Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cco09g0173 | ATGTGGAGGCTTAAGGTGGCAGACGGGGGAAATGACCCTTACATCTATTCTATGAACAACTTTGTAGGAAGGCAAATATGGGAATTCGATCCCAACGCAGGGACCCCTGAAGAGCGGGCCGAAGTCGAACGCGTTCGCAATGAGTTCACCAAAAATCGACTCAAAGGTTTTCCAAGTGCTGACTTGCTTTGGCGCCTCCAGCTTCTGAGAGAGAAGAATTTCAAACAAAGCATCCCACCGGTGAAGGTTGAAGAAGGAGAAGAAATGAGTTACGAAATGGCATGGGATGCAATGAGAAGAGGGGCGCATTTCTTAGCGGCCATACAAGCAAGCGATGGGCATTGGCCCAGCGAAACATCGGGCCCACTATTTTACTTGTGTCCCCTTCTTATTTGCATGTACATAATGGGCTTTATGGATACCGCATTCACTCCCGAGCACAAGAAAGAAATGATGCGTTATGTTTACAACCATCAGAATGAAGATGGTGGATGGGGGTTACACGTTGGTGGTCACAGTAACATGTTCTGCACTACCTTCAATTATATCTCTTTACGTTTACTTGGTGAAGGACCTGATGTTGAGCTAGTTTCCAGAGCCAGAGAATGGATTCGTGATCATGGCGGTGTCACATCCATACTTTCTTGGGGAAAGACGTGGCTCTCGATATTAAACGTGTTCGACTGGTCTGCAAGCAACCCCATGCCTCCTGAATATTGGATGTTTCCCACTTGGGTTCCCATTCATCCATCAAACATGATGTGCTACACTCGGATCACCTACATGCCCATGTCTTACCTATACGGGAAAAGGTTTCAAGCACCTCTAACGCCTCTTGTTTTACAATTAAGAGATGAACTTCACACTCAACCGTACGACCAAATTAATTGGAGAAAAGTTCGTCACATGTGTGCTACGGAAGACCTCTACTTTCCACATCCCATTGTCCAAGACTTGCTTTGGGACACTCTTTACTTGCTAAGTGAACCACTCATGACTCGGTGGCCTTTTAACAAATTGATTCGCCAAAAAGCCCTCAATGAGACTATGAGGCATATTCATTATGAGGATGAAAATAGTCGCTACATCACTATTGGTTGCGTCGAAAAGCCATTATGCATGCTAGCTTGTTGGGTTGAAGATCCTAATAGTGAGTATGTGAAGAAGCATTTTGCGAGAATTCCTGATTATTTATGGATGGCGGAAGATGGCATGAAAATGCAAAGTTTTGGTAGCCAATCATGGGATGCCGCTTTGGCAATGCAAGCGCTGCTTTCTTGTAATATCCCACATGAAATTGGGCCTGCTCTCAACACTGGCCATCAATTCATCAAGAACTCCCAGGTTAGAAACAATCCTCCTGGTGACTACAAAAGTATGTTCCGCTACATGTCTAAAGGATCTTGGACCTTCTCAGACTGTGATCATGGATGGCAAGTTTCTGATTGCACTGCCGAGAATTTGAAGTGTTGTCTACTGCTGTCGTTGCTACCACCTGAAATGGTTGGTGAGAAGATGGAACCTGAACGTTTTTACGATGCTGTTAATGTCATTCTGAACATGCAAAGCAAAAATGGGGGTTTACCAGCCTGGGAGCCAGCGTCAAGTTACTACTGGATGGAGTGGCTGAATCCAGTGGAATTTCTCGAAGATCTAATCATCGAGCACCAGCATGTGGAGTGCACCTCATCTGCGTTGCAAGCAATACTCTTATTTAGGAAACAATACCCAGGACATAGAAGGAAAGAGATCAACAATTTTATCAACAAGGCCGTTCAATTTCTTCAAGATATACAATTGCCTGATGGATCTTGGTATGGGAATTGGGGAATTTGCTATACTTATGGAACGTGGTTCGCACTCAAGGCATTGTCAATGGCGGGAAAGACCTATGAAAATTGTGAGGCGCTTCGGAAAGGAGCTAATTTTCTAATCAAGATACAGAATCAAGAAGGAGGGTTTGGAGAGAGCTACTTGTCATGTCCTTACAAGAGATATATACCGCTGGATGGGAAAAGATCAAATTTGGTGCAAACGGCATGGGGTTTGATGGGTTTGATAAGTGCTGGACAGGCAGATGTAGACCCCACTCCTATTCATCGTGCTGCCAAGTTGTTGATCAATTCTCAAACAGAAGATGGTGATTTTCCACAAGAGGAAATTACTGGAGAATTCTTCAAAAATTGTACTTTACATTTTGCAGCATTTAGAGAAGTATTTCCTGTGATGGCACTAGGAGAATATTGTAATAAGGACCCCGCCCGATGCTCATTCTCATCGTTGACCAGACCCCGGAGAGTGGCACAGTGGTTTGGAATTGGATCAGCCCAAACGCTCTCTATACGTTCCAATTACAGTAGTTTGTTCGAGTTTCACAAGGCCAATCACCCGTTGAAGAAAGCGCAACGAGTAGAAGAGGAAGAAGAAGGACGAAAACTAGAGCCCCAACCCTCTCTCTCAACTTCTCAGAGTTGCAGTAGTCCAAGGTGCATCATTAGTTCATCAGCATTTTTCCCAACTCCATGCTGGAGAACCTTAAATGCTGTTCAACTTAACCCGTCTCATCTCATTATGCACCGGCTTTTGTTTCGAGATTCAATTCTCGTCTCAAAGTTATCGGCTTTACGAGTCAGACCAGGCTTTAGAATTACGTGTTCTATAAACCGCTTTTCCATCATTTTCTGCCTTATTCCAGTTTCCGCGAACTCTGTTTTGTTTTTGGTTTTTTCTTCCTTTGCTTGGGAAATTTCTTTTCGTCCATTCCATCCACTTGACCGCCCCCGAATTTCCAAAATTCAGCGACCAGGGTCCGGGGGCGATTTGCCCCAGGGTGGCGAGTACAACCCTTATCCTATTGCGCGGAGGGTAAATTCCTCCCATACCGTTCTCATGGATGATGACATTGAAAATGCTAGCTTGGGGGTGTACCAAGACAGGCCAAGGACTTTCCCTGATATGCGTAGTAAAGTCAACACCCCATTGATATTTCGAATTATGATGGGGATAAATATTCGTGTTCTCTTAGTACTTCTTCTCTTTGCATTTGGAATAATATTCTACATTGGAGCAAGCACTTCCCCAATTATTGTGTTTGTCTTCTCAATTTGCATCGTCAGCTTCTGCTTTTCGATATATCTCACCAAATGGGTGCTCTCGAAAGATGAAGGGCCACAGGAGATGGCTCAGATTTCAGAGGCAATACGTGATGGGGCAGAAGGTTTCTTTAGGACTCAGTATAGTACCATCTCTAAAATGGCTATGTTACTTGCAGTAGTGATTCTTTGCATATACTTGTTTCGTAGTACTACTCCTCAACAAGAATCTTCCGGAATAGGGAGGTCAACAACTGCTTATATTACTGTTGCAGCATTTCTGTTAGGAGCCTTGTGTTCAGGTATTGCAGGGTATGTTGGAATGTGGGTTTCAGTTCGTGCAAATGTCAGGGTCTCTAGTGCTGCCAGACGGTCTGCAAGGGAGGCATTGCAGATTGCTGTCCGGGCTGGTGGTTTTTCTGCCATAGTTGTTGTTGGCATGGCTGTTATTGGTATAGCCATTCTGTATGCTGCATTTCATGTTTGGTTGGATGTGGGTTTGCCAGGTTCAACCAAGGTTACTGACTTGCCTCTTCTCCTTGTGGGTTATGGTTTTGGAGCTTCTTTTGTTGCCCTATTTGCTCAGTTGGGTGGTGGTATCTATACCAAAGCTGCTGATGTTGGGGCAGACCTTGTCGGAAAAGTTGAGCAGGGAATACCAGAAGATGACCCAAGAAATCCTGCTGTTATTGCAGATCTGGTTGGGGACAATGTGGGCGATTGTGCCGCTCGAGGTGCAGATCTCTTTGAAAGCATAGCTGCTGAAATTATTAGTGCCATGATACTTGGGGGAACAATGGCTGAACGTTGTAAAATTGAAGATCCATCTGGTTTCATTTTATTTCCGCTGGTAGTTCACTCCTTTGATCTGGTGATTTCATCAATTGGCATTCTCTCTATCAGGAGAGGTACTCGTGAATCTGGTGTTAAGGGTCCCATAGAGGATCCAATGACTATTCTGCAGAGAGGATACTCTGTCACTATCGTTCTAGCTGTTCTAACATTTGGCGTGTCTACCCGGTGGTTGCTTCATACTGAACAAGCACCTTCTGCATGGTTCAACTTTGCCTTGTGTGGCTTGGTTGGTATTATAACGGCTTACATTTTTGTCTGGATCACCAAATACTACACTGACTACAAGCATGAGCCCGTGCGTTCATTAGCACTTTCTAGCTCCACAGGCCATGGGACAAACATAATTGCTGGAGTCAGTTTGGGCCTAGAATCAACAGCACTTCCTGTTCTTGTTATTAGTTTTTCTATTGTTTCAGCTTTCTGGTTGGGTCGCACATCAGGACTCGTGGACGAAGCTGGAAATCCAACAGGTGGACTATTTGGTACTGCTGTAGCAACAATGGGAATGCTCAGCACTGCTGCCTATGTTCTCACAATGGATATGTTTGGGCCAATAGCTGATAATGCTGGTGGAATTGTTGAGATGAGTCAGCAGCCAGAAAGCGTTCGGGAGATTACTGATCTTCTTGATGCAGTAGGTAACACAACTAAAGCGACCACAAAAGGTTTTGCCATTGGCTCTGCAGCACTGGCATCCTTCTTACTTTTCAGTGCTTATATGGATGAGGTATCTGCATTTGCTCATGAACCTTTTAAACAGGTAGATATTGCAATTCCAGAAGTTTTCGTTGGTGGTTTGTTGGGTTCCATGCTTATTTTTCTCTTTAGTGCTTGGGCCTGCTCTGCTGTTGGCCGAACAGCCCAAGAGGTTGTAAAGGAAGTAAGAAGACAGTTCATTGAGAGGCCTGGTATTATGGATTATACCGAGAAACCTGAATATGGACGTTGCGTTGCTATTGTAGCATCAGCATCTTTAAGGGAGATGATTAAACCTGGTGCTTTGGCTATCATTTCTCCTATGGCAGTTGGCTTCCTGTTTAGAATATTGGGACACTACACTCGGCAGCCGCTTTTAGGGGCCAAGGTCGTTGCTGCGATGCTGATGTTTGCCACAGTCTCCGGTATTCTCATGGCACTTTTTCTGAACACAGCAGGGGGTGCCTGGGATAATGCCAAGAAGTATATAGAGACTGGGGTTCTTGGAGGTAAAGGTAGCGATTGTCATAAAGCTGCCGTAACTGGGGACACTGTAGGTGACCCATTCAAGGACACAGCAGGGCCTTCTCTTCACGTTCTCATTAAAATGCTCGCAACCATAACGCTGATATATGACATGGAATCTGAAGAACACCTTGTTGTTGAAAACCGAATTCTTCCTCAGCTTCCCGCAGTAATATTTGGAATGCTTGGTGCTTGCTTTGATGATTTCCCAAGTGGGAAAATAAAATATTTCAATCCTGAATACCCAAAAGAGAATGGTCGGCGTACAACGTGGCAGAGAATGGCAACGGTGGCGTTGAAAGCTGAAGCAGCAGAGCTCAGTGGCTGTGGCTAG | 5502 | 44.73 | MWRLKVADGGNDPYIYSMNNFVGRQIWEFDPNAGTPEERAEVERVRNEFTKNRLKGFPSADLLWRLQLLREKNFKQSIPPVKVEEGEEMSYEMAWDAMRRGAHFLAAIQASDGHWPSETSGPLFYLCPLLICMYIMGFMDTAFTPEHKKEMMRYVYNHQNEDGGWGLHVGGHSNMFCTTFNYISLRLLGEGPDVELVSRAREWIRDHGGVTSILSWGKTWLSILNVFDWSASNPMPPEYWMFPTWVPIHPSNMMCYTRITYMPMSYLYGKRFQAPLTPLVLQLRDELHTQPYDQINWRKVRHMCATEDLYFPHPIVQDLLWDTLYLLSEPLMTRWPFNKLIRQKALNETMRHIHYEDENSRYITIGCVEKPLCMLACWVEDPNSEYVKKHFARIPDYLWMAEDGMKMQSFGSQSWDAALAMQALLSCNIPHEIGPALNTGHQFIKNSQVRNNPPGDYKSMFRYMSKGSWTFSDCDHGWQVSDCTAENLKCCLLLSLLPPEMVGEKMEPERFYDAVNVILNMQSKNGGLPAWEPASSYYWMEWLNPVEFLEDLIIEHQHVECTSSALQAILLFRKQYPGHRRKEINNFINKAVQFLQDIQLPDGSWYGNWGICYTYGTWFALKALSMAGKTYENCEALRKGANFLIKIQNQEGGFGESYLSCPYKRYIPLDGKRSNLVQTAWGLMGLISAGQADVDPTPIHRAAKLLINSQTEDGDFPQEEITGEFFKNCTLHFAAFREVFPVMALGEYCNKDPARCSFSSLTRPRRVAQWFGIGSAQTLSIRSNYSSLFEFHKANHPLKKAQRVEEEEEGRKLEPQPSLSTSQSCSSPRCIISSSAFFPTPCWRTLNAVQLNPSHLIMHRLLFRDSILVSKLSALRVRPGFRITCSINRFSIIFCLIPVSANSVLFLVFSSFAWEISFRPFHPLDRPRISKIQRPGSGGDLPQGGEYNPYPIARRVNSSHTVLMDDDIENASLGVYQDRPRTFPDMRSKVNTPLIFRIMMGINIRVLLVLLLFAFGIIFYIGASTSPIIVFVFSICIVSFCFSIYLTKWVLSKDEGPQEMAQISEAIRDGAEGFFRTQYSTISKMAMLLAVVILCIYLFRSTTPQQESSGIGRSTTAYITVAAFLLGALCSGIAGYVGMWVSVRANVRVSSAARRSAREALQIAVRAGGFSAIVVVGMAVIGIAILYAAFHVWLDVGLPGSTKVTDLPLLLVGYGFGASFVALFAQLGGGIYTKAADVGADLVGKVEQGIPEDDPRNPAVIADLVGDNVGDCAARGADLFESIAAEIISAMILGGTMAERCKIEDPSGFILFPLVVHSFDLVISSIGILSIRRGTRESGVKGPIEDPMTILQRGYSVTIVLAVLTFGVSTRWLLHTEQAPSAWFNFALCGLVGIITAYIFVWITKYYTDYKHEPVRSLALSSSTGHGTNIIAGVSLGLESTALPVLVISFSIVSAFWLGRTSGLVDEAGNPTGGLFGTAVATMGMLSTAAYVLTMDMFGPIADNAGGIVEMSQQPESVREITDLLDAVGNTTKATTKGFAIGSAALASFLLFSAYMDEVSAFAHEPFKQVDIAIPEVFVGGLLGSMLIFLFSAWACSAVGRTAQEVVKEVRRQFIERPGIMDYTEKPEYGRCVAIVASASLREMIKPGALAIISPMAVGFLFRILGHYTRQPLLGAKVVAAMLMFATVSGILMALFLNTAGGAWDNAKKYIETGVLGGKGSDCHKAAVTGDTVGDPFKDTAGPSLHVLIKMLATITLIYDMESEEHLVVENRILPQLPAVIFGMLGACFDDFPSGKIKYFNPEYPKENGRRTTWQRMATVALKAEAAELSGCG | 1833 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 1568553 | 1591737 | - | CcPI632755_09g001730.1 | Cco09g0173 | 186630 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cco09g0173 | 1833 | Pfam | Inorganic H+ pyrophosphatase | 1037 | 1758 | IPR004131 | GO:0004427(InterPro)|GO:0009678(InterPro)|GO:0016020(InterPro)|GO:1902600(InterPro) | |
Cco09g0173 | 1833 | NCBIfam | V-type H(+)-translocating pyrophosphatase | 1031 | 1759 | IPR004131 | GO:0004427(InterPro)|GO:0009678(InterPro)|GO:0016020(InterPro)|GO:1902600(InterPro) | |
Cco09g0173 | 1833 | Hamap | Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA]. | 1026 | 1764 | IPR004131 | GO:0004427(InterPro)|GO:0009678(InterPro)|GO:0016020(InterPro)|GO:1902600(InterPro) | |
Cco09g0173 | 1833 | Gene3D | - | 119 | 411 | - | - | |
Cco09g0173 | 1833 | Pfam | Squalene-hopene cyclase C-terminal domain | 414 | 749 | IPR032696 | - | |
