Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cco09g1370 ATGGCACTAGCAGTTAAGGCTTTTCCGTTCACTGTGGTGAGTCACGTGCTGGCAATCGTGGCGCTCATTCTTGTCCTGGTTTGGACCATTCACTTCAGAGGCGGCTTCGCTTGGGAGGCTGTCAATAAGAATCTCATCTTCAACATTCATCCTGTTCTTATGCTACTGGGATTGATCATCATAGGAGGTGAAGCAATAATTAGTTATAAATCACTGCCATTAAGGAAAGAAGTGAAGAAAGTGATTCATTTGGTGCTACACGGCGTCGCATTGGCACTGGGTATTGTGGGGATCATCGCCGCTTTCAAGAACCATAATGAGAGTGGGATCGCTAATCTTTACAGCTTGCATTCTTGGATTGGAATTGGCGTAATCAGCCTTTATGGTCTCCAGTGGGTGTACGGGTTCGTGACATTCTTCTACCCAGGAGGATCCGCAGATCTCCGACGAGCGTCACTCCCATGGCACGTGCTTTTTGGGATTACTATATACATATTGGCCGTCGGCAACTCGGCATTGGGTTTCCTTGAGAAGCTAACATTTCTTGAGAGCTCCGGCCTCGCTAAATACGGCAACGAGGCCTTTCTCGTCAACTTCACTGCCATCACCACCGTCATTTTTGCACTGTTTGTGATTTTGTCTGTTATTCCTCAGCCTTGCGTTCAAGAAGACAACCATGGCGATTATTCTGCGATATGA 699 47.07 MALAVKAFPFTVVSHVLAIVALILVLVWTIHFRGGFAWEAVNKNLIFNIHPVLMLLGLIIIGGEAIISYKSLPLRKEVKKVIHLVLHGVALALGIVGIIAAFKNHNESGIANLYSLHSWIGIGVISLYGLQWVYGFVTFFYPGGSADLRRASLPWHVLFGITIYILAVGNSALGFLEKLTFLESSGLAKYGNEAFLVNFTAITTVIFALFVILSVIPQPCVQEDNHGDYSAI 232
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
9 16655596 16664296 + CcPI632755_09g013700.1 Cco09g1370 187827
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cco09g1370 232 ProSiteProfiles Cytochrome b561 domain profile. 13 216 IPR006593 -
Cco09g1370 232 CDD Cyt_b561_ACYB-1_like 42 183 - -
Cco09g1370 232 FunFam Cytochrome b reductase 1 4 225 - -
Cco09g1370 232 SMART 561_7 49 175 IPR006593 -
Cco09g1370 232 PANTHER CYTOCHROME B561-RELATED 5 220 IPR043205 GO:0016491(InterPro)|GO:0016491(PANTHER)
Cco09g1370 232 Pfam Eukaryotic cytochrome b561 49 181 IPR006593 -
Cco09g1370 232 Gene3D - 2 225 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco01g0708 Cco-Chr1:7428681 Cco09g1370 Cco-Chr9:16655596 1.30E-47 dispersed
Cco07g0730 Cco-Chr7:14085734 Cco09g1370 Cco-Chr9:16655596 2.00E-45 dispersed
Cco09g1370 Cco-Chr9:16655596 Cco11g0544 Cco-Chr11:5767083 2.10E-53 dispersed
Cco09g1370 Cco-Chr9:16655596 Cco05g2578 Cco-Chr5:34027209 5.50E-30 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco09g1370 K08360 - csv:101209308 382.489