Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco09g0260 ATGTATGGAAGAAAAGCATGCCAGTTGGTGAAAGAGCTAGCAAGCGGTGAGAAAGGACAGCTAACACAGTTCAATAGCGACCTATTTGAACAGGTTATTTCAGAATGCCAGCAGCATCATCTTGAGCTTCAGTCCTTAATTAGGAAAGTACAGGAAGAAGGATTCGATCTTCAGACAACTAAGAATGAAGATCATTTTGGTGCGCTCATTCACCACCTTGCATTAGTTCGCAATAAACGCTGCCTTATGGCTTATGTGTATAATCGAGCTGAGATTATAAGAAGTTTGATATGGAAGGTAGTAGGATCTATGATTCCACTGGAAATACAAGAGAAGCTCTGCAACTCAGAGGAAGAGTATTTCAAGAAGCATTCTGCACGTCTGAAAGAATATATGTCAAAACTGGAGTTGGATTTGACAGTGGATATGGTGCCACCTAAGGATCCTTATATCCAAGTGAGGGTGCTTGATGATATCGGTGAAGGAATCGTATTGAGTGATGATAAAACAGCAAATTTTGCGCTTCATTCCATACATTTTCTTAAACGAACAGACGCTGAACAATACATCTCACGGTTGTTAGCAAGCGATGTGTTTCCTGCATCTGTTGTGAAAGCAATTCTATATCCTGGAGCCATCGCAAAAGCCATCTTTAACAACAAACCTATTCCATCCTTTAATAGCTTGCCAAAGCTATACAAGTTTATCCATGCTAAACCAACAGCTTTTCCTCTCACCTCGGATCTCCATCGCCTAGAGGTTATTGCAGGAAGTTATTTGGCAGTAGGAGGAGGTGTCATGGGAATAGTTAAAGCGGGGAGTGGGAGAATGAGTCTATTTGGTTGCCTTATCGCAATGTGGGGAATTGTTTGGAGGAAATCTTCAAATTTAAATCCCAATAAGGAAATTGGCCAAATCTATCCGACCATGTTTCTTGCTCTGCTTTTGGCTTTCTTGTCTGTTAGGAAGGATGTGAGGAGAATAGTACGTACCCTCAAACCTCAATCCAACCCTTTTTCTTCATGGAACAAACACAAGCACAAATGA 1047 41.07 MYGRKACQLVKELASGEKGQLTQFNSDLFEQVISECQQHHLELQSLIRKVQEEGFDLQTTKNEDHFGALIHHLALVRNKRCLMAYVYNRAEIIRSLIWKVVGSMIPLEIQEKLCNSEEEYFKKHSARLKEYMSKLELDLTVDMVPPKDPYIQVRVLDDIGEGIVLSDDKTANFALHSIHFLKRTDAEQYISRLLASDVFPASVVKAILYPGAIAKAIFNNKPIPSFNSLPKLYKFIHAKPTAFPLTSDLHRLEVIAGSYLAVGGGVMGIVKAGSGRMSLFGCLIAMWGIVWRKSSNLNPNKEIGQIYPTMFLALLLAFLSVRKDVRRIVRTLKPQSNPFSSWNKHKHK 348
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 2337602 2343166 - CcPI632755_09g002600.1 Cco09g0260 186717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco09g0260 348 CDD GINS_B_Psf1 149 190 - -
Cco09g0260 348 PANTHER PARTNER OF SLD5 1 192 IPR005339 GO:0000811(PANTHER)|GO:0000811(InterPro)|GO:0006260(InterPro)|GO:1902983(PANTHER)
Cco09g0260 348 SUPERFAMILY GINS helical bundle-like 1 147 IPR036224 -
Cco09g0260 348 CDD GINS_A_psf1 3 137 IPR005339 GO:0000811(InterPro)|GO:0006260(InterPro)
Cco09g0260 348 Pfam GINS complex protein helical bundle domain 63 135 IPR021151 -
Cco09g0260 348 Gene3D - 1 135 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco08g1488 Cco-Chr8:26692452 Cco09g0260 Cco-Chr9:2337602 1.80E-29 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco09g0260 K10732 - csv:101205409 372.859