Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco09g0134 ATGGCTGCTCTTCTTCCAGCAATCTTTCTCTTCTCTCTCATCATCCCATTTTCTTCTTCTTCCTCCTCTTCGATCGATGTTTCAAAGAAGACCTTCATTGTGCAGGTTCACAAAGATGCCAAACCTTCTATTTTCCCGACCCACAAGCACTGGTATGAGTCTTCTCTAGCCTCCATTTCTTCAAACAAGGCAACGACGTCAAACCCAGATGCTTCTGGAACTGATGGAGGAGCCATCATTCATACATATGAAACTGTCTTCCATGGCTTCTCTGCAAAGCTCTCACCTTTTGAAGTTGAGAAGCTTCAAACCTTCCCTCACATCGCCTCCATCATCCCCGAACAGGTTCGCCATCCTCACACAACTCGTTCCCCTGAGTTTCTTGGCCTTAAGACATCCGACAGTGCTGGGTTGCTTAAAGAGTCCGACTTTGGATCTGACCTTGTAATAGGTGTCATTGATACTGGTATTTGGCCGGAGAGGCAGAGTTTCAATGACCGCGATCTGGGTCCTATTCCTTCCAAATGGAAAGGCCAGTGCTTGGTAGCTAAAGACTTTCCAGCCACCTCTTGCAACCGTAAACTCATTGGGGCTCGATTCTTCTGTAGTGGGTACGAGGCCACCAATGGAAAGATGAACGAGACCACCGAGTACCGTTCGCCGCGAGATTCCGATGGCCACGGTACACACACAGCGTCCATTGCTGCAGGTCGTTATGTGTTTCCAGCTTCAACTTTAGGTTATGCTCGTGGTAAAGCCGCCGGAATGGCTCCTAAGGCCCGTCTTGCCGCCTATAAAGTCTGCTGGAACGCCGGCTGCTACGACTCCGACATTCTTGCAGCTTTTGATGCTGCCGTTTCCGACGGTGTCGATGTTGTATCACTCAGCGTCGGCGGTGTGGTTGTACCGTATTATCTCGATGCCATCGCTATTGGGGCTTTTAGAGCGGTGGCAGACGGCGTTTTTGTCTCCGCATCAGCCGGTAACGGTGGCCCAGGTGGGCTCACTGTGACTAATGTAGCACCATGGGTTACAACAGTAGGAGCTGGAACCATGGATAGAGATTTTCCTGCTGATGTTAAGCTGGGAAACGGGAGGGTTATACTCGGTACCAGTGTCTACGGCGGACCGGCTTTAGTTCCGGGTCGTTTGTATCCTCTTATTTATGCAGGAACCGAAGGCGGTGATGGATATTCTTCGTCTCTTTGCTTAGAAGGTTCATTGAACCCCAATTTAGTGAAAGGGAAGATTGTACTATGTGACAGGGGCATCAATTCAAGAGCTGCTAAAGGTGAGGTTGTGAAAAAGGCTGGAGGGTTGGGAATGATTTTAGCAAATGGGGTCTTTGACGGTGAGGGTTTGGTAGCTGACTGCCACGTACTACCTGCCACTGCCGTCGGTGCAGCCGGCGGCGACGAGATTCGCAAATATATTGCAGAAGCAGCGAAGTCTCGTTCACCACCAACCGCCACAATTTTGTTCAAGGGAACTCGGCTTGGAGTTCGGCCAGCACCGGTTGTTGCTTCATTTTCAGCTCGAGGTCCTAATCCAGAGTCCCCTGAAATCGTAAAGCCTGATGTGATTGCGCCAGGGTTGAACATTCTTGCCGCTTGGCCTGATAAAATTGGACCCTCTGGAATTCCCACAGACAAGCGTACTACTGAGTTCAACATACTTTCTGGCACTTCCATGGCCTGTCCTCATGTCTCTGGCTTGGCTGCCCTGCTGAAGGCGGCACATCCTGGATGGAGTCCAGCAGCTATAAAATCAGCCTTAATGACCACAGCTTATACTTTGGACAACCGAGGCGAGACGATGTTAGATGAATCTTCAGGCAATACTTCCACGGTCTTGGACTTTGGAGCTGGCCATGTTCACCCACAAAAGGCAATGGACCCTGGTTTAATCTATGACCTGAACACATATGATTATGTTGATTTCTTGTGTAACTCCAACTACACCACTAAGAATATCCAAGTCATTACAGGGAAGATTGCAGATTGTACTGGGGCGAAAAGGGCTGGACATACTGGGAATTTGAATTACCCTTCATTGTCTGTGGTGTTTCAACAATATGGTAAACATAAGATGTCTACACATTTCATAAGAACTGTGACTAACGTTGGAGACGCCAATTCTATCTATAAGGTATCAATAAAGCCACCAAGTGGAATTTCAGTGACAGTGGAACCAGAAAAGCTAGCGTTTAGAAGGGTTGGGCAAAAATTGAGCTTCTTGGTTAGGGTCCAAGCAATGGCTGTTAGACTTTCCCCTGGAAGCTCTAACATGAAGAGTGGTTCTATAGTTTGGACTGATGGAAAACACGAAGTCACAAGTCCTTTGGTTGTTACCATGCAGCAACCTCTGCAGTAG 2373 48.38 MAALLPAIFLFSLIIPFSSSSSSSIDVSKKTFIVQVHKDAKPSIFPTHKHWYESSLASISSNKATTSNPDASGTDGGAIIHTYETVFHGFSAKLSPFEVEKLQTFPHIASIIPEQVRHPHTTRSPEFLGLKTSDSAGLLKESDFGSDLVIGVIDTGIWPERQSFNDRDLGPIPSKWKGQCLVAKDFPATSCNRKLIGARFFCSGYEATNGKMNETTEYRSPRDSDGHGTHTASIAAGRYVFPASTLGYARGKAAGMAPKARLAAYKVCWNAGCYDSDILAAFDAAVSDGVDVVSLSVGGVVVPYYLDAIAIGAFRAVADGVFVSASAGNGGPGGLTVTNVAPWVTTVGAGTMDRDFPADVKLGNGRVILGTSVYGGPALVPGRLYPLIYAGTEGGDGYSSSLCLEGSLNPNLVKGKIVLCDRGINSRAAKGEVVKKAGGLGMILANGVFDGEGLVADCHVLPATAVGAAGGDEIRKYIAEAAKSRSPPTATILFKGTRLGVRPAPVVASFSARGPNPESPEIVKPDVIAPGLNILAAWPDKIGPSGIPTDKRTTEFNILSGTSMACPHVSGLAALLKAAHPGWSPAAIKSALMTTAYTLDNRGETMLDESSGNTSTVLDFGAGHVHPQKAMDPGLIYDLNTYDYVDFLCNSNYTTKNIQVITGKIADCTGAKRAGHTGNLNYPSLSVVFQQYGKHKMSTHFIRTVTNVGDANSIYKVSIKPPSGISVTVEPEKLAFRRVGQKLSFLVRVQAMAVRLSPGSSNMKSGSIVWTDGKHEVTSPLVVTMQQPLQ 790
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 1183102 1185474 - CcPI632755_09g001340.1 Cco09g0134 186591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco09g0134 790 Pfam Subtilase family 145 612 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Cco09g0134 790 SUPERFAMILY Subtilisin-like 120 635 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cco09g0134 790 Gene3D - 648 786 - -
Cco09g0134 790 PRINTS Subtilisin serine protease family (S8) signature 223 236 IPR015500 -
Cco09g0134 790 PRINTS Subtilisin serine protease family (S8) signature 145 164 IPR015500 -
Cco09g0134 790 PRINTS Subtilisin serine protease family (S8) signature 560 576 IPR015500 -
Cco09g0134 790 Pfam Fibronectin type-III domain 679 783 IPR041469 -
Cco09g0134 790 ProSitePatterns Serine proteases, subtilase family, serine active site. 561 571 IPR023828 -
Cco09g0134 790 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 60 781 IPR045051 -
Cco09g0134 790 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 16 120 IPR037045 -
Cco09g0134 790 Gene3D Peptidase S8/S53 domain 147 644 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cco09g0134 790 FunFam Subtilisin-like protease SBT1.5 147 366 - -
Cco09g0134 790 CDD PA_subtilisin_like 359 492 - -
Cco09g0134 790 CDD Peptidases_S8_3 118 597 IPR034197 -
Cco09g0134 790 ProSiteProfiles Serine proteases, subtilase domain profile. 124 631 - -
Cco09g0134 790 FunFam subtilisin-like protease SBT1.5 353 499 - -
Cco09g0134 790 Pfam Peptidase inhibitor I9 31 120 IPR010259 -
Cco09g0134 790 FunFam Subtilisin-like protease SBT1.9 19 120 - -
Cco09g0134 790 Gene3D - 353 500 - -
Cco09g0134 790 FunFam Subtilisin-like protease SBT1.5 648 786 - -
Cco09g0134 790 Pfam PA domain 385 474 IPR003137 -
Cco09g0134 790 SUPERFAMILY Protease propeptides/inhibitors 30 118 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco02g1285 Cco-Chr2:24506518 Cco09g0134 Cco-Chr9:1183102 6.70E-242 dispersed
Cco09g0103 Cco-Chr9:902807 Cco09g0134 Cco-Chr9:1183102 1.20E-201 dispersed
Cco09g0134 Cco-Chr9:1183102 Cco10g0393 Cco-Chr10:4601647 1.00E-152 dispersed
Cco09g0134 Cco-Chr9:1183102 Cco05g0916 Cco-Chr5:7916287 5.70E-212 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco09g0134 - - - 0.0