Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cco09g1898 | ATGGAGATATGGTTACTCCTCGTCATCATCTCCCTCTCCATTTATTTCCTCATAATCACCATTTTTAACAAATTCCAAAGCTCCACAAAGCTCCCGCCAGGTCCTCCTTCAATCCCCATCCTCACCAATTTCCTATGGCTCCGAAGATCCCCACTCCAAATCGAGTCTCTGTTGCGCAGTTTCATCGCCAAATATGGCCCCATCCTCACCCTCCCCATCGGCCCCAGCCCCGCCATCGTTATCGCCGACCGCTCTATCGCCCACAAAGCCCTCCTCCAAAACGCCGCTCTCTTCGCCGACCGCCCACCGGCCCTCGCCATGAGCAACATCATCTCCACCCACCATTACAACCTCGCCTCTGCTCCGTACGGCCCACTCTGGCGCCTCCTCCGCCGCAATCTTACTTCCCAAATCCTCCATCCTTCCCGTGTCAAGTCCTACGCCCGTTCTCGCAAGTGGGTTTTGGACGTTCTTCTTAATCGCTTTCTCTCTCACTCTCGATCCGGAACTCCCGTGTGCGTTGTCGATCATTTTCAGTACGCTATGATCTATTTGTTGTTGATTATGTGTTTTGGGGATAAGTTTGACGAAACCCAGATCAAGGAAATTGAGAATGTGGAGCGTGAGTTGCTAGTAAATCTTCGGCGTTTCATTGTCCTTAATTTTTGGCCAAAATTGACCAACATTTTGTTTCGAAATCGCAAACTGATGTTTTCGCAACTTAGAATAAAGCAAGAGAAGGTATTAATGCCTCTAATCAATGCGAGAAAAAAGGCCAAGCAAGAAAGAGAAAACAGAGAATACAGAGCAAAAAGGACTGAAACTGATGATGATGACGAAGAAGAAGAAGAATTCGTGGTATTATATGTTGATACGCTACTGGATTTGGAGTTGCCCGATGAGAAGAGAAAGCTTACTGATGACGAAATAGTCACTTTATGCTCCGAGTTTCTCAACGCCGGCACCGACACCACCTCCACAACATTACAGTGGATTATGGCGAATTTAGTGAAATACCCAGAAATCCAAAACAAGCTTTTTGTTGAGATGAAGGGAGTAATGGGAGATGGATCAAGGGAGGAGGTGAAGGAAGAGGATTTGGGGAAACTTCCATATTTGAAAGCAGTGGTTTTAGAAGGATTAAGAAGACATCCACCAGTGCATTTCGTGGTACCACATGCAGTGAAAGAAGATACAGAGTTGGAAAATTATGTGATACCAAGGAATGGGAGTGTACATTTCATGGTGGCGGAGATGGGTTGGGATTCAAAAGTGTGGGAAGATCCGATGGAGTTTAAGCCGGAGAGGTTCATGAAGGGCGGCGAAGAAGAAGAAATGGCGGGGTTTGATTTAACAGGGAGCAAAGAGATTAAGATGATGCCGTTCGGAGTAGGGAGAAGAATATGCCCAGCGATTGGACTGGCAATGCTTCATTTGGAATATTTCATTGCAAATTTGGTATGGCGGTTTCAATGGAAGGCGGTGGATGGAGACGCCGTCGATCTTGCGGAGAAGATAGAGTTCACTGTCCTCATGAAAAGGCCTCTCAAAGTTAACATATATTCAAGATTTTAA | 1575 | 46.29 | MEIWLLLVIISLSIYFLIITIFNKFQSSTKLPPGPPSIPILTNFLWLRRSPLQIESLLRSFIAKYGPILTLPIGPSPAIVIADRSIAHKALLQNAALFADRPPALAMSNIISTHHYNLASAPYGPLWRLLRRNLTSQILHPSRVKSYARSRKWVLDVLLNRFLSHSRSGTPVCVVDHFQYAMIYLLLIMCFGDKFDETQIKEIENVERELLVNLRRFIVLNFWPKLTNILFRNRKLMFSQLRIKQEKVLMPLINARKKAKQERENREYRAKRTETDDDDEEEEEFVVLYVDTLLDLELPDEKRKLTDDEIVTLCSEFLNAGTDTTSTTLQWIMANLVKYPEIQNKLFVEMKGVMGDGSREEVKEEDLGKLPYLKAVVLEGLRRHPPVHFVVPHAVKEDTELENYVIPRNGSVHFMVAEMGWDSKVWEDPMEFKPERFMKGGEEEEMAGFDLTGSKEIKMMPFGVGRRICPAIGLAMLHLEYFIANLVWRFQWKAVDGDAVDLAEKIEFTVLMKRPLKVNIYSRF | 524 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 9 | 32416547 | 32418121 | + | CcPI632755_09g018980.1 | Cco09g1898 | 188355 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cco09g1898 | 524 | SUPERFAMILY | Cytochrome P450 | 32 | 523 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco09g1898 | 524 | PRINTS | E-class P450 group I signature | 181 | 199 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco09g1898 | 524 | PRINTS | E-class P450 group I signature | 86 | 107 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco09g1898 | 524 | PRINTS | E-class P450 group I signature | 415 | 439 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco09g1898 | 524 | PRINTS | E-class P450 group I signature | 329 | 355 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco09g1898 | 524 | PRINTS | E-class P450 group I signature | 459 | 469 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco09g1898 | 524 | PRINTS | E-class P450 group I signature | 62 | 81 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco09g1898 | 524 | PRINTS | E-class P450 group I signature | 309 | 326 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco09g1898 | 524 | PRINTS | E-class P450 group I signature | 469 | 492 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco09g1898 | 524 | PRINTS | E-class P450 group I signature | 374 | 392 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco09g1898 | 524 | Coils | Coil | 258 | 278 | - | - | |
| Cco09g1898 | 524 | Pfam | Cytochrome P450 | 32 | 512 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco09g1898 | 524 | CDD | CYP77_89 | 64 | 517 | - | - | |
| Cco09g1898 | 524 | PANTHER | FLAVONOID 3'-MONOOXYGENASE-RELATED | 13 | 520 | IPR051103 | GO:0016020(PANTHER)|GO:0016709(PANTHER) | |
| Cco09g1898 | 524 | FunFam | Cytochrome P450 family protein | 25 | 524 | - | - | |
| Cco09g1898 | 524 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 462 | 471 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Cco09g1898 | 524 | PRINTS | P450 superfamily signature | 320 | 337 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco09g1898 | 524 | PRINTS | P450 superfamily signature | 375 | 386 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco09g1898 | 524 | PRINTS | P450 superfamily signature | 460 | 469 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco09g1898 | 524 | Gene3D | Cytochrome P450 | 24 | 524 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cco08g0236 | Cco-Chr8:4116923 | Cco09g1898 | Cco-Chr9:32416547 | 4.80E-07 | dispersed | |
| Cco09g1898 | Cco-Chr9:32416547 | Cco09g1900 | Cco-Chr9:32449273 | 1.20E-218 | dispersed | |
| Cco09g1898 | Cco-Chr9:32416547 | Cco09g1899 | Cco-Chr9:32439858 | 2.90E-212 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cco09g1898 | K24184 | - | csv:101220777 | 745.732 |