Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco09g0964 ATGTCAACACTGAGCCAGAGCAGCTCCCTCAACAGTTGCACTAAGTTTCCCCACCCTCCCCACGACCATGTAGTAGATGAAATCCAATCCCAACCCTTTGACTACTCTAAACGCGCCCAATGGCTACGCGCCGCGGTCCTTGGTGCCAACGATGGCCTCGTCTCTACGGCATCTCTCATGATGGGCGTCGGTGCCGTCAAGCACGACGTCAAGGCCATGATCCTCACCGGCTTTGCTGGCCTCATTGCCGGTGCCTGCAGCATGGCCATCGGTGAGTTCGTTTCTGTCTACTCTCAATTGGATATAGAAATGGCGCATATAGAAAGAAACAAGGATCATAGGAAGGAGTTGGAGGAAGAGGAGAGAGAGAAACTACCAAACCCTCTTCAGGCGGCAGCGGCTTCGGCCTTGGCCTTTTCCACGGGGGCAATAGTGCCACTGTTGGCCGCAGCGTTCATAAGGCATTATAGGCTCCGGCTCGGGGTAGTGGTGGTGGCAGTCACAGTAGCGCTGGTAGGGTTCGGTTGGCTGGGTGCAGCATTAGGGAAGGCGCCAACCATCAGGTCCATAGTGAGGGTCTTGATTGGTGGGTGGGCAGCCATGGCCGTAACTTTTGGATTGACTAAGTTGATTGGATCAAGTGGATTATGA 651 54.53 MSTLSQSSSLNSCTKFPHPPHDHVVDEIQSQPFDYSKRAQWLRAAVLGANDGLVSTASLMMGVGAVKHDVKAMILTGFAGLIAGACSMAIGEFVSVYSQLDIEMAHIERNKDHRKELEEEEREKLPNPLQAAAASALAFSTGAIVPLLAAAFIRHYRLRLGVVVVAVTVALVGFGWLGAALGKAPTIRSIVRVLIGGWAAMAVTFGLTKLIGSSGL 216
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 9085486 9086136 - CcPI632755_09g009640.1 Cco09g0964 187421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco09g0964 216 Pfam VIT family 42 125 IPR008217 GO:0005384(InterPro)|GO:0030026(InterPro)
Cco09g0964 216 Pfam VIT family 116 208 IPR008217 GO:0005384(InterPro)|GO:0030026(InterPro)
Cco09g0964 216 Coils Coil 103 123 - -
Cco09g0964 216 MobiDBLite consensus disorder prediction 1 15 - -
Cco09g0964 216 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 19 213 IPR008217 GO:0005381(PANTHER)|GO:0005384(InterPro)|GO:0005384(PANTHER)|GO:0006880(PANTHER)|GO:0016020(PANTHER)|GO:0030026(PANTHER)|GO:0030026(InterPro)
Cco09g0964 216 MobiDBLite consensus disorder prediction 1 22 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco08g0831 Cco-Chr8:20149500 Cco09g0964 Cco-Chr9:9085486 1.30E-73 dispersed
Cco09g0964 Cco-Chr9:9085486 Cco09g1586 Cco-Chr9:24140218 3.10E-59 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco09g0964 K22736 - csv:101210510 365.155