Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco09g1586 ATGGCTTCCTTTCATGCAGAAGCTTCTGAATCTGGCAGTGTTGATTATACTCAGCGAGCTCAGTGGCTGCGAGCAGCAATTCTCGGGGCCAACGATGGGCTCGTCTCCGTTGCATCGCTGATGATGGGCGTTGGAGCCGTGAAGCCCGATGCCAAAGCCATGCTTATTGCAGGATTTGCGGGGCTGGTCGCTGGAGCTTGCAGTATGGCGATCGGAGAGTTTGTCTCTGTTTACACCCAATATGATATAGAGGAAGCTCAGCTGAAGAGAGATGGGAAGGAAAAGAATAAGAGCATACAACCAAACGACCAGGCTGATGAGGAAGAGAAGCTGCCAAATCCATTACAGGCTGCACTCGCATCAGCGATAGCATTTTCGATTGGAGCAGTCATTCCTTTGCTGGCAGCGGTGTTTATCCGAGACCATAAGGTGAGGCAAGGGGTGGTCGCAGCGGTGGCAAGCGTGACGCTGGCAGTTTTTGGGGTAGTTGGAGCCATTTTGGGGAGAACTCCGGTGGGGAAATCGGCGGCAAGAGTGCTTGTTGGAGGGTGGATGGCTATGGCCATTACTTTTGGCCTTACAAAGCTGCTTGGGTCTAAGGGACTGTGA 609 52.71 MASFHAEASESGSVDYTQRAQWLRAAILGANDGLVSVASLMMGVGAVKPDAKAMLIAGFAGLVAGACSMAIGEFVSVYTQYDIEEAQLKRDGKEKNKSIQPNDQADEEEKLPNPLQAALASAIAFSIGAVIPLLAAVFIRDHKVRQGVVAAVASVTLAVFGVVGAILGRTPVGKSAARVLVGGWMAMAITFGLTKLLGSKGL 202
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 24140218 24141401 - CcPI632755_09g015860.1 Cco09g1586 188043
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco09g1586 202 CDD Nodulin-21 21 171 - -
Cco09g1586 202 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 8 198 IPR008217 GO:0005381(PANTHER)|GO:0005384(InterPro)|GO:0005384(PANTHER)|GO:0006880(PANTHER)|GO:0016020(PANTHER)|GO:0030026(PANTHER)|GO:0030026(InterPro)
Cco09g1586 202 Pfam VIT family 23 99 IPR008217 GO:0005384(InterPro)|GO:0030026(InterPro)
Cco09g1586 202 Pfam VIT family 106 194 IPR008217 GO:0005384(InterPro)|GO:0030026(InterPro)
Cco09g1586 202 MobiDBLite consensus disorder prediction 91 111 - -
Cco09g1586 202 MobiDBLite consensus disorder prediction 91 110 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco09g0964 Cco-Chr9:9085486 Cco09g1586 Cco-Chr9:24140218 3.10E-59 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco09g1586 K22736 - csv:101214875 342.428