Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco09g0632 ATGGCTGGGAGTAATGAAGTCAACCTTAATGAATCTAAGAGAGTTGTTCCACTGAATACATGGGTGCTTATCTCCAATTTCAAGCTTGCCTACACCATCCTCCGCCGTGCCGATGGAACCTTCAACCGTGAGTTAGCAGAGTATCTCGAGCGTAAAGTTCCGGCCAATGTGATTCCGGTGGATGGGGTTTTCTCATTCGATCATGTCGATCGAGCTTCTGGCCTTCTCAACCGAGTTTACCAGCTGGCCCCAGAGAATGAAGCTCGATGGGGCATCATTGATCTGGAGAAGCCTCTAAGCACGTCGAAAGTTGTTCCTGTCATTCTGTTTTTTCATGGTGGGAGTTTTGCTCATTCATCAGCCAACAGTGCTATCTATGACACTTTTTGCCGCCGCATCGTAAGTGTATGTAAGGCGGTTGTAGTCTCGGTTAACTACCGTCGGTCACCTGAACACCGATATCCATGTGCGTATGAGGATGGCTGGACTGCACTCAAATGGGTTAAATCAAAGACATGGTTGCAAAGTGGGAAGGATTCTAAGGTTCATGTGTATTTGGCTGGAGACAGTTCTGGTGGCAACATAGCTCATCATGTTGCAGTGAGGGCAGCTGAAGAAGACATCGAGGTACTCGGCAACATCCTTCTTCACCCGATGTTTGGGGGTGAAAAGAGAACTGAATCGGAGAAGAAACTCGATGGTAAATACTTCGTAAGCATTCAAGACCGAGATTGGTACTGGAGAGCTTTTCTCCCTGAAGGAGAAGACAGAGATCATCCAGCTTGTAACATTTTTGGCCCCAAAGCCAAAAGCCTTGTAGGACTTGACTTCCCAAAAAGTTTAGTCGTGGTCGCCGGTTTGGATCTGATGCAAGATTGGCAACTCGCTTATGTGCAGGGCCTAAAAGACTCTGGTCACGACGTGAAACTTCTCTTCCTCGAGCAGGCAACAATTGGGTTCTACTTCTTGCCAAACAATGAACATTTCTACTGTCTAATGGAAGAGATAAGCAACTTCATCAACCCTTAA 1029 46.74 MAGSNEVNLNESKRVVPLNTWVLISNFKLAYTILRRADGTFNRELAEYLERKVPANVIPVDGVFSFDHVDRASGLLNRVYQLAPENEARWGIIDLEKPLSTSKVVPVILFFHGGSFAHSSANSAIYDTFCRRIVSVCKAVVVSVNYRRSPEHRYPCAYEDGWTALKWVKSKTWLQSGKDSKVHVYLAGDSSGGNIAHHVAVRAAEEDIEVLGNILLHPMFGGEKRTESEKKLDGKYFVSIQDRDWYWRAFLPEGEDRDHPACNIFGPKAKSLVGLDFPKSLVVVAGLDLMQDWQLAYVQGLKDSGHDVKLLFLEQATIGFYFLPNNEHFYCLMEEISNFINP 342
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 5584189 5585826 + CcPI632755_09g006320.1 Cco09g0632 187089
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco09g0632 342 FunFam Gibberellin receptor GID1 1 342 - -
Cco09g0632 342 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 184 196 IPR033140 -
Cco09g0632 342 SUPERFAMILY alpha/beta-Hydrolases 100 341 IPR029058 -
Cco09g0632 342 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 108 124 IPR002168 GO:0016787(InterPro)
Cco09g0632 342 Pfam alpha/beta hydrolase fold 108 321 IPR013094 GO:0016787(InterPro)
Cco09g0632 342 Gene3D alpha/beta hydrolase 1 341 IPR029058 -
Cco09g0632 342 PANTHER ARYLACETAMIDE DEACETYLASE 37 326 IPR050466 GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0009939(PANTHER)|GO:0010325(PANTHER)|GO:0010331(PANTHER)|GO:0048444(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco03g1722 Cco-Chr3:31941257 Cco09g0632 Cco-Chr9:5584189 1.20E-150 dispersed
Cco09g0632 Cco-Chr9:5584189 Cco09g0756 Cco-Chr9:6952870 6.30E-59 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco09g0632 K14493 - csv:101219912 681.789