Cco09g0173 | 1833 | SUPERFAMILY | Terpenoid cyclases/Protein prenyltransferases | 121 | 407 | IPR008930 | - | |
Cco09g0173 | 1833 | MobiDBLite | consensus disorder prediction | 800 | 825 | - | - | |
Cco09g0173 | 1833 | SUPERFAMILY | Terpenoid cyclases/Protein prenyltransferases | 348 | 753 | IPR008930 | - | |
Cco09g0173 | 1833 | CDD | SQCY_1 | 98 | 748 | IPR018333 | GO:0005811(InterPro)|GO:0016104(InterPro)|GO:0016866(InterPro) | |
Cco09g0173 | 1833 | NCBIfam | squalene/oxidosqualene cyclases | 97 | 749 | IPR018333 | GO:0005811(InterPro)|GO:0016104(InterPro)|GO:0016866(InterPro) | |
Cco09g0173 | 1833 | Gene3D | - | 486 | 720 | - | - | |
Cco09g0173 | 1833 | PANTHER | TERPENE CYCLASE/MUTASE FAMILY MEMBER | 1 | 751 | IPR018333 | GO:0005811(InterPro)|GO:0016104(PANTHER)|GO:0016104(InterPro)|GO:0016866(InterPro)|GO:0042300(PANTHER) | |
Cco09g0173 | 1833 | Pfam | Squalene-hopene cyclase N-terminal domain | 100 | 356 | IPR032697 | - | |
Cco09g0173 | 1833 | ProSitePatterns | Terpene synthases signature. | 602 | 616 | IPR002365 | GO:0016866(InterPro) | |
Cco09g0173 | 1833 | SFLD | Prenyltransferase Like 2 | 94 | 750 | IPR018333 | GO:0005811(InterPro)|GO:0016104(InterPro)|GO:0016866(InterPro) | |
Cco09g0173 | 1833 | FunFam | Terpene cyclase/mutase family member | 386 | 755 | - | - | |
Cco09g0173 | 1833 | MobiDBLite | consensus disorder prediction | 800 | 814 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cco02g1745 | Cco-Chr2:30140178 | Cco09g0173 | Cco-Chr9:1568553 | 0.00E+00 | dispersed | |
Cco06g1353 | Cco-Chr6:24028856 | Cco09g0173 | Cco-Chr9:1568553 | 1.60E-115 | dispersed | |
Cco06g2052 | Cco-Chr6:30416147 | Cco09g0173 | Cco-Chr9:1568553 | 0.00E+00 | dispersed | |
Cco09g0001 | Cco-Chr9:4498 | Cco09g0173 | Cco-Chr9:1568553 | 2.2e-312 | dispersed | |
Cco09g0173 | Cco-Chr9:1568553 | Cco09g2409 | Cco-Chr9:38329248 | 3.10E-269 | dispersed | |
Cco09g0173 | Cco-Chr9:1568553 | Cco09g0174 | Cco-Chr9:1603260 | 1.20E-249 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cco09g0173 | K23025 | - | csv:101216883 | 1513.82 |