Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco09g0584 ATGGCCGGAGAAGTAGAAATAGACGATCTGAACAACAGTCCCAAAATGCTGTCAAGGCCAAAACTACGGCGTTTCGACTCATTAGACATTGAATCGAACAAGCTGGACGGCGACCGTGGGCACCGCGCCGCCGCGGGGTGGTTGGTGACTCTGCAACTGGCGTTTCAGAGCATCGGGATAGTGTACGGAGACATCGGAACGTCGCCGTTGTACGTTTTTCAAAGCACTTTTCCGGCAGGGATAAAACATAAGGACGACGTTTTGGGAGTTCTATCGTTGATTTATTATACGCTCACTTTGATTCCTCTCTTTAAGTACGTCTTCATCGTCTTGCAGGCTAACGACAATGGCGACGGAGGGACATTTGCATTGTATTCTCTACTTTGCCGATATGCAAGAATAGGGTTAATACCTAGCCAACAAGTTGAGGATCGGGAGGTTTCTAATTACCGATTAGACATTCCCAACAACCGTGTGCGGCGGGCGTCGAGGTTGAAGTCTCAACTCGAAAACCGCCGCTCTGCCAAGCTTTTCTTGCTCTTTGCCACCATGCTCGGCACCTCCATGGTCATCGGTGACGGGGTTCTCACTCCTTGCATTTCTGTTTTGTCAGCTGTTGGAGGCATTAAGAGAGCTAGACCTTCAATAACACAAGATACAGTAGTGGGGATATCAGCTGGTATATTGGTGTGTCTTTTCATGGCTCAAAGATTTGGAACAGACAGAGTTGGATACACATTTGCTCCAATTATATGCATTTGGTTCAGTTTCATTGCTGCCATTGGTTTCTACAATTTTGTCAAGTTTGATCCTTCAGTCATCAAAGCTTTAAACCCTAAATATATCATTCACTATTTTATAAGGAACCAAACCCAAGCTTGGATTTCCCTTGGTGGCATTGTTCTCTCCATAACAGGGACAGAAGCATTATTTGCTGATGTTGGGCATTTCGGTGTGAAATCAATTCAAATAAGCATGTGTGCTGTTACCTATCCAGCTTTATTGCTTGCTTACACAGGACAAGCCTCTTACCTTCACACACACATTAATGAAGTTGGAGACACCTTCTTCAAATCCATTCCAGAACGTTTATACTGGCCAATGTTTGTGGTGGCCGTACTATCAGCCATTATTGCAAGCCAAGCTATGATTTCAGGAACATTCTCTATCATTCAACAATCCCTTTCACTTGGGTGTTTCCCAAGAGTCAAAGTTGTTCATACTTCTTCCAAGTATGAAGGCCAAGTTTATATCCCTGAGGTTAACTTTCTGCTCATGCTTGCTTGTTTGGTTGTCACTCTTGCCTTCAAGGAGACTGACAAGATAGGAAATGCCTATGGCATAGCTGTTGTGTTTGTGATGACTCTCACATCCTCATTTTTAGTATTAATCATGATCATGATATGGAAAACCCACATGATTTTGATAATCATTTACATTCTTGTCATTGGGTCGGTGGAGCTTCTTTATTTGAGTTCAGTTCTTTACAAGTTTGATCAAGGGGGTTACCTTCCACTTGCTTTTGCCTTTGCACTTATGGCCATAATGTATACTTGGAACACTGTCTATAGAAGAAAATACTATTATGAGCTTGACAACAAGATCTCTTCTCATCAACTCAAGGACATTGTATCAAATGCCAATCCTTGTAGAGTTCAAGGCCTTGCCATTTTCTACTCTGAGCTTGTACAAGGCATTCCTCCCATTTTCAAGCTTTACATGGCCAACGTCCCCGTCCTTCATCGAGTCCTCGTCTTCGTCTCGATCAAGTCGTTGCCTATTAGCAAGGTCCCATTAGACGAGCGGTTTCTCTTTTGCAGAGTTGAGCCGAGAGAGCTTAATATCTTTCGATGCGTCATGCGATATGGGTACACAGACGATCGAAACGAGCGAGAGTCGTTCGAGAGGAGTTTGGTGGAGAGATTGAAAGGGTTCTTAAGGGATGATGTTAGGGTTACTACCAAAGTGGAGGAGGAGAAAGATCATGAGAATGGGATAATAATTGAGGAAGAGAAACACAAGATTAGAGAAGTGGAATTGGAGGATGACATCGAGGAAGTTGATAAAGCTTGGGAACATGGTGTGGTTCATTTGGTTGGAGAAAGTGAAGTTGTTGCTAAGGAAGGATCTAATATTTGGAAGAGGGTTTTGATTGATTATGCTTACAATTTCTTGAAGAACAATTTGAGACAAAGTGAGAGAGTCTTTGATATTCCTCACAAACGTTTACTCAAAGTGGGAATGACATATGAACTTTAA 