Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cco09g1898 ATGGAGATATGGTTACTCCTCGTCATCATCTCCCTCTCCATTTATTTCCTCATAATCACCATTTTTAACAAATTCCAAAGCTCCACAAAGCTCCCGCCAGGTCCTCCTTCAATCCCCATCCTCACCAATTTCCTATGGCTCCGAAGATCCCCACTCCAAATCGAGTCTCTGTTGCGCAGTTTCATCGCCAAATATGGCCCCATCCTCACCCTCCCCATCGGCCCCAGCCCCGCCATCGTTATCGCCGACCGCTCTATCGCCCACAAAGCCCTCCTCCAAAACGCCGCTCTCTTCGCCGACCGCCCACCGGCCCTCGCCATGAGCAACATCATCTCCACCCACCATTACAACCTCGCCTCTGCTCCGTACGGCCCACTCTGGCGCCTCCTCCGCCGCAATCTTACTTCCCAAATCCTCCATCCTTCCCGTGTCAAGTCCTACGCCCGTTCTCGCAAGTGGGTTTTGGACGTTCTTCTTAATCGCTTTCTCTCTCACTCTCGATCCGGAACTCCCGTGTGCGTTGTCGATCATTTTCAGTACGCTATGATCTATTTGTTGTTGATTATGTGTTTTGGGGATAAGTTTGACGAAACCCAGATCAAGGAAATTGAGAATGTGGAGCGTGAGTTGCTAGTAAATCTTCGGCGTTTCATTGTCCTTAATTTTTGGCCAAAATTGACCAACATTTTGTTTCGAAATCGCAAACTGATGTTTTCGCAACTTAGAATAAAGCAAGAGAAGGTATTAATGCCTCTAATCAATGCGAGAAAAAAGGCCAAGCAAGAAAGAGAAAACAGAGAATACAGAGCAAAAAGGACTGAAACTGATGATGATGACGAAGAAGAAGAAGAATTCGTGGTATTATATGTTGATACGCTACTGGATTTGGAGTTGCCCGATGAGAAGAGAAAGCTTACTGATGACGAAATAGTCACTTTATGCTCCGAGTTTCTCAACGCCGGCACCGACACCACCTCCACAACATTACAGTGGATTATGGCGAATTTAGTGAAATACCCAGAAATCCAAAACAAGCTTTTTGTTGAGATGAAGGGAGTAATGGGAGATGGATCAAGGGAGGAGGTGAAGGAAGAGGATTTGGGGAAACTTCCATATTTGAAAGCAGTGGTTTTAGAAGGATTAAGAAGACATCCACCAGTGCATTTCGTGGTACCACATGCAGTGAAAGAAGATACAGAGTTGGAAAATTATGTGATACCAAGGAATGGGAGTGTACATTTCATGGTGGCGGAGATGGGTTGGGATTCAAAAGTGTGGGAAGATCCGATGGAGTTTAAGCCGGAGAGGTTCATGAAGGGCGGCGAAGAAGAAGAAATGGCGGGGTTTGATTTAACAGGGAGCAAAGAGATTAAGATGATGCCGTTCGGAGTAGGGAGAAGAATATGCCCAGCGATTGGACTGGCAATGCTTCATTTGGAATATTTCATTGCAAATTTGGTATGGCGGTTTCAATGGAAGGCGGTGGATGGAGACGCCGTCGATCTTGCGGAGAAGATAGAGTTCACTGTCCTCATGAAAAGGCCTCTCAAAGTTAACATATATTCAAGATTTTAA 1575 46.29 MEIWLLLVIISLSIYFLIITIFNKFQSSTKLPPGPPSIPILTNFLWLRRSPLQIESLLRSFIAKYGPILTLPIGPSPAIVIADRSIAHKALLQNAALFADRPPALAMSNIISTHHYNLASAPYGPLWRLLRRNLTSQILHPSRVKSYARSRKWVLDVLLNRFLSHSRSGTPVCVVDHFQYAMIYLLLIMCFGDKFDETQIKEIENVERELLVNLRRFIVLNFWPKLTNILFRNRKLMFSQLRIKQEKVLMPLINARKKAKQERENREYRAKRTETDDDDEEEEEFVVLYVDTLLDLELPDEKRKLTDDEIVTLCSEFLNAGTDTTSTTLQWIMANLVKYPEIQNKLFVEMKGVMGDGSREEVKEEDLGKLPYLKAVVLEGLRRHPPVHFVVPHAVKEDTELENYVIPRNGSVHFMVAEMGWDSKVWEDPMEFKPERFMKGGEEEEMAGFDLTGSKEIKMMPFGVGRRICPAIGLAMLHLEYFIANLVWRFQWKAVDGDAVDLAEKIEFTVLMKRPLKVNIYSRF 524
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
9 32416547 32418121 + CcPI632755_09g018980.1 Cco09g1898 188355
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cco09g1898 524 SUPERFAMILY Cytochrome P450 32 523 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco09g1898 524 PRINTS E-class P450 group I signature 181 199 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco09g1898 524 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco09g1898 524 PRINTS E-class P450 group I signature 415 439 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco09g1898 524 PRINTS E-class P450 group I signature 329 355 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco09g1898 524 PRINTS E-class P450 group I signature 459 469 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco09g1898 524 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco09g1898 524 PRINTS E-class P450 group I signature 309 326 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco09g1898 524 PRINTS E-class P450 group I signature 469 492 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco09g1898 524 PRINTS E-class P450 group I signature 374 392 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco09g1898 524 Coils Coil 258 278 - -
Cco09g1898 524 Pfam Cytochrome P450 32 512 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco09g1898 524 CDD CYP77_89 64 517 - -
Cco09g1898 524 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 13 520 IPR051103 GO:0016020(PANTHER)|GO:0016709(PANTHER)
Cco09g1898 524 FunFam Cytochrome P450 family protein 25 524 - -
Cco09g1898 524 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 462 471 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Cco09g1898 524 PRINTS P450 superfamily signature 320 337 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco09g1898 524 PRINTS P450 superfamily signature 375 386 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco09g1898 524 PRINTS P450 superfamily signature 460 469 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco09g1898 524 Gene3D Cytochrome P450 24 524 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco08g0236 Cco-Chr8:4116923 Cco09g1898 Cco-Chr9:32416547 4.80E-07 dispersed
Cco09g1898 Cco-Chr9:32416547 Cco09g1900 Cco-Chr9:32449273 1.20E-218 dispersed
Cco09g1898 Cco-Chr9:32416547 Cco09g1899 Cco-Chr9:32439858 2.90E-212 tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco09g1898 K24184 - csv:101220777 745.732