Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco09g0451 ATGATCCCGCCCCTTGATGCTCTACTCCTTCCAAGCACATATCTTTGGCTTTCTTACCAAATTAGAGAAATTGATGCTCATGGAAGACGATTCCAAGGATCTAATTGTACTTTTCTCCTTCCCGGAACCGTTGACAAGAAGAGAACAATGGACGATAGCTGTGCTGTGTGTGCCGAGACTCTTGAATGGGTTGCCTATGGGTCTTGCGGCCATCGGGATGTCTGCTCCACCTGCGTTGCTCGTCTTCGATTCATTTGTGGTGATCCCCGTTGTTGCATCTGCAAGTCTGAATCCGCCGTCGTGTTCGTCTCTAAGGCCTTGGGAGATTATACAAGGACAATTAACGACTTCACAGTCTTTCCTTCTGAACCAAGAGAGGGTCGTAGTGGATCCTATTGGTATCATGAAGACACACAAGCATTTTTTGATGATGTTGATCACTACAAGATGATAAAAGCAATGTGCAGGTTGTCATGCAGTGTGTGTGATAAGATTGGTGAAGATCAACCAAATGATGCCTCAAAACGCCGAGGAAGGTTTCGGAATATTGAGCAGCTAAAGGGTCATTTGTTTCATCGACATAAGTTGTTTATGTGCAGCCTTTGTTTGGAAGGCAGGAAGGTTTTTATTTGTGAACAAAAGCTATATAATAGAGCACAATTGAATCAGCATATACACACGGGTGACTCTGAGGTCGATGGAAGTGAGAGTGAGAGAGGTGGTTTCACCGGGCACCCTATGTGTGAATTTTGCAGAACTCCATTTTATGGAGATAATGAGCTGTATACTCATATGTCAACTGAGCATTATACATGTCATATATGCCAAAGGCTCCATCCTGGACAGTACGAATACTATAAGAATTATGATGACCTAGAGATCCATTTTCGACAAGGACATTTTCTTTGTGAAGATGAAGCCTGCCTTGCTAAAAAGTTTATAGTGTTCCAATCTGAAGCGGAAATGAAGAGGCATAATACTATTGAACATGGTGGCAAGCTATCTCGATCAAAGCGAAATGCTGCTTTGCAGATACCAACCAGTTTTCGATATCGAAGAAGTAATGAGCAAGATAATCGCCGTGGTAGACGCACATTTCGTCGCGATTCTTCTGAAGATCTACTTTCTTTGGCCATTCAAGAAAGTTTTGAAACAGCTAATGTTGATGACACCAATCATGACCCATTACCTAGCGGACAAGTAGCCTCAGATCAGGAAAATATAAGCAACATTGATCCCTTGATTGAACCATTTGAAGCATTGGCAACAGCAGATCCTGAATCAGCTTCTAGATACCTTCAAGCCTTGGGCCATTCTAGGAATTCCCAATTGGAGCAATCGTCCTTTCCTCCCCTTTCAACAGCATCTAGCAGTAGCCATCCAAAGCCCAGTCAGGACAAAGACATTATACATAATAACAGTATGGCAGCTCATCTTCGCCGCCAGAGGAACGTGACTGTTCTGAATTCTGCAGGTTGGCCAAAATCAAGTCGTGCCCCTGTGATACCACTAAATAGCTCATCTCAAGCTTGGCCTGCAATAAACGCCAATCATGCAGCATCGAGCAGTTCTGGGCAGACTAAGGGTGTCGTCACCATCAATAATGGCCCTTCAGTCTCTGCTTACTCAAATGCTGCTCAGATGCATGCAAAGGCTCGATCTAGTTCTTCAAGTGGATCAGGTAGTAGCAGTAGGATCAGCCACTCTGCTTCCGCTCCCAGTCTCACTGACATTGCCTATACTGAACCCTCAGTTAATGAATTCCCTCCAGTATCTGCAGCACAGGCACGGAAGGCGCCCTCAAGTAGCCAGAGTTCAATGAACATGGAAGATGTGCAGACAGCAAACAAATCTCTAGTTGAAAAGATCCGTGCTGCACTTGATTTTGATCAAGATAGATATGCCATTTTTAAAGATATATCTGCACAATATCGTCAGGGTCAGATTGACACGGAAATGTATCTAGACTGTGTGCAACAGTTCGGCTTGTCACATCTTCTGCTTGAGTTGGCTAGGCTCTGTCCTGATCCTCAGAAACAGAAAGAACTTGTGGAGACCTATAATGCTAGTTTCCAAGATGTGATCCCAGAAAATGGTAGGGCTCTAGATGGTATTCAAATTAAAGACAAAAGTAAGGGAAAGAAAGGTAAAGGGAAGTCTATGGAGGTTAAAGAGAGCAGTTCCAAGGACAAGCTAGCAGATAGTATCTTGAGCAGTGTTCGGGAATTGCAGTCGAGTTTCAGGCCATCCGAGGAAAATGTAGAGGTATTATCGAAGGGTGAGTACCGTGCTTCAAAAGGGAAACTAAAGATATCATCTGATGACCAGCAAGGTGGGATAGGAGGACAAAACAGTCAACCGTCTACCGGTCTATCGAACCAAAGCACTGGGGATGGGGGTGGTGGGGGGAGCAAACAAAAAAAGAAAACCTCCAAGTTCCATAGAGTTCGTTTAGGCGATGGTTCAGTTGCTGCACTCTTAGATTTAAAAAACAACAATCTCGCTTTAGACCCAGACCCAGTCGAGAGAGTAGAGGACAGGAACAATGCTGCAGCAGGGGCATTGCCTGTTCGGGGCGTTTGGCGAAATGGTGCTCAAAGGCTTTTCTCCTAG 