Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cco09g0579 | ATGGCCAGCATCAAAGTCCATGGACTCGCCCTTTCCGTACCAACATGCAAGGTTCTAGCTTGTCTCTACGAGAAAGACCTCGAATTCGAGTTTATCAATGTCAAGATGCACGAAGCGGAACATAAGAAACCCCACTTTCTCTCCATCAATCCTTTTGGTCAAATTCCTGGGTTCCAAGATGGGGATTTGACACTTTTTGAATCCAGGGCAATCACGCAGTACATCGCGAGAAATTATGCTAACAATGGAACCCAATTGATTCCCCAAGACATAAAGCAAGCAGCTACAGTATTAACATGGATTGAAGTGGAGAGTCATCATTTTGATCCACCAGCCTCGAAACTTGTGTATGAGCTCTGTTTGAAGCCAAAGCTTGGTTGGGGTGAGACAGATGCTGCAGTGGTTGAGCAAAAGGAAGCTGAGTTAGCCAAAGTTGTTGATATCTATGAGAAGAAGCTGGCTCAATCCAAGTACTTGGGAGGGGAGTCCTTCAGTTTGGCTGATTTGCTCCATATCCCAGCCATAGGGTTCTTGTTGGAGACACAAACCAAGGAACTGTTTGAATCTCGGCCCCATGTCAATGCTTGGGTGGCTGATATCATGGCCAGGCCGGCTTGGGCTAAGGTGCTTGCTTTGCGTAAGTAA | 645 | 46.36 | MASIKVHGLALSVPTCKVLACLYEKDLEFEFINVKMHEAEHKKPHFLSINPFGQIPGFQDGDLTLFESRAITQYIARNYANNGTQLIPQDIKQAATVLTWIEVESHHFDPPASKLVYELCLKPKLGWGETDAAVVEQKEAELAKVVDIYEKKLAQSKYLGGESFSLADLLHIPAIGFLLETQTKELFESRPHVNAWVADIMARPAWAKVLALRK | 214 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 5098258 | 5099072 | + | CcPI632755_09g005790.1 | Cco09g0579 | 187036 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cco09g0579 | 214 | Pfam | Glutathione S-transferase, N-terminal domain | 13 | 77 | IPR004045 | - | |
Cco09g0579 | 214 | CDD | GST_C_Phi | 92 | 210 | IPR034347 | - | |
Cco09g0579 | 214 | Pfam | Glutathione S-transferase, C-terminal domain | 113 | 204 | IPR004046 | - | |
Cco09g0579 | 214 | FunFam | Glutathione S-transferase F2 | 3 | 87 | - | - | |
Cco09g0579 | 214 | CDD | GST_N_Phi | 4 | 78 | - | - | |
Cco09g0579 | 214 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 2 | 83 | IPR004045 | - | |
Cco09g0579 | 214 | SUPERFAMILY | GST C-terminal domain-like | 74 | 213 | IPR036282 | - | |
Cco09g0579 | 214 | FunFam | Glutathione S-transferase F2 | 88 | 210 | - | - | |
Cco09g0579 | 214 | SFLD | Main (cytGST) | 1 | 212 | - | - | |
Cco09g0579 | 214 | SFLD | Main.5: Phi-like | 1 | 212 | - | - | |
Cco09g0579 | 214 | SUPERFAMILY | Thioredoxin-like | 1 | 88 | IPR036249 | - | |
Cco09g0579 | 214 | Gene3D | - | 90 | 214 | - | - | |
Cco09g0579 | 214 | Gene3D | Glutaredoxin | 2 | 87 | - | - | |
Cco09g0579 | 214 | ProSiteProfiles | Soluble glutathione S-transferase C-terminal domain profile. | 90 | 214 | IPR010987 | - | |
Cco09g0579 | 214 | PANTHER | GLUTATHIONE S-TRANSFERASE RHO | 1 | 213 | - | GO:0004364(PANTHER)|GO:0005737(PANTHER)|GO:0006749(PANTHER)|GO:0043295(PANTHER) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cco09g0579 | Cco-Chr9:5098258 | Cco09g0581 | Cco-Chr9:5103783 | 2.40E-48 | dispersed | |
Cco09g0578 | Cco-Chr9:5084640 | Cco09g0579 | Cco-Chr9:5098258 | 6.70E-91 | tandem | |
Cco09g0579 | Cco-Chr9:5098258 | Cco09g0580 | Cco-Chr9:5100177 | 3.80E-78 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cco09g0579 | K00799 | - | csv:101212536 | 385.571 |