Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco09g0325 ATGATTATCACTGTGAAGGATTCGACTATGGTGACTCCGGCGGAGGAGACGCCGCATCGGAGCCTCTGGAATTCCAACGTCGATCTCGTGGTGCCGAGTATGCATACGCCGAGCGTCTACTTCTACCGCCCTACCGGTGCCTCTAATTTCTTCGACGCTCAGGTTCTCAAGGAAGGCCTAAGCAAGGCGCTGGTTCCGTTTTATCCAATGGCCGGACGGTTGAGACGCGATGAAGACGGTCGAATCGAGATCAACTGTAATGCCGAAGGTGTGCTTCTTGTCGAGGCTGAGACCACGGCGGTTATCGACGATTTTGGTGATTTCGCGCCTACGTTGCAGCTCCGGCAGCTTATTCCGGCAGTAGATTACTCCGGCGGAATCGAGTCGTACCCCTTGCTGGTGTTACAGGTGACACACTTCAAATGCGGTGGCGTTTCCCTCGGCGTCGGAATGCAGCACCATGTAGCGGACGGCTTCTCCGGTCTCCACTTCGTCAACACTTGGTCCGACATGTCGCGTGGCCTCGACCTCAAGCTCCGGCCTTACATCGACCGGACCCTCCTCCGTGCGCGGGACCCACCTCAACCGACCTTCCGACACATCGAATATCAACCGGCCCCACCCATGAAAATCCCGGTCCAGCCCGACCCGGACGGAACCACCGTCTCCATTTTCAAATTCACCCGGGAGCAGCTTAATTTACTCAAAGCCAAATCCAAAGAAAACGGCAACACCACCAACTACAGCTCCTACGAGATGCTCTCCGGCCACGTATGGCGGTGCACGTGCAAGGCTCGTGACCTTCCGGAGGATCAAGACACTAAGCTTTACATTGCCACCGACGGTCGTGCCCGGTTGCGCCCGCCGCTCCCCAACGGTTACTTTGGCAATGTCATCTTCACAACGACGCCGCTCGCCGTCGCCGGCGAACTAATGTCGAATCCGACGTGGTTCGCAGCCGGGAAGATCCACGACGCCTTGGCTCGGATGGATAACGATTATTTGAGGTCGGCTTTGGACTATCTCGAGATTCAGCCAAACATATCGGCGTTGGTCCGTGGTGCTCATACTTTCCGGTGCCCCAATTTGGGGATCACGAGCTGGGTCAGACTGCCGATTCACGACGCCGATTTCGGGTGGGGCCGGCCGATTTTTATGGGCCCCGGCGGAATCGCATACGAGGGATTGTCGTTTATAATCCCGAGTGCTTCCGACGACGGCAGCTTGTCGGTGGCGATTTCGCTGCAGAATCGACATATGAAGGTGTTTGAGAAGCTGTTCTTTGATATTTGA 1293 56.3 MIITVKDSTMVTPAEETPHRSLWNSNVDLVVPSMHTPSVYFYRPTGASNFFDAQVLKEGLSKALVPFYPMAGRLRRDEDGRIEINCNAEGVLLVEAETTAVIDDFGDFAPTLQLRQLIPAVDYSGGIESYPLLVLQVTHFKCGGVSLGVGMQHHVADGFSGLHFVNTWSDMSRGLDLKLRPYIDRTLLRARDPPQPTFRHIEYQPAPPMKIPVQPDPDGTTVSIFKFTREQLNLLKAKSKENGNTTNYSSYEMLSGHVWRCTCKARDLPEDQDTKLYIATDGRARLRPPLPNGYFGNVIFTTTPLAVAGELMSNPTWFAAGKIHDALARMDNDYLRSALDYLEIQPNISALVRGAHTFRCPNLGITSWVRLPIHDADFGWGRPIFMGPGGIAYEGLSFIIPSASDDGSLSVAISLQNRHMKVFEKLFFDI 430
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 2842413 2846088 + CcPI632755_09g003250.1 Cco09g0325 186782
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco09g0325 430 Pfam Transferase family 2 425 - -
Cco09g0325 430 MobiDBLite consensus disorder prediction 196 215 - -
Cco09g0325 430 Gene3D - 211 430 IPR023213 -
Cco09g0325 430 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 4 421 IPR050317 GO:0016747(PANTHER)
Cco09g0325 430 FunFam Tryptamine hydroxycinnamoyl transferase 209 428 - -
Cco09g0325 430 Gene3D - 1 205 IPR023213 -
Cco09g0325 430 FunFam Spermidine hydroxycinnamoyl transferase 1 203 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco04g0743 Cco-Chr4:22612481 Cco09g0325 Cco-Chr9:2842413 1.90E-10 dispersed
Cco06g2007 Cco-Chr6:30136672 Cco09g0325 Cco-Chr9:2842413 2.60E-77 dispersed
Cco09g0325 Cco-Chr9:2842413 Cco11g0928 Cco-Chr11:14032599 8.50E-45 dispersed
Cco09g0325 Cco-Chr9:2842413 Cco05g2114 Cco-Chr5:30110976 5.90E-38 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco09g0325 K13065 - csv:101214857 847.81