2613 44.51 MIPPLDALLLPSTYLWLSYQIREIDAHGRRFQGSNCTFLLPGTVDKKRTMDDSCAVCAETLEWVAYGSCGHRDVCSTCVARLRFICGDPRCCICKSESAVVFVSKALGDYTRTINDFTVFPSEPREGRSGSYWYHEDTQAFFDDVDHYKMIKAMCRLSCSVCDKIGEDQPNDASKRRGRFRNIEQLKGHLFHRHKLFMCSLCLEGRKVFICEQKLYNRAQLNQHIHTGDSEVDGSESERGGFTGHPMCEFCRTPFYGDNELYTHMSTEHYTCHICQRLHPGQYEYYKNYDDLEIHFRQGHFLCEDEACLAKKFIVFQSEAEMKRHNTIEHGGKLSRSKRNAALQIPTSFRYRRSNEQDNRRGRRTFRRDSSEDLLSLAIQESFETANVDDTNHDPLPSGQVASDQENISNIDPLIEPFEALATADPESASRYLQALGHSRNSQLEQSSFPPLSTASSSSHPKPSQDKDIIHNNSMAAHLRRQRNVTVLNSAGWPKSSRAPVIPLNSSSQAWPAINANHAASSSSGQTKGVVTINNGPSVSAYSNAAQMHAKARSSSSSGSGSSSRISHSASAPSLTDIAYTEPSVNEFPPVSAAQARKAPSSSQSSMNMEDVQTANKSLVEKIRAALDFDQDRYAIFKDISAQYRQGQIDTEMYLDCVQQFGLSHLLLELARLCPDPQKQKELVETYNASFQDVIPENGRALDGIQIKDKSKGKKGKGKSMEVKESSSKDKLADSILSSVRELQSSFRPSEENVEVLSKGEYRASKGKLKISSDDQQGGIGGQNSQPSTGLSNQSTGDGGGGGSKQKKKTSKFHRVRLGDGSVAALLDLKNNNLALDPDPVERVEDRNNAAAGALPVRGVWRNGAQRLFS 870
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 4037011 4045117 - CcPI632755_09g004510.1 Cco09g0451 186908
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco09g0451 870 MobiDBLite consensus disorder prediction 544 569 - -
Cco09g0451 870 MobiDBLite consensus disorder prediction 702 730 - -
Cco09g0451 870 MobiDBLite consensus disorder prediction 596 612 - -
Cco09g0451 870 ProSiteProfiles Zinc finger RING-type profile. 54 95 IPR001841 -
Cco09g0451 870 SMART c2h2final6 246 269 IPR013087 -
Cco09g0451 870 SMART c2h2final6 301 330 IPR013087 -
Cco09g0451 870 SMART c2h2final6 157 194 IPR013087 -
Cco09g0451 870 SMART c2h2final6 270 300 IPR013087 -
Cco09g0451 870 MobiDBLite consensus disorder prediction 439 468 - -
Cco09g0451 870 CDD RING-HC_ZNF598 52 102 IPR041888 -
Cco09g0451 870 PANTHER ZINC FINGER PROTEIN 598 50 864 IPR044288 GO:0016567(PANTHER)|GO:0043022(PANTHER)|GO:0061630(PANTHER)|GO:0061630(InterPro)|GO:0072344(InterPro)|GO:0072344(PANTHER)
Cco09g0451 870 MobiDBLite consensus disorder prediction 703 730 - -
Cco09g0451 870 MobiDBLite consensus disorder prediction 768 816 - -
Cco09g0451 870 MobiDBLite consensus disorder prediction 591 612 - -
Cco09g0451 870 MobiDBLite consensus disorder prediction 776 801 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco09g0451 K22381 - csv:101214376 1422.14