Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco09g1194 ATGAAGTCAATGGGGTCGACGGAGAGCATTGATGACCTTGGATATAGTCAGTTCGGGTCAATAGGGATTGTCAGTGGCTGTGGACATGATCATTTGAGTTACCATCGCCACCAGTCAATGCCCATTCCTACTGCCGTCAATGCCCTCAAATCCTCAAGGTCAATATCTTGGTTGTCGACTGGTAGGCTTCAACAAACCTTGGCGAGATGTTTGGAGCTGAGTGGGATATCTCTGCATTCGGGGAAGGTTTCGAAAGTGAAATTATGTCCGGAATTTGCAGGTCGAGGGAGGTATTTTGATTTCAAGTCCAACTTCATTCCTGCCTCAATCGATTATGCCGAAGAGTCGCCTCTTTGTACCACACTTTCTAAGGATGGGTTCAAAATTCGAACAGTTGAGCATTTGCTTTCTGCCATGGAGGCTATGGGGGTTGACAATTGTAGGATCGAGATAGCGAATGAAGATGATAAAGATAGTGAAGTGGAGGTTCCAATTTTTGATGGATCTGCGGGTAAATGGGTGGATGCAATAGAGGAGATTGGTCTTACGTTGGCTATAGACCAGTGTGGCAACTGCTGTGAGAAAATGGCACCATATGTAAATCAACCTGTCCATGTGTGGAGGAATGACTGTTATCTTGTTGCTTTTCCAGCCTCAGCAGTTCGTATCACTTATGGAATTGACTTTCCTCAGGTGCCTGACATTGGCCGCCAATGGTTTTCTACTGCCCCTTTGGACAACATGTTCTATGCCGAGCAAATAGCTCCATCAAGAACCTTTTGCATTTATGAGGAGGTAGAGCAAATGCGTAATATGGGACTCATAAAAGGAGGCTCCATAGAAAATGCTTTAGTTTGCAGTGTCAGCAAAGGTTGGATCAATCCCCCATTGCGTTTCCATGATGAACCTTGTCGCCACAAGGTTTTAGATTTAATTGGGGATCTGTCACTTTTTGCACAGTTGGGCAGTCAAGGGATTCCGGTGGCACACATAGTGGTTTACAAGGGTGGTCATGCTACGCACGTTAATTTTGTTCGCCGCTTATCAGAAAACATTTGA 1059 45.14 MKSMGSTESIDDLGYSQFGSIGIVSGCGHDHLSYHRHQSMPIPTAVNALKSSRSISWLSTGRLQQTLARCLELSGISLHSGKVSKVKLCPEFAGRGRYFDFKSNFIPASIDYAEESPLCTTLSKDGFKIRTVEHLLSAMEAMGVDNCRIEIANEDDKDSEVEVPIFDGSAGKWVDAIEEIGLTLAIDQCGNCCEKMAPYVNQPVHVWRNDCYLVAFPASAVRITYGIDFPQVPDIGRQWFSTAPLDNMFYAEQIAPSRTFCIYEEVEQMRNMGLIKGGSIENALVCSVSKGWINPPLRFHDEPCRHKVLDLIGDLSLFAQLGSQGIPVAHIVVYKGGHATHVNFVRRLSENI 352
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 11880135 11895488 - CcPI632755_09g011940.1 Cco09g1194 187651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco09g1194 352 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 27 - -
Cco09g1194 352 Pfam UDP-3-O-acyl N-acetylglycosamine deacetylase 64 349 IPR004463 GO:0008759(InterPro)|GO:0009245(InterPro)
Cco09g1194 352 Gene3D lpxc deacetylase, domain 2 199 352 IPR011334 GO:0008759(InterPro)|GO:0009245(InterPro)
Cco09g1194 352 SUPERFAMILY Ribosomal protein S5 domain 2-like 202 350 IPR020568 -
Cco09g1194 352 NCBIfam UDP-3-O-acyl-N-acetylglucosamine deacetylase 64 349 IPR004463 GO:0008759(InterPro)|GO:0009245(InterPro)
Cco09g1194 352 SUPERFAMILY Ribosomal protein S5 domain 2-like 63 182 IPR020568 -
Cco09g1194 352 PANTHER UDP-3-O-ACYL-N-ACETYLGLUCOSAMINE DEACETYLASE 1, MITOCHONDRIAL-RELATED 40 351 IPR004463 GO:0008759(InterPro)|GO:0009245(InterPro)
Cco09g1194 352 Gene3D lpxc deacetylase, domain 1 62 187 IPR015870 GO:0008759(InterPro)|GO:0009245(InterPro)
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco09g1194 K02535 - csv:101205101 580.482