Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco09g0585 ATGGAAGTCGATCGGACGGCCGAAAACGATCACTTTCCCGATTTCCAAGAAAGCTCCGACGACTCAACCCCCGACTTGCCGGAAAGGAAGCTCCGACGAAACGATTCATTGGACGTAGAATCCCGCACCGTCTCCGGCGCCGGCGCCCATGGCCACAAGGCGGCGGCGACGGCGAGCTGGGGAGTGATTTTACATCTGGCGTTTCAGAGCGTGGGAATTGTGTACGGCGATATCGGAACGTCGCCGTTGTATGTGTATGCAAGCACATTCACGGACGGAATCAAGCATAACGACGACGTTTTGGGTGTCCTGTCTTTGATTCTCTACACCCTCACTTTGATCCCTTTGCTTAAGTATGTCTTCTTCGTCTTGCAAGCCAATGACAACGGCGAAGGTGGAACATTTGCTTTATACTCATTACTATGCCGATACGCAAAAATTGGGCTAATACCAAGCCAGCAAGTGGAAGATCAAGAGGTATCAAATTTTCAGGTGGACCTTCCCTCCGGCCGCCTTAAAATGGCGTCTTGCCTTAAATCCAAACTTGAAAACACCACCGCCGCCAAGATTTTCTTGCTCTTCGCCACCATGCTCGGCACTTCCATGGTCATCGGCGACGGCGTCCTCACTCCTTCCATCTCTGTTTTGTCGGCCGTCGGAGGAATCAAGAATGCAACCTCGACCATGACACAAGATAAAATAGTTTGGATATCTGCAGCAATCTTGGTTTGCTTATTCATGGTACAAAGATTTGGAACCCATAAAGTTGGATATTCCTTTGCTCCAATTATTTGCATTTGGTTTGCACTTATTGGTGGAATTGGCTTCTACAATTTTTTGAAATTTGACCCTGCTGTCATCAAAGCTGTTAATCCAAAATACATTTTTGACTACTTCAAAAGAAACAAAAAGGACGCTTGGATCTCTCTCGGCGGTGTGGTTCTTGCCATTACTGGGACTGAAGCTCTCTTTGCGGACGTGGGGCACTTCACTGTGATGTCTATAAGACTAAGCATGTGTTGTGTGGCCTACCCCGCCCTAGTCTCCGCCTATGTCGGCCAAGCTGCCTTCCTTCGTAAGCATACCGATCTCGTCTCGGACACCTTCTTTAGCTCCATTCCAGGTCCTCTCTACTGGCCGACGTTTGTGGTGGCCGTGCTTGCGTCCATCGTGGCCAGCCAAGCCATGATCTCTGGCACCTTCTCCATCATCCAACAGTCCCTCTCCTATGGCTGTTTCCCCAGAGTTAAAGTTGTTCATACTTCTTCCAAGTATGAGGGTCAAGTTTACATCCCTGAAGTTAACTATCTTCTTATGTTGGCTTGTCTTGGAGTCACTCTAGGGTTTAAAGATACAACACGAATAGGGAACGCTTATGGCATTGCAGTGGTGTTTGTAATGGCACTCACTTCAAGTTTCCTAGTGCTCATCATGATCATGATATGGAAATCTCACATACTTATCATAATTTCCTATGTTCTCACCATTGGCTTATTAGAACTTTTCTATCTAAGTTCAGTCCTTTACAAGTTTGATCAAGGTGGCTATCTTCCTTTAGCTTTTGCTGGATTTTTAATGACAATAATGTACATTTGGAATGATGTTCATAGAAGAAAATACTACTATGAACTTGAACACAAGATTTCTCCTCAAAAGCTCAAGGACATTGCTTCTCTCACAACTCTCAATCGTGCCCCTGGCCTTGCCTTGTTCTACTCTGAGCTTGTCCAAGGCATTCCTCCAATCTTTAAGCATTATCTATCCAACATTCCCACTCTCCAAAGGGTCCTTGTCTTCGTATCGTTCAAGTCCCTCCCGATAAGTAAAGTCCCGACGGAAGAGCGGTTTCTATTTCGACGAGTTGAACCCGTTGACCTTAACGTGTTTCGATGCGTGGTAAGATACGGTTACAGAGATATCATCCACGAGCAAGAGTCGTTCGAGAGAGTGCTGGTGGAGAGGTTGAAAATGTTTATAGAGGAGGAGTCGTGGAAGCTGCAAAATGACAACGACGATGATAGAAGGAGGAGAACAGGAGAGGAGATAGAGGTGGTTGATAGGGCTTGGAGAGATGGAATTGTTCACTTGATTGGACAAAACGAGGTTGTGGCAAGTAAAGGGTCAAGATTAGCAAAAAGGGTTTTGATCAATTATGCTTATAATGCATTGAGGAGAAATTTGAGACAAAGTGAAGAGGTCTTTTACATTCCTAGAAAACGAATGCTCAAAGTGGGAATGACTTATGAGCTTTAG 2253 45.67 MEVDRTAENDHFPDFQESSDDSTPDLPERKLRRNDSLDVESRTVSGAGAHGHKAAATASWGVILHLAFQSVGIVYGDIGTSPLYVYASTFTDGIKHNDDVLGVLSLILYTLTLIPLLKYVFFVLQANDNGEGGTFALYSLLCRYAKIGLIPSQQVEDQEVSNFQVDLPSGRLKMASCLKSKLENTTAAKIFLLFATMLGTSMVIGDGVLTPSISVLSAVGGIKNATSTMTQDKIVWISAAILVCLFMVQRFGTHKVGYSFAPIICIWFALIGGIGFYNFLKFDPAVIKAVNPKYIFDYFKRNKKDAWISLGGVVLAITGTEALFADVGHFTVMSIRLSMCCVAYPALVSAYVGQAAFLRKHTDLVSDTFFSSIPGPLYWPTFVVAVLASIVASQAMISGTFSIIQQSLSYGCFPRVKVVHTSSKYEGQVYIPEVNYLLMLACLGVTLGFKDTTRIGNAYGIAVVFVMALTSSFLVLIMIMIWKSHILIIISYVLTIGLLELFYLSSVLYKFDQGGYLPLAFAGFLMTIMYIWNDVHRRKYYYELEHKISPQKLKDIASLTTLNRAPGLALFYSELVQGIPPIFKHYLSNIPTLQRVLVFVSFKSLPISKVPTEERFLFRRVEPVDLNVFRCVVRYGYRDIIHEQESFERVLVERLKMFIEEESWKLQNDNDDDRRRRTGEEIEVVDRAWRDGIVHLIGQNEVVASKGSRLAKRVLINYAYNALRRNLRQSEEVFYIPRKRMLKVGMTYEL 750
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 5144988 5152311 + CcPI632755_09g005850.1 Cco09g0585 187042
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco09g0585 750 MobiDBLite consensus disorder prediction 1 45 - -
Cco09g0585 750 NCBIfam potassium uptake protein 66 749 IPR003855 GO:0015079(InterPro)|GO:0016020(InterPro)|GO:0071805(InterPro)
Cco09g0585 750 MobiDBLite consensus disorder prediction 1 39 - -
Cco09g0585 750 Pfam K+ potassium transporter integral membrane domain 66 552 IPR053951 -
Cco09g0585 750 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 50 749 IPR003855 GO:0006813(PANTHER)|GO:0015079(PANTHER)|GO:0015079(InterPro)|GO:0016020(PANTHER)|GO:0016020(InterPro)|GO:0071805(InterPro)
Cco09g0585 750 Pfam K+ potassium transporter C-terminal domain 566 750 IPR053952 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco07g1286 Cco-Chr7:26942717 Cco09g0585 Cco-Chr9:5144988 3.20E-223 dispersed
Cco09g0585 Cco-Chr9:5144988 Cco10g1041 Cco-Chr10:22463363 1.90E-302 dispersed
Cco09g0584 Cco-Chr9:5126557 Cco09g0585 Cco-Chr9:5144988 4.90E-290 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco09g0585 K03549 - csv:101213493 1363.21