Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cco09g0451 | ATGATCCCGCCCCTTGATGCTCTACTCCTTCCAAGCACATATCTTTGGCTTTCTTACCAAATTAGAGAAATTGATGCTCATGGAAGACGATTCCAAGGATCTAATTGTACTTTTCTCCTTCCCGGAACCGTTGACAAGAAGAGAACAATGGACGATAGCTGTGCTGTGTGTGCCGAGACTCTTGAATGGGTTGCCTATGGGTCTTGCGGCCATCGGGATGTCTGCTCCACCTGCGTTGCTCGTCTTCGATTCATTTGTGGTGATCCCCGTTGTTGCATCTGCAAGTCTGAATCCGCCGTCGTGTTCGTCTCTAAGGCCTTGGGAGATTATACAAGGACAATTAACGACTTCACAGTCTTTCCTTCTGAACCAAGAGAGGGTCGTAGTGGATCCTATTGGTATCATGAAGACACACAAGCATTTTTTGATGATGTTGATCACTACAAGATGATAAAAGCAATGTGCAGGTTGTCATGCAGTGTGTGTGATAAGATTGGTGAAGATCAACCAAATGATGCCTCAAAACGCCGAGGAAGGTTTCGGAATATTGAGCAGCTAAAGGGTCATTTGTTTCATCGACATAAGTTGTTTATGTGCAGCCTTTGTTTGGAAGGCAGGAAGGTTTTTATTTGTGAACAAAAGCTATATAATAGAGCACAATTGAATCAGCATATACACACGGGTGACTCTGAGGTCGATGGAAGTGAGAGTGAGAGAGGTGGTTTCACCGGGCACCCTATGTGTGAATTTTGCAGAACTCCATTTTATGGAGATAATGAGCTGTATACTCATATGTCAACTGAGCATTATACATGTCATATATGCCAAAGGCTCCATCCTGGACAGTACGAATACTATAAGAATTATGATGACCTAGAGATCCATTTTCGACAAGGACATTTTCTTTGTGAAGATGAAGCCTGCCTTGCTAAAAAGTTTATAGTGTTCCAATCTGAAGCGGAAATGAAGAGGCATAATACTATTGAACATGGTGGCAAGCTATCTCGATCAAAGCGAAATGCTGCTTTGCAGATACCAACCAGTTTTCGATATCGAAGAAGTAATGAGCAAGATAATCGCCGTGGTAGACGCACATTTCGTCGCGATTCTTCTGAAGATCTACTTTCTTTGGCCATTCAAGAAAGTTTTGAAACAGCTAATGTTGATGACACCAATCATGACCCATTACCTAGCGGACAAGTAGCCTCAGATCAGGAAAATATAAGCAACATTGATCCCTTGATTGAACCATTTGAAGCATTGGCAACAGCAGATCCTGAATCAGCTTCTAGATACCTTCAAGCCTTGGGCCATTCTAGGAATTCCCAATTGGAGCAATCGTCCTTTCCTCCCCTTTCAACAGCATCTAGCAGTAGCCATCCAAAGCCCAGTCAGGACAAAGACATTATACATAATAACAGTATGGCAGCTCATCTTCGCCGCCAGAGGAACGTGACTGTTCTGAATTCTGCAGGTTGGCCAAAATCAAGTCGTGCCCCTGTGATACCACTAAATAGCTCATCTCAAGCTTGGCCTGCAATAAACGCCAATCATGCAGCATCGAGCAGTTCTGGGCAGACTAAGGGTGTCGTCACCATCAATAATGGCCCTTCAGTCTCTGCTTACTCAAATGCTGCTCAGATGCATGCAAAGGCTCGATCTAGTTCTTCAAGTGGATCAGGTAGTAGCAGTAGGATCAGCCACTCTGCTTCCGCTCCCAGTCTCACTGACATTGCCTATACTGAACCCTCAGTTAATGAATTCCCTCCAGTATCTGCAGCACAGGCACGGAAGGCGCCCTCAAGTAGCCAGAGTTCAATGAACATGGAAGATGTGCAGACAGCAAACAAATCTCTAGTTGAAAAGATCCGTGCTGCACTTGATTTTGATCAAGATAGATATGCCATTTTTAAAGATATATCTGCACAATATCGTCAGGGTCAGATTGACACGGAAATGTATCTAGACTGTGTGCAACAGTTCGGCTTGTCACATCTTCTGCTTGAGTTGGCTAGGCTCTGTCCTGATCCTCAGAAACAGAAAGAACTTGTGGAGACCTATAATGCTAGTTTCCAAGATGTGATCCCAGAAAATGGTAGGGCTCTAGATGGTATTCAAATTAAAGACAAAAGTAAGGGAAAGAAAGGTAAAGGGAAGTCTATGGAGGTTAAAGAGAGCAGTTCCAAGGACAAGCTAGCAGATAGTATCTTGAGCAGTGTTCGGGAATTGCAGTCGAGTTTCAGGCCATCCGAGGAAAATGTAGAGGTATTATCGAAGGGTGAGTACCGTGCTTCAAAAGGGAAACTAAAGATATCATCTGATGACCAGCAAGGTGGGATAGGAGGACAAAACAGTCAACCGTCTACCGGTCTATCGAACCAAAGCACTGGGGATGGGGGTGGTGGGGGGAGCAAACAAAAAAAGAAAACCTCCAAGTTCCATAGAGTTCGTTTAGGCGATGGTTCAGTTGCTGCACTCTTAGATTTAAAAAACAACAATCTCGCTTTAGACCCAGACCCAGTCGAGAGAGTAGAGGACAGGAACAATGCTGCAGCAGGGGCATTGCCTGTTCGGGGCGTTTGGCGAAATGGTGCTCAAAGGCTTTTCTCCTAG | 2613 | 44.51 | MIPPLDALLLPSTYLWLSYQIREIDAHGRRFQGSNCTFLLPGTVDKKRTMDDSCAVCAETLEWVAYGSCGHRDVCSTCVARLRFICGDPRCCICKSESAVVFVSKALGDYTRTINDFTVFPSEPREGRSGSYWYHEDTQAFFDDVDHYKMIKAMCRLSCSVCDKIGEDQPNDASKRRGRFRNIEQLKGHLFHRHKLFMCSLCLEGRKVFICEQKLYNRAQLNQHIHTGDSEVDGSESERGGFTGHPMCEFCRTPFYGDNELYTHMSTEHYTCHICQRLHPGQYEYYKNYDDLEIHFRQGHFLCEDEACLAKKFIVFQSEAEMKRHNTIEHGGKLSRSKRNAALQIPTSFRYRRSNEQDNRRGRRTFRRDSSEDLLSLAIQESFETANVDDTNHDPLPSGQVASDQENISNIDPLIEPFEALATADPESASRYLQALGHSRNSQLEQSSFPPLSTASSSSHPKPSQDKDIIHNNSMAAHLRRQRNVTVLNSAGWPKSSRAPVIPLNSSSQAWPAINANHAASSSSGQTKGVVTINNGPSVSAYSNAAQMHAKARSSSSSGSGSSSRISHSASAPSLTDIAYTEPSVNEFPPVSAAQARKAPSSSQSSMNMEDVQTANKSLVEKIRAALDFDQDRYAIFKDISAQYRQGQIDTEMYLDCVQQFGLSHLLLELARLCPDPQKQKELVETYNASFQDVIPENGRALDGIQIKDKSKGKKGKGKSMEVKESSSKDKLADSILSSVRELQSSFRPSEENVEVLSKGEYRASKGKLKISSDDQQGGIGGQNSQPSTGLSNQSTGDGGGGGSKQKKKTSKFHRVRLGDGSVAALLDLKNNNLALDPDPVERVEDRNNAAAGALPVRGVWRNGAQRLFS | 870 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 4037011 | 4045117 | - | CcPI632755_09g004510.1 | Cco09g0451 | 186908 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cco09g0451 | 870 | MobiDBLite | consensus disorder prediction | 544 | 569 | - | - | |
Cco09g0451 | 870 | MobiDBLite | consensus disorder prediction | 702 | 730 | - | - | |
Cco09g0451 | 870 | MobiDBLite | consensus disorder prediction | 596 | 612 | - | - | |
Cco09g0451 | 870 | ProSiteProfiles | Zinc finger RING-type profile. | 54 | 95 | IPR001841 | - | |
Cco09g0451 | 870 | SMART | c2h2final6 | 246 | 269 | IPR013087 | - | |
Cco09g0451 | 870 | SMART | c2h2final6 | 301 | 330 | IPR013087 | - | |
Cco09g0451 | 870 | SMART | c2h2final6 | 157 | 194 | IPR013087 | - | |
Cco09g0451 | 870 | SMART | c2h2final6 | 270 | 300 | IPR013087 | - | |
Cco09g0451 | 870 | MobiDBLite | consensus disorder prediction | 439 | 468 | - | - | |
Cco09g0451 | 870 | CDD | RING-HC_ZNF598 | 52 | 102 | IPR041888 | - | |
Cco09g0451 | 870 | PANTHER | ZINC FINGER PROTEIN 598 | 50 | 864 | IPR044288 | GO:0016567(PANTHER)|GO:0043022(PANTHER)|GO:0061630(PANTHER)|GO:0061630(InterPro)|GO:0072344(InterPro)|GO:0072344(PANTHER) | |
Cco09g0451 | 870 | MobiDBLite | consensus disorder prediction | 703 | 730 | - | - | |
Cco09g0451 | 870 | MobiDBLite | consensus disorder prediction | 768 | 816 | - | - | |
Cco09g0451 | 870 | MobiDBLite | consensus disorder prediction | 591 | 612 | - | - | |
Cco09g0451 | 870 | MobiDBLite | consensus disorder prediction | 776 | 801 | - | - |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cco09g0451 | K22381 | - | csv:101214376 | 1422.14 |