Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cco09g0964 | ATGTCAACACTGAGCCAGAGCAGCTCCCTCAACAGTTGCACTAAGTTTCCCCACCCTCCCCACGACCATGTAGTAGATGAAATCCAATCCCAACCCTTTGACTACTCTAAACGCGCCCAATGGCTACGCGCCGCGGTCCTTGGTGCCAACGATGGCCTCGTCTCTACGGCATCTCTCATGATGGGCGTCGGTGCCGTCAAGCACGACGTCAAGGCCATGATCCTCACCGGCTTTGCTGGCCTCATTGCCGGTGCCTGCAGCATGGCCATCGGTGAGTTCGTTTCTGTCTACTCTCAATTGGATATAGAAATGGCGCATATAGAAAGAAACAAGGATCATAGGAAGGAGTTGGAGGAAGAGGAGAGAGAGAAACTACCAAACCCTCTTCAGGCGGCAGCGGCTTCGGCCTTGGCCTTTTCCACGGGGGCAATAGTGCCACTGTTGGCCGCAGCGTTCATAAGGCATTATAGGCTCCGGCTCGGGGTAGTGGTGGTGGCAGTCACAGTAGCGCTGGTAGGGTTCGGTTGGCTGGGTGCAGCATTAGGGAAGGCGCCAACCATCAGGTCCATAGTGAGGGTCTTGATTGGTGGGTGGGCAGCCATGGCCGTAACTTTTGGATTGACTAAGTTGATTGGATCAAGTGGATTATGA | 651 | 54.53 | MSTLSQSSSLNSCTKFPHPPHDHVVDEIQSQPFDYSKRAQWLRAAVLGANDGLVSTASLMMGVGAVKHDVKAMILTGFAGLIAGACSMAIGEFVSVYSQLDIEMAHIERNKDHRKELEEEEREKLPNPLQAAAASALAFSTGAIVPLLAAAFIRHYRLRLGVVVVAVTVALVGFGWLGAALGKAPTIRSIVRVLIGGWAAMAVTFGLTKLIGSSGL | 216 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 9085486 | 9086136 | - | CcPI632755_09g009640.1 | Cco09g0964 | 187421 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cco09g0964 | 216 | Pfam | VIT family | 42 | 125 | IPR008217 | GO:0005384(InterPro)|GO:0030026(InterPro) | |
Cco09g0964 | 216 | Pfam | VIT family | 116 | 208 | IPR008217 | GO:0005384(InterPro)|GO:0030026(InterPro) | |
Cco09g0964 | 216 | Coils | Coil | 103 | 123 | - | - | |
Cco09g0964 | 216 | MobiDBLite | consensus disorder prediction | 1 | 15 | - | - | |
Cco09g0964 | 216 | PANTHER | FE(2+)/MN(2+) TRANSPORTER PCL1 | 19 | 213 | IPR008217 | GO:0005381(PANTHER)|GO:0005384(InterPro)|GO:0005384(PANTHER)|GO:0006880(PANTHER)|GO:0016020(PANTHER)|GO:0030026(PANTHER)|GO:0030026(InterPro) | |
Cco09g0964 | 216 | MobiDBLite | consensus disorder prediction | 1 | 22 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cco08g0831 | Cco-Chr8:20149500 | Cco09g0964 | Cco-Chr9:9085486 | 1.30E-73 | dispersed | |
Cco09g0964 | Cco-Chr9:9085486 | Cco09g1586 | Cco-Chr9:24140218 | 3.10E-59 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cco09g0964 | K22736 | - | csv:101210510 | 365.155 |