Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cco09g1899 | ATGGAGACCTGGTTCGTCTTCCTTATCTCTCTCTGCATTTGCTCTCTTCTCACCTCCATTTTTACCCATTTCCGAACCTCCACTAAGCTTCCACCAGGCCCTCCTTCAATCCCCATCCTCACCAATTTCATATGGCTCCGTCGATCCTCTCTCCAAATCGAGTCTCTGCTCCGGAGTTTCATCGCAAAATATGGCCCTGTTCTCACTCTCCGCATCGGCCCCACCTCCACCATCTTCATCGCCGACCACTCAATTGCCCACAAGATCCTTGTCCAAAACGGTGCTCTCTTTGCTGACCGTCCACCGGCGCTACCCGTAGGCAAGGTCATCACTTCCAACCAGCACAACATCAGCTCTGCCTCTTACGGCCCACTCTGGCGCCTCCTCCGACGTAATCTCACCTTCCAAATTCTCCATCCTTCCCGTGTTAGGTCTTACAGTCAAGCTCGCAAGTGGGTTTTGGATATTCTTTTCAATCGTCTTCAATCTCAATCTGAATCTGGAAGCCCCGTCTCAGTCATCGAGAATTTTCAGTACGCCATGTTTTGTTTGCTGGTGTTGATGTGTTTTGGGGGTAAGCTTGAGGAATCCAAGATCCGCGAAGTCGAGAACGTGGAACGAGCGCTTATATTGAGTTTTCCGCGTTTTAACATTCTCAATTTCTGGCCTAAATTTACGAAGATTTTTCTTCGAAAACGCTGGGAGGCGTTTTTCCAACTAAGAAGGAACCAAGCGAAGGTCCTAACCCGTTTGATCGAAGCCCGAAGGAAAGCCAATCAAAACAGAGCAAACAGAGCCGAAAATGAAGAAAGAGAAGAAGAAGAATTCGTGGTGTCATATGTCGATACACTGCTGGAATTGGAGCTCCCTGACGAGAAGAGAAAGCTCAATGATGACGAAATGGTCACATTATGCTCTGAGTTTCTCAACGCCGGCACAGATACAACGTCGACGGCCCTGCAATGGATAATGGCAAATTTAGTGAAATACCCGGAAATCCAAAACAAGCTTTATGCAGAGATGAAAGGAATAATGGGAGATGGAACAGGGGAAGAGGTGAAGGAAGAGGATTTGGGGAAACTTCCATATCTGAAGGCTGTGATTTTAGAAGGATTAAGAAGACACCCACCAGCGCATTTCGTGCTGCCACACTCAGTGAAAGAAGATACAGAGTTGGGAAATTATGTGATACCAAAGAAAGGGACTGTAAATTTCATGGTGGCGGAAATGGGTCTGGATCCGAAAGTGTGGGAAGATCCGAATGCGTTTAAGCCGGAGAGGTTCATGAAGGGCGGGAAAGAAGAAGAAGTAGCAGAGTTTGATGTAACAGGGAGCAAAGAGATAAAGATGATGCCGTTCGGAGCAGGGAGGAGGATATGTCCAGGATGGAGTGTGGCGATTCTCCATTTGGAGTATTTCGTTGCTAATTTGGTTTGGCGGTTCGAATGGAAGGCCGTGGATGGAGACGAAGTTGATATGTCGGAGAAGGTAGAGCTCACGGTCTCGATGAACAATCCCCTAAAAGCCAAAATACATCCAAGGATTCATATTTGA | 1554 | 47.3 | METWFVFLISLCICSLLTSIFTHFRTSTKLPPGPPSIPILTNFIWLRRSSLQIESLLRSFIAKYGPVLTLRIGPTSTIFIADHSIAHKILVQNGALFADRPPALPVGKVITSNQHNISSASYGPLWRLLRRNLTFQILHPSRVRSYSQARKWVLDILFNRLQSQSESGSPVSVIENFQYAMFCLLVLMCFGGKLEESKIREVENVERALILSFPRFNILNFWPKFTKIFLRKRWEAFFQLRRNQAKVLTRLIEARRKANQNRANRAENEEREEEEFVVSYVDTLLELELPDEKRKLNDDEMVTLCSEFLNAGTDTTSTALQWIMANLVKYPEIQNKLYAEMKGIMGDGTGEEVKEEDLGKLPYLKAVILEGLRRHPPAHFVLPHSVKEDTELGNYVIPKKGTVNFMVAEMGLDPKVWEDPNAFKPERFMKGGKEEEVAEFDVTGSKEIKMMPFGAGRRICPGWSVAILHLEYFVANLVWRFEWKAVDGDEVDMSEKVELTVSMNNPLKAKIHPRIHI | 517 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 9 | 32439858 | 32441411 | + | CcPI632755_09g018990.1 | Cco09g1899 | 188356 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cco09g1899 | 517 | SUPERFAMILY | Cytochrome P450 | 31 | 514 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco09g1899 | 517 | PRINTS | E-class P450 group I signature | 85 | 106 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco09g1899 | 517 | PRINTS | E-class P450 group I signature | 406 | 430 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco09g1899 | 517 | PRINTS | E-class P450 group I signature | 61 | 80 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco09g1899 | 517 | PRINTS | E-class P450 group I signature | 450 | 460 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco09g1899 | 517 | PRINTS | E-class P450 group I signature | 300 | 317 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco09g1899 | 517 | PRINTS | E-class P450 group I signature | 320 | 346 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco09g1899 | 517 | PRINTS | E-class P450 group I signature | 460 | 483 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco09g1899 | 517 | PRINTS | E-class P450 group I signature | 365 | 383 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco09g1899 | 517 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 453 | 462 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Cco09g1899 | 517 | CDD | CYP77_89 | 63 | 508 | - | - | |
| Cco09g1899 | 517 | PRINTS | P450 superfamily signature | 311 | 328 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco09g1899 | 517 | PRINTS | P450 superfamily signature | 366 | 377 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco09g1899 | 517 | PRINTS | P450 superfamily signature | 451 | 460 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco09g1899 | 517 | PRINTS | P450 superfamily signature | 460 | 471 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco09g1899 | 517 | Coils | Coil | 251 | 275 | - | - | |
| Cco09g1899 | 517 | Gene3D | Cytochrome P450 | 24 | 516 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco09g1899 | 517 | FunFam | Cytochrome P450 family protein | 24 | 516 | - | - | |
| Cco09g1899 | 517 | PANTHER | FLAVONOID 3'-MONOOXYGENASE-RELATED | 12 | 513 | IPR051103 | GO:0016020(PANTHER)|GO:0016709(PANTHER) | |
| Cco09g1899 | 517 | Pfam | Cytochrome P450 | 31 | 504 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cco06g0154 | Cco-Chr6:1574433 | Cco09g1899 | Cco-Chr9:32439858 | 7.90E-154 | dispersed | |
| Cco09g1899 | Cco-Chr9:32439858 | Cco03g0320 | Cco-Chr3:3564714 | 7.10E-54 | dispersed | |
| Cco09g1898 | Cco-Chr9:32416547 | Cco09g1899 | Cco-Chr9:32439858 | 2.90E-212 | tandem | |
| Cco09g1899 | Cco-Chr9:32439858 | Cco09g1900 | Cco-Chr9:32449273 | 2.00E-250 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cco09g1899 | K24184 | - | csv:101220777 | 877.085 |