Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cco09g1900 | ATGGAGATTTGGTTCATCATCCTCATCTCTCTCTGCATCTGCTCTCTTCTCACCTCCATTTTTACCCATTTCCGAACCTCCACTAAGCTTCCACCAGGCCCTCCTTCGATTCCCATCATCACTAATCTCCTATGGCTCCGCAAATCCCCTCTCCAAATTGAATCTCTTCTCCGCAGTTTCGTTGCCAAATATGGCCCTATTCTCACCCTCCCCATCGGCAATCGCCCCGCCATATTCATCGCCGACCGCTCTATTGCTCACAAAGCCCTTCTCCAAAACGGCGCCCTCTTCGCCGACCGTCCACCGGCACCTCCCTTGAGCAAGGTCATCACTTCCAACCAGCACAACATCAGCTCCGCCTCTTACGGCCCACTCTGGCGTCTCCTCCGCCGCAATCTCACTTCCCAAATCCTCCATCCTTCCCGTCTCAGATCCTACGCTCAAGCTCGCAAGTGGGTTTTGGATATTCTTTTCAATCGTCTTCAATCTCAGTCTGAATCTGAAAACTCCGTCTCAGTCATCCAGAATTTTCAGTACGCCATGTTTTGTTTGTTGGTGATCATGTGTTTTGGTGATAAGCTTGACGAATCCCAGATCCGCGAAGTCGAGAACGTGGAGCGAGCGCTTCTATTGAGTTTTGGGCGTTTCAACATTCTCAATTTCTGGCCTAAATTCACAAAGACTGTGCTTCGAAAACGATGGGAGGCGTTTCTCCAATTAAGAAGGAACCAACAAAAGGTTCTAATTCCTTTAATCGAAGCCCGAAGGAAGGCCAATCAAAACAGAGCAAACAGAGCTCAAACTGATGAAAAAGAAGAAGAAGAATTCGTGGTGTCATATGTTGATACGCTTCTCGAATTGGAGCTCCCCGACGAGAAGAGAAAGCTTACTAATGACGAACTGGTCACTTTATGCTCTGAATTCCTCAACGCCGGCACCGATACAACGTCCACGGCGTTGCAGTGGATAGTGGCCAATTTAATGAAAAACCCAGAAATCCAGAACAAGCTTTTTGCAGAGATGAAAGGAGTAATAGGAGATGGATCAAGGGAGGAGGTGAAGGAAGAGGATTTGGACAAACTTCCATATTTGAAAGCGGTGGTTTTAGAAGGATTAAGAAGACACCCACCAGGGCATTTCGTCTTACCACACGCAGTGAAAGAAGAGACAATGTTGGAAAATTATGTGATACCAAAGAATGGGACAGTAAATTTCATGGTGGCAGAGATGGGTTGGGATCCAAAAGTGTGGGAAGATCCTATGGAGTTTAAGCCGGAGAGATTCATGAAAGGCGGCGAAGGAGAAGAAGAAGGAGGTGGGTTTGATATAACAGGGAGCAAAGCGATAAAGATGATGCCGTTCGGAGTAGGGAGAAGGATGTGTCCTGGATTTGGTGTGGCAATTCTTCATTTGGAGTATTTCATTGCCAATCTGATATGGAGATTTGAATGGAAAGCCGTAAAGGGAGAGGAAGTTAGTCTGTCGGAGAAGGTGGAGTTCACAGTGGTAATGGAAAAGCCTCTGAAGGCCAATATAAATCCCAGGTGA | 1548 | 46.9 | MEIWFIILISLCICSLLTSIFTHFRTSTKLPPGPPSIPIITNLLWLRKSPLQIESLLRSFVAKYGPILTLPIGNRPAIFIADRSIAHKALLQNGALFADRPPAPPLSKVITSNQHNISSASYGPLWRLLRRNLTSQILHPSRLRSYAQARKWVLDILFNRLQSQSESENSVSVIQNFQYAMFCLLVIMCFGDKLDESQIREVENVERALLLSFGRFNILNFWPKFTKTVLRKRWEAFLQLRRNQQKVLIPLIEARRKANQNRANRAQTDEKEEEEFVVSYVDTLLELELPDEKRKLTNDELVTLCSEFLNAGTDTTSTALQWIVANLMKNPEIQNKLFAEMKGVIGDGSREEVKEEDLDKLPYLKAVVLEGLRRHPPGHFVLPHAVKEETMLENYVIPKNGTVNFMVAEMGWDPKVWEDPMEFKPERFMKGGEGEEEGGGFDITGSKAIKMMPFGVGRRMCPGFGVAILHLEYFIANLIWRFEWKAVKGEEVSLSEKVEFTVVMEKPLKANINPR | 515 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 9 | 32449273 | 32450820 | - | CcPI632755_09g019000.1 | Cco09g1900 | 188357 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cco09g1900 | 515 | CDD | CYP77_89 | 63 | 509 | - | - | |
