisin serine protease family (S8) signature 541 557 IPR015500 -
Cco09g0103 767 PRINTS Subtilisin serine protease family (S8) signature 133 152 IPR015500 -
Cco09g0103 767 PRINTS Subtilisin serine protease family (S8) signature 211 224 IPR015500 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco01g0344 Cco-Chr1:3453942 Cco09g0103 Cco-Chr9:902807 9.00E-170 dispersed
Cco07g0706 Cco-Chr7:12620244 Cco09g0103 Cco-Chr9:902807 1.30E-200 dispersed
Cco07g0708 Cco-Chr7:12665285 Cco09g0103 Cco-Chr9:902807 1.30E-195 dispersed
Cco08g1821 Cco-Chr8:29245173 Cco09g0103 Cco-Chr9:902807 3.50E-214 dispersed
Cco08g1831 Cco-Chr8:29337385 Cco09g0103 Cco-Chr9:902807 1.30E-139 dispersed
Cco09g0103 Cco-Chr9:902807 Cco09g0134 Cco-Chr9:1183102 1.20E-201 dispersed
Cco01g1380 Cco-Chr1:24653082 Cco09g0103 Cco-Chr9:902807 6.60E-128 transposed
Cco04g2195 Cco-Chr4:35587914 Cco09g0103 Cco-Chr9:902807 9.10E-162 transposed
Cco05g1784 Cco-Chr5:26485470 Cco09g0103 Cco-Chr9:902807 8.60E-149 transposed
Cco07g0867 Cco-Chr7:20116718 Cco09g0103 Cco-Chr9:902807 4.40E-135 transposed
Cco08g1223 Cco-Chr8:23940209 Cco09g0103 Cco-Chr9:902807 1.40E-125 transposed
Cco03g1557 Cco-Chr3:30197602 Cco09g0103 Cco-Chr9:902807 5.70E-217 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco09g0103 - - - 0.0