2259 42.85 MAGEVEIDDLNNSPKMLSRPKLRRFDSLDIESNKLDGDRGHRAAAGWLVTLQLAFQSIGIVYGDIGTSPLYVFQSTFPAGIKHKDDVLGVLSLIYYTLTLIPLFKYVFIVLQANDNGDGGTFALYSLLCRYARIGLIPSQQVEDREVSNYRLDIPNNRVRRASRLKSQLENRRSAKLFLLFATMLGTSMVIGDGVLTPCISVLSAVGGIKRARPSITQDTVVGISAGILVCLFMAQRFGTDRVGYTFAPIICIWFSFIAAIGFYNFVKFDPSVIKALNPKYIIHYFIRNQTQAWISLGGIVLSITGTEALFADVGHFGVKSIQISMCAVTYPALLLAYTGQASYLHTHINEVGDTFFKSIPERLYWPMFVVAVLSAIIASQAMISGTFSIIQQSLSLGCFPRVKVVHTSSKYEGQVYIPEVNFLLMLACLVVTLAFKETDKIGNAYGIAVVFVMTLTSSFLVLIMIMIWKTHMILIIIYILVIGSVELLYLSSVLYKFDQGGYLPLAFAFALMAIMYTWNTVYRRKYYYELDNKISSHQLKDIVSNANPCRVQGLAIFYSELVQGIPPIFKLYMANVPVLHRVLVFVSIKSLPISKVPLDERFLFCRVEPRELNIFRCVMRYGYTDDRNERESFERSLVERLKGFLRDDVRVTTKVEEEKDHENGIIIEEEKHKIREVELEDDIEEVDKAWEHGVVHLVGESEVVAKEGSNIWKRVLIDYAYNFLKNNLRQSERVFDIPHKRLLKVGMTYEL 752
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 5126557 5138733 + CcPI632755_09g005840.1 Cco09g0584 187041
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco09g0584 752 Pfam K+ potassium transporter integral membrane domain 53 539 IPR053951 -
Cco09g0584 752 Pfam K+ potassium transporter C-terminal domain 554 752 IPR053952 -
Cco09g0584 752 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 41 751 IPR003855 GO:0006813(PANTHER)|GO:0015079(PANTHER)|GO:0015079(InterPro)|GO:0016020(PANTHER)|GO:0016020(InterPro)|GO:0071805(InterPro)
Cco09g0584 752 NCBIfam potassium uptake protein 53 751 IPR003855 GO:0015079(InterPro)|GO:0016020(InterPro)|GO:0071805(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco09g0584 Cco-Chr9:5126557 Cco11g0046 Cco-Chr11:522500 1.80E-183 dispersed
Cco09g0584 Cco-Chr9:5126557 Cco09g0585 Cco-Chr9:5144988 4.90E-290 tandem
Cco10g1041 Cco-Chr10:22463363 Cco09g0584 Cco-Chr9:5126557 1.20E-288 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco09g0584 K03549 - csv:101204520 1273.46