| Cco09g1900 | 515 | SUPERFAMILY | Cytochrome P450 | 31 | 515 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco09g1900 | 515 | PRINTS | E-class P450 group I signature | 85 | 106 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco09g1900 | 515 | PRINTS | E-class P450 group I signature | 406 | 430 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco09g1900 | 515 | PRINTS | E-class P450 group I signature | 451 | 461 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco09g1900 | 515 | PRINTS | E-class P450 group I signature | 61 | 80 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco09g1900 | 515 | PRINTS | E-class P450 group I signature | 365 | 383 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco09g1900 | 515 | PRINTS | E-class P450 group I signature | 320 | 346 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco09g1900 | 515 | PRINTS | E-class P450 group I signature | 300 | 317 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco09g1900 | 515 | PRINTS | E-class P450 group I signature | 180 | 198 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco09g1900 | 515 | PRINTS | E-class P450 group I signature | 461 | 484 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco09g1900 | 515 | FunFam | Cytochrome P450 family protein | 24 | 515 | - | - | |
| Cco09g1900 | 515 | PANTHER | FLAVONOID 3'-MONOOXYGENASE-RELATED | 12 | 515 | IPR051103 | GO:0016020(PANTHER)|GO:0016709(PANTHER) | |
| Cco09g1900 | 515 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 454 | 463 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Cco09g1900 | 515 | Gene3D | Cytochrome P450 | 24 | 515 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco09g1900 | 515 | PRINTS | P450 superfamily signature | 311 | 328 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco09g1900 | 515 | PRINTS | P450 superfamily signature | 452 | 461 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco09g1900 | 515 | PRINTS | P450 superfamily signature | 366 | 377 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco09g1900 | 515 | PRINTS | P450 superfamily signature | 461 | 472 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco09g1900 | 515 | Pfam | Cytochrome P450 | 31 | 506 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cco01g0074 | Cco-Chr1:550378 | Cco09g1900 | Cco-Chr9:32449273 | 5.60E-192 | dispersed | |
| Cco05g2424 | Cco-Chr5:32762332 | Cco09g1900 | Cco-Chr9:32449273 | 1.20E-98 | dispersed | |
| Cco08g0953 | Cco-Chr8:21412664 | Cco09g1900 | Cco-Chr9:32449273 | 7.90E-98 | dispersed | |
| Cco09g1898 | Cco-Chr9:32416547 | Cco09g1900 | Cco-Chr9:32449273 | 1.20E-218 | dispersed | |
| Cco09g1900 | Cco-Chr9:32449273 | Cco06g0155 | Cco-Chr6:1584689 | 1.90E-51 | dispersed | |
| Cco09g1899 | Cco-Chr9:32439858 | Cco09g1900 | Cco-Chr9:32449273 | 2.00E-250 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cco09g1900 | K24184 | - | csv:101220777 | 808.135 |