Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cco09g0206 | ATGGCCACGAGGCAGTCTGCTACTGCTCCTCCGAAAGTTGGCGTTGGCCATTCTCGTCTTCATCCTTCTCTCTCCTCTCTTCTCTCTCTTAAAAACCAACAACATCTGTGCCTTCTGTTTCGGCCACTTTTCCACACAAAAAAGAATTTGTATGTATACGAATATTCACAACCTGGGTTTTCGTATATTCCATTCAAATCTCTGTACAAATCCCTCCATGTAACACCCAGAAAGGCACATGGGATTTCATCTGTTTTGGCAACAAATCTCAATCAAATACTATGGCGACATGAGCACAAACAACAGATAAACAAGCCAAAAAGGAAGAACTGGGTTTTCATATCATCAACAGCAACAGAATTCCTTGCAAGCAGTTGGGGTAGAGAATTTGTCGCTGGTGGATTTGGTGGCATCGCCGGCATAATCTCCGGCTACCCACTTGATACTCTTCGAGTAAGGCAACAGCAATCCATTTCTGGTTCTGCTTTGAAAATCTTTCGCAATATCATTGCCAACGATGGCGTTGCTGGTCTTTACAGAGGCATGGCTGCTCCTTTGGCCTCTGTCACTTTCCAGAACGCCGCCGTGTTTCAGATCTACGCCGTTCTTTCTCGGGCATTCGACTCCTCCTCCCAATCCAATGGTGACCCTCCAAGCTATAAGGCCGTGGCCTTTGGAGGATTTGGCACCGGAGCTCTTCAGAGCTTCATCTTGTCGCCGGTGGAGCTTGTGAAGATCCGCCTGCAATTGCAGAGTTCAAGCCATGCAGCAGCATCACACCAACAATTAATTTCTTCTTCTTCCCATAGAGGTCCATTGAGCGTCGCCAAAAGCATCTGCAAAACAGAAGGATTGAGAGGAATTTACAGAGGACTTACCATAACCATGCTGAGAGATGCACCTGCACACGGCATTTATTTCTGGACATATGAGTGCATGAGAGAGCAGTTTCATCCTGGCTGCCGGAAGACCGGCCAAGAGAGCGTCGGCACAATGCTGGTCGCCGGAGGGCTTGCCGGAGTTTCCAGCTGGGTTTTTTGTTATCCCTTGGATGTATTGAAGACTAGAATTCAGGGTCAGACAGAAAGTTCATCTCGAAAGTACAATGGAATTGTGGATTGTCTTAGCAAAAGTGTGAGAGAAGAGGGTTACAGAGTGCTATGGCGAGGGCTCGGGACAGCAGTTGCCAGAGCATTTGTGGTAAATGGGGCCATTTTTGCTGCTTATGAGATAACATTGAGGTGTTTGTTTAGCAATGGAAGCAATCAGACACAACAATAA | 1281 | 46.84 | MATRQSATAPPKVGVGHSRLHPSLSSLLSLKNQQHLCLLFRPLFHTKKNLYVYEYSQPGFSYIPFKSLYKSLHVTPRKAHGISSVLATNLNQILWRHEHKQQINKPKRKNWVFISSTATEFLASSWGREFVAGGFGGIAGIISGYPLDTLRVRQQQSISGSALKIFRNIIANDGVAGLYRGMAAPLASVTFQNAAVFQIYAVLSRAFDSSSQSNGDPPSYKAVAFGGFGTGALQSFILSPVELVKIRLQLQSSSHAAASHQQLISSSSHRGPLSVAKSICKTEGLRGIYRGLTITMLRDAPAHGIYFWTYECMREQFHPGCRKTGQESVGTMLVAGGLAGVSSWVFCYPLDVLKTRIQGQTESSSRKYNGIVDCLSKSVREEGYRVLWRGLGTAVARAFVVNGAIFAAYEITLRCLFSNGSNQTQQ | 426 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 1835234 | 1836883 | - | CcPI632755_09g002060.1 | Cco09g0206 | 186663 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cco09g0206 | 426 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 127 | 206 | IPR018108 | - | |
Cco09g0206 | 426 | Pfam | Mitochondrial carrier protein | 224 | 317 | IPR018108 | - | |
Cco09g0206 | 426 | Pfam | Mitochondrial carrier protein | 327 | 417 | IPR018108 | - | |
Cco09g0206 | 426 | Pfam | Mitochondrial carrier protein | 125 | 207 | IPR018108 | - | |
Cco09g0206 | 426 | PRINTS | Mitochondrial carrier protein signature | 233 | 251 | IPR002067 | GO:0055085(InterPro) | |
Cco09g0206 | 426 | PRINTS | Mitochondrial carrier protein signature | 336 | 358 | IPR002067 | GO:0055085(InterPro) | |
Cco09g0206 | 426 | PRINTS | Mitochondrial carrier protein signature | 129 | 142 | IPR002067 | GO:0055085(InterPro) | |
Cco09g0206 | 426 | PRINTS | Mitochondrial carrier protein signature | 289 | 307 | IPR002067 | GO:0055085(InterPro) | |
Cco09g0206 | 426 | Gene3D | Mitochondrial carrier domain | 64 | 220 | IPR023395 | - | |
Cco09g0206 | 426 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 218 | 316 | IPR018108 | - | |
Cco09g0206 | 426 | SUPERFAMILY | Mitochondrial carrier | 126 | 410 | IPR023395 | - | |
Cco09g0206 | 426 | Gene3D | Mitochondrial carrier domain | 221 | 425 | IPR023395 | - | |
Cco09g0206 | 426 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 327 | 415 | IPR018108 | - | |
Cco09g0206 | 426 | PANTHER | MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED | 123 | 416 | IPR050567 | GO:0006810(PANTHER)|GO:0022857(PANTHER) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cco09g0206 | Cco-Chr9:1835234 | Cco10g2213 | Cco-Chr10:35174602 | 3.20E-20 | dispersed | |
Cco07g1383 | Cco-Chr7:27937686 | Cco09g0206 | Cco-Chr9:1835234 | 5.60E-123 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cco09g0206 | K15109 | - | csv:101222165 | 534.258 |