Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cco09g1370 | ATGGCACTAGCAGTTAAGGCTTTTCCGTTCACTGTGGTGAGTCACGTGCTGGCAATCGTGGCGCTCATTCTTGTCCTGGTTTGGACCATTCACTTCAGAGGCGGCTTCGCTTGGGAGGCTGTCAATAAGAATCTCATCTTCAACATTCATCCTGTTCTTATGCTACTGGGATTGATCATCATAGGAGGTGAAGCAATAATTAGTTATAAATCACTGCCATTAAGGAAAGAAGTGAAGAAAGTGATTCATTTGGTGCTACACGGCGTCGCATTGGCACTGGGTATTGTGGGGATCATCGCCGCTTTCAAGAACCATAATGAGAGTGGGATCGCTAATCTTTACAGCTTGCATTCTTGGATTGGAATTGGCGTAATCAGCCTTTATGGTCTCCAGTGGGTGTACGGGTTCGTGACATTCTTCTACCCAGGAGGATCCGCAGATCTCCGACGAGCGTCACTCCCATGGCACGTGCTTTTTGGGATTACTATATACATATTGGCCGTCGGCAACTCGGCATTGGGTTTCCTTGAGAAGCTAACATTTCTTGAGAGCTCCGGCCTCGCTAAATACGGCAACGAGGCCTTTCTCGTCAACTTCACTGCCATCACCACCGTCATTTTTGCACTGTTTGTGATTTTGTCTGTTATTCCTCAGCCTTGCGTTCAAGAAGACAACCATGGCGATTATTCTGCGATATGA | 699 | 47.07 | MALAVKAFPFTVVSHVLAIVALILVLVWTIHFRGGFAWEAVNKNLIFNIHPVLMLLGLIIIGGEAIISYKSLPLRKEVKKVIHLVLHGVALALGIVGIIAAFKNHNESGIANLYSLHSWIGIGVISLYGLQWVYGFVTFFYPGGSADLRRASLPWHVLFGITIYILAVGNSALGFLEKLTFLESSGLAKYGNEAFLVNFTAITTVIFALFVILSVIPQPCVQEDNHGDYSAI | 232 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 9 | 16655596 | 16664296 | + | CcPI632755_09g013700.1 | Cco09g1370 | 187827 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cco09g1370 | 232 | ProSiteProfiles | Cytochrome b561 domain profile. | 13 | 216 | IPR006593 | - | |
| Cco09g1370 | 232 | CDD | Cyt_b561_ACYB-1_like | 42 | 183 | - | - | |
| Cco09g1370 | 232 | FunFam | Cytochrome b reductase 1 | 4 | 225 | - | - | |
| Cco09g1370 | 232 | SMART | 561_7 | 49 | 175 | IPR006593 | - | |
| Cco09g1370 | 232 | PANTHER | CYTOCHROME B561-RELATED | 5 | 220 | IPR043205 | GO:0016491(InterPro)|GO:0016491(PANTHER) | |
| Cco09g1370 | 232 | Pfam | Eukaryotic cytochrome b561 | 49 | 181 | IPR006593 | - | |
| Cco09g1370 | 232 | Gene3D | - | 2 | 225 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cco01g0708 | Cco-Chr1:7428681 | Cco09g1370 | Cco-Chr9:16655596 | 1.30E-47 | dispersed | |
| Cco07g0730 | Cco-Chr7:14085734 | Cco09g1370 | Cco-Chr9:16655596 | 2.00E-45 | dispersed | |
| Cco09g1370 | Cco-Chr9:16655596 | Cco11g0544 | Cco-Chr11:5767083 | 2.10E-53 | dispersed | |
| Cco09g1370 | Cco-Chr9:16655596 | Cco05g2578 | Cco-Chr5:34027209 | 5.50E-30 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cco09g1370 | K08360 | - | csv:101209308 | 382.489 |