Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco09g2082 ATGGCTGAAAATGAACAGGAGATGCGATCTTTGGCTTTGACGCCCACTTGGTCTGTTGCTTCTGTGCTGACTATTTTCGTTGCAGTCTCTTTGCTTGTTGAGCGGTCCATTCACCGGTTAAGCACTTGGTTGGGGAAAACTAACCGAAAGCCACTCTTTGAGGCAGTGGAGAAAATGAAAGAAGAGTTGATGCTGCTTGGATTTATTTCTCTCCTTTTAACTGCTACATCAAGCTCAATAGCAAATATCTGCATCCCATCAAAGTTCTACAGTACCCCTTTTACTCCATGCACCAAAGCTGAGGTTGATGAACAGACAGATGACAGTTCATCTGAGGAACGGAAACTCTATACAGTTTCTGTATTACCCCATTTGTTTAGGCGGATGCTTAATGCGAATAGGAAAACCTGCAAAAAGGGTTATGAGCCGTTTGTTTCATATGAGGGTCTTGAGCAATTGCATCGCTTTATCTTTATAATGGCAGTAACTCATATATCTTATAGCTGCTTAACAATGTTACTGGCTATTGTGAAGATTCACAGATGGAGAATCTGGGAGGATGAAGCCCACATGGACAGACATGATTCACTAAATGATATCACAAGAGAAATGACTCTGCGGAGGCAATCAACGTTTGTTCGATATCACACTTCAAATCCTATGACGCGGAACAGTTTTCTAATCTGGGTGACATGTTTTTTCCGGCAATTTGGGAATTCTGTAGTTCGTGCTGACTACCTCACACTCCGCAAAGGCTTCATCATGAATCACCACCTCTCCTTGACATATGATTTCCACAGCTACATGATTCGCTCCATGGAAGAAGAATTCCAAAGGATAGTAGGTGTGAGTGGCCCATTATGGGGATTCGTTGTTGCTTTCATGCTGTTTAATGTAAAAGGCTCTAATCTGTATTTCTGGATAGCAAGCATTCCAATTGCTCTTGTTCTGTTGGTGGGCACGAAGCTGCAGCATGTCATTGCAACGTTAGCATTGGAAAGTGCTGGTATAACTGGTTCATTTTCGGGTTCAAAGCTAAAGCCAAGAGATGATCTTTTTTGGTTTAAGAAGCCAGAGCTCCTCTTGTCCTTGATCCACTTTATCCTTTTCCAGAACGCATTCGAGTTGGCATCATTCTTCTGGTTCTGGTGGCAATTCGGATATAATTCTTGCTTCATTAGGAATCATATGCTTGTCTATGCAAGACTTATTTTGGGATTCGCTGGGCAGTTCCTTTGCAGCTACAGCACCTTGCCCTTATATGCTTTGGTAACTCAGATGGGAACAAACTATAAAGCTGCATTAATTCCACAAAGAATAAGGGAAACAATTCATGGATGGGGGAAGGCAGCAAGGAGGAAAAGAAGGCTTCGCATGTTTGCAGATGACACCACAATTCACACCGAAACAAGCACTGTGATGTCACTTGAGGATGATGACCGTCGGCTTATCGATGATACTTCTGAAACTACTGCTGACTATACGGCAATCGAACTACAGCCGACTTCCGTACAAGATGAACCTGACTCTGTTACTAATGAACGGCCAAGCAGGGCTAGAACGCCTCTTCTACAACCCTCTACATCTCTTTCTTCTGCAGTTGATCATAAGTTTGAGGTGGAAAACTTTATGAGAAGCTTTTCTATGCCAGTCAAAAGATAG 1662 42.72 MAENEQEMRSLALTPTWSVASVLTIFVAVSLLVERSIHRLSTWLGKTNRKPLFEAVEKMKEELMLLGFISLLLTATSSSIANICIPSKFYSTPFTPCTKAEVDEQTDDSSSEERKLYTVSVLPHLFRRMLNANRKTCKKGYEPFVSYEGLEQLHRFIFIMAVTHISYSCLTMLLAIVKIHRWRIWEDEAHMDRHDSLNDITREMTLRRQSTFVRYHTSNPMTRNSFLIWVTCFFRQFGNSVVRADYLTLRKGFIMNHHLSLTYDFHSYMIRSMEEEFQRIVGVSGPLWGFVVAFMLFNVKGSNLYFWIASIPIALVLLVGTKLQHVIATLALESAGITGSFSGSKLKPRDDLFWFKKPELLLSLIHFILFQNAFELASFFWFWWQFGYNSCFIRNHMLVYARLILGFAGQFLCSYSTLPLYALVTQMGTNYKAALIPQRIRETIHGWGKAARRKRRLRMFADDTTIHTETSTVMSLEDDDRRLIDDTSETTADYTAIELQPTSVQDEPDSVTNERPSRARTPLLQPSTSLSSAVDHKFEVENFMRSFSMPVKR 553
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 35230327 35236555 + CcPI632755_09g020820.1 Cco09g2082 188539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco09g2082 553 PANTHER MLO-LIKE PROTEIN 1 1 494 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
Cco09g2082 553 MobiDBLite consensus disorder prediction 503 530 - -
Cco09g2082 553 Pfam Mlo family 9 467 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco09g2082 Cco-Chr9:35230327 Cco10g0012 Cco-Chr10:197771 1.80E-84 dispersed
Cco05g1118 Cco-Chr5:10163969 Cco09g2082 Cco-Chr9:35230327 1.20E-126 transposed
Cco10g0068 Cco-Chr10:672511 Cco09g2082 Cco-Chr9:35230327 2.20E-106 transposed
Cco11g1866 Cco-Chr11:31332921 Cco09g2082 Cco-Chr9:35230327 2.70E-237 transposed
Cco08g1081 Cco-Chr8:22604995 Cco09g2082 Cco-Chr9:35230327 3.20E-75 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco09g2082 K08472 - csv:101217434 1062.75