Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco09g0436 ATGCTTTCTGCTGTCTTATATTGCATGACTATTCCACTTATCCTCACCTTTTTCCAACAAAAAACTTCCTCCATGTTTTCCCATGCATTTCCATTCCTTCATCACAAACCTGTGATGGATTCCGGCAACCTCTCCTCCTCCTCCCCTGCCGCGGCCTTGCTTCCTCCAATTTCCGTTGGAAACGGGCTCCGGTTGCTCCTCGATGTCCAAATCTTGGAGATCTCTTTCGCTCTTTTTGTGTTCTTAGTCATCCATGTCATTAGACAGAAGAGACGATATGGCTTGCCTATATGGCCAATTGTTGGAATGTTACCGGCTTTGATTACGGCAGCACGTGGGAATCTCTACGACTGGATTACTGACCTCCTCCGCCATCACAAGGGCACGTTTCAATTTCGAGGCCCCTGGCTTACTAGTCTCAATTGTGTCGTCACTGCTGATCCTCGAAACTTGGAGCACCTTCTCAAGACCAAATTTTCCTCCTACCCAAAAGGGCCATTCTTTCGTGACACGGTGAGAGACCTACTCGGTGACGGAATATTCGGTGCCGACGATGAGACGTGGCAACGACAAAGGAAGGTGGCGAGCATTGAGTTTCACTCGGCGAGGTTTCGACAAATGACGGTGGAGTCGTTGGTGGAGCTCGTCCACTCGAGGTTAGAAGCGGTGTTGGAGGATTTCGCGGGACGGTCGGCAACGGTGGACCTGCAGGATGTTCTTTTGAGGTTAACGTTTGACAATGTGTGTATGATTGCCTTTGGGGTGGATCCTGGCTGTTTGCGCGGCGGCTTACCGGAGATTCCATTTGCTAAGGCCTTTGAGGATGCCACTGAAGTTACTGTTATACGCTTCATCACACCTACTTTCGTATGGAAAGCCATGAGGTACCTGAACTTGGGTATGGAAAAGAAACTGAAGCAATCGATCAAAGCCGTCGACGAATTTGCAGATAATGTGATTCAAACACGGAAGAGAGAGCTCTCTACGGCGGCGCAACCGCAAGCCGATAACCAAAGATCTGACCTATTATCCGTATTCATGAAGCTAAGAGATGAGCAAGGGCGGCCGTTCTCCGACAAGTTTCTCAGAGATATTTGCGTCAATTTCATACTTGCCGGAAGAGACACATCTTCCGTAGCATTGAGTTGGTTCTTCTGGTTGCTCGATCAAAATCCCCATGTGGAAAACAAAATTCTGGCAGAAATTGGCAGAATCGTCGGCGAACGAGAAGAAGCCAAAACCAGAGAGCTTCGATTCGATTTGTTAGTGTTCAAACCAGAGGAGATCAAGAAAATGGAGTATTTGCACGCCGCCATTTCTGAAGCCCTAAGATTGTATCCATCAGTTCCAGTCGATCACAAAGAGGTCGTGGAGGACGATGTATTCCCAGACGGAACGATTCTGAAGAAAGGAACGAAAATCATCTACGCAATATACGCAATGGGAAGAATGGAAGCGATTTGGGGGAAAGATTGTCGCGAATTCAAACCTGAGAGATGGATGAGAGACGGTCGATTCATGAGCGAATCGGCGTATCGATTCACAGCCTTCAACGGCGGCCCTCGGCTGTGTCTTGGAAAGGATTTTGCGTACTATCAAATGAAATACGTCGCCGCTTCGATCATGAGCCGGTACCGGGTGGCGGTGGTGACGGGCCATTCGGTGGAGCCGAAGCTTGCCCTAACTTTCTACATGAAAAACGGTCTGAAAGTCCATTTGATTAAACGAGAAGCGGGACAGATTCGGAAATACATGAAGTTAAATTGA 1767 48.27 MLSAVLYCMTIPLILTFFQQKTSSMFSHAFPFLHHKPVMDSGNLSSSSPAAALLPPISVGNGLRLLLDVQILEISFALFVFLVIHVIRQKRRYGLPIWPIVGMLPALITAARGNLYDWITDLLRHHKGTFQFRGPWLTSLNCVVTADPRNLEHLLKTKFSSYPKGPFFRDTVRDLLGDGIFGADDETWQRQRKVASIEFHSARFRQMTVESLVELVHSRLEAVLEDFAGRSATVDLQDVLLRLTFDNVCMIAFGVDPGCLRGGLPEIPFAKAFEDATEVTVIRFITPTFVWKAMRYLNLGMEKKLKQSIKAVDEFADNVIQTRKRELSTAAQPQADNQRSDLLSVFMKLRDEQGRPFSDKFLRDICVNFILAGRDTSSVALSWFFWLLDQNPHVENKILAEIGRIVGEREEAKTRELRFDLLVFKPEEIKKMEYLHAAISEALRLYPSVPVDHKEVVEDDVFPDGTILKKGTKIIYAIYAMGRMEAIWGKDCREFKPERWMRDGRFMSESAYRFTAFNGGPRLCLGKDFAYYQMKYVAASIMSRYRVAVVTGHSVEPKLALTFYMKNGLKVHLIKREAGQIRKYMKLN 588
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 3891241 3893632 + CcPI632755_09g004360.1 Cco09g0436 186893
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco09g0436 588 Gene3D Cytochrome P450 93 586 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco09g0436 588 Pfam Cytochrome P450 96 561 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco09g0436 588 PRINTS E-class P450 group I signature 361 378 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco09g0436 588 PRINTS E-class P450 group I signature 436 454 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco09g0436 588 PRINTS E-class P450 group I signature 514 524 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco09g0436 588 PRINTS E-class P450 group I signature 90 109 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco09g0436 588 PRINTS E-class P450 group I signature 524 547 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco09g0436 588 PRINTS E-class P450 group I signature 381 407 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco09g0436 588 FunFam Cytochrome P450 86 579 - -
Cco09g0436 588 PANTHER CYTOCHROME P450 84 569 - -
Cco09g0436 588 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 517 526 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Cco09g0436 588 CDD CYP86A 130 569 - -
Cco09g0436 588 PRINTS P450 superfamily signature 372 389 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco09g0436 588 PRINTS P450 superfamily signature 524 535 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco09g0436 588 PRINTS P450 superfamily signature 515 524 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco09g0436 588 PRINTS P450 superfamily signature 437 448 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco09g0436 588 SUPERFAMILY Cytochrome P450 94 576 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco03g0091 Cco-Chr3:931086 Cco09g0436 Cco-Chr9:3891241 1.90E-123 dispersed
Cco04g1366 Cco-Chr4:29039957 Cco09g0436 Cco-Chr9:3891241 1.20E-63 dispersed
Cco09g0436 Cco-Chr9:3891241 Cco10g1628 Cco-Chr10:29649113 2.90E-104 dispersed
Cco01g1369 Cco-Chr1:24052890 Cco09g0436 Cco-Chr9:3891241 3.10E-91 transposed
Cco07g0074 Cco-Chr7:759432 Cco09g0436 Cco-Chr9:3891241 2.40E-94 transposed
Cco10g1902 Cco-Chr10:32577676 Cco09g0436 Cco-Chr9:3891241 1.80E-86 transposed
Cco10g1193 Cco-Chr10:24577506 Cco09g0436 Cco-Chr9:3891241 2.00E-208 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco09g0436 K15402 - csv:101212202 1056.59