Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco09g2095 ATGGATACAAGCTTGTTCAGGGGTCATCCTGAAAAGAGAGATTCATGGAGGACAATTTTCACTTTAGCTTATCAGAGTTTGGGGGTTGTTTATGGGGATTTAAGCACTTCTCCTTTGTATGTGTATAAAAGCACTTTTGCAGAGAACCTTCAGCACTCTGAGACTAATGAGGAGGTTTATGGGGTTCTTTGCTTTGTGTTTTGGACTTTGACACTTATCCCTTTACTTAAATATGTGTTTATAGTTCTTAGAGCTGATGATAATGGCGAAGGGGGAACTTTTGCTCTGTATTCATTGCTCTGTCGCCATGCTCGGTTGAGCTCTCTCCCAAATCACCAACTAGCGGATGAGGAGCTTTCTGCATATACAATTGACAGCCCACAAACTGAAAACACTACTAATTGTAGTTTTAGTTCTTGTCTGAAATCAACTTTGGAGAAATGTAAAGTTCTGCAAAAAATGTTGCTTGTTCTTGCTTTGATTGGGACTTGCATGGTTATTGGAGATGGTGTTCTCACACCAGCAATCTCAGTTTTTTCAGCTGTTTCTGGGCTTGAGTTATCCATGGCTAAGGAACATCACCAGTATATCGAAGTCCCTCTAGCGTGTGGCATATTGGTATTCTTATTCGCATTGCAACACTATGGAACGCATCAGGTTGGGTTCCTGTTTGCTCCAGTTGTAATTTTATGGCTTCTATGCATTAGTGCCATTGGTTTGTACAATATCTTCTATTGGAATCCCCTGGTTTACAAAGCACTCTCCCCATACTACATGTATAAGTTCTTAAAAAAGACCAAAAAGCAAGGTTGGATGGCACTCGGCGGAATCCTCTTGTGTATAACAGGCTCAGAAGCTATGTTTGCTGATCTTGGGCACTTCTCACAGTTTTCTATCAAGCTTGCTTTCACTTTTGCGGTTTATCCATCCTTAGTTCTTGCATATATGGGACAAGCTGCTTATCTTTCTAAGCATCACAATCTCGATAATGAATATCGGATCGGATTCTATGTTTCTGTTCCCGAGAAGGTAAGATGGCCAGTTCTTGCAATAGCAATACTTGCAGCAGTTGTGGGTAGTCAAGCGATCATCACCGGCACATTTTCGATCATCAAACAATGTTCTGCTTTGGGTTGTTTTCCAAGGGTAAAGATCATTCATACGTCTTCGAAAATACACGGCCAGATTTACATTCCCTTGATCAACTGGATACTAATGATATTGTGTTTGGCTGTTACCATTGGGTTTAGAGACACAAAACGACTAGGCAATGCAGCAGGGTTGGCGGTTATTACTGTTATGCTCGTCTCGACATGTCTAATGTCCCTTGTCATTGTATTATGTTGGCGTAAAAGTGTGTTGCTGGCCATAGCCTTCATACTCTTCTTTGGCTCCGTAGAAGCTCTCTACTTCTCTGCTTCTCTTATTAAGTTCTTTGAAGGGGCTTGGGTTCCTATTGTTCTTTCATTGACCTTCCTTGTGGTTATGTATGTTTGGCACTATGGCACAGTGAAGAAATATGAAGCTGATGTTGAAAACAAAGTCCCTATAAATTGGCTCCTCAGTATAGGACCCAAAATTGGGATCGTTCGAGTCCGGGGGATCGGCCTTGTACATACCGAACTAGTTTCGGGGATCCCTGCCATTTTCTCTCATTTTGTCACCAACCTTCCAGCCTTTCATCAAATTCTAGTCTTCCTCTGCATCAAATCTGTCACAGTGCCTCATGTGAGGCCTGAGGAAAGGTTTTTAGTTGGACGAGTTGGGCCAAAGGAGTATCGACTCTACCGTTGCATCGCACGGTATGGCTATCGTGACATGCACAAGGACAACTTGGAGTTCGAGAGAGATCTTGCTTGCAGCATTGCAGAATTCATACGGTCCGAGAGAACAGAATGCAACAATTTTAGACAAGGAGACTTGGACGACAATGAAAGAATGACAGTGATTGGGACTTCATCAACCCAACTAGATGGTATACAAATGTGTGAAAACGAAACATATGCTTCGCCAGAGACAATAAAGTCGGAGCAGTTGAGAAAAAGAGTTAGATTCGTTCTCCCCGAGAGTCCGAAAATGAACATCGATACGAGGGGAGAGTTGCAAGAGTTGATGGAGGCAAGGGAGGCAGGAATAGCATTTATAATGGGGCATTCATATGTGAAGGCAAAGAAAGGATCAGGTTGGATGAAGAAGCTTGTGATTAATTATGGATATGATTTCTTGAGGAAAAATTCAAGGGGGCCATCTTATGCTTTGAGCATTCCTTATGCTTCTACTCTTGAGGTTGGTATGGTTTATTATGTTTAA 2310 42.03 MDTSLFRGHPEKRDSWRTIFTLAYQSLGVVYGDLSTSPLYVYKSTFAENLQHSETNEEVYGVLCFVFWTLTLIPLLKYVFIVLRADDNGEGGTFALYSLLCRHARLSSLPNHQLADEELSAYTIDSPQTENTTNCSFSSCLKSTLEKCKVLQKMLLVLALIGTCMVIGDGVLTPAISVFSAVSGLELSMAKEHHQYIEVPLACGILVFLFALQHYGTHQVGFLFAPVVILWLLCISAIGLYNIFYWNPLVYKALSPYYMYKFLKKTKKQGWMALGGILLCITGSEAMFADLGHFSQFSIKLAFTFAVYPSLVLAYMGQAAYLSKHHNLDNEYRIGFYVSVPEKVRWPVLAIAILAAVVGSQAIITGTFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPLINWILMILCLAVTIGFRDTKRLGNAAGLAVITVMLVSTCLMSLVIVLCWRKSVLLAIAFILFFGSVEALYFSASLIKFFEGAWVPIVLSLTFLVVMYVWHYGTVKKYEADVENKVPINWLLSIGPKIGIVRVRGIGLVHTELVSGIPAIFSHFVTNLPAFHQILVFLCIKSVTVPHVRPEERFLVGRVGPKEYRLYRCIARYGYRDMHKDNLEFERDLACSIAEFIRSERTECNNFRQGDLDDNERMTVIGTSSTQLDGIQMCENETYASPETIKSEQLRKRVRFVLPESPKMNIDTRGELQELMEAREAGIAFIMGHSYVKAKKGSGWMKKLVINYGYDFLRKNSRGPSYALSIPYASTLEVGMVYYV 769
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 35333752 35337520 - CcPI632755_09g020950.1 Cco09g2095 188552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco09g2095 769 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 14 769 IPR003855 GO:0006813(PANTHER)|GO:0015079(PANTHER)|GO:0015079(InterPro)|GO:0016020(PANTHER)|GO:0016020(InterPro)|GO:0071805(InterPro)
Cco09g2095 769 Pfam K+ potassium transporter C-terminal domain 534 767 IPR053952 -
Cco09g2095 769 NCBIfam potassium uptake protein 22 769 IPR003855 GO:0015079(InterPro)|GO:0016020(InterPro)|GO:0071805(InterPro)
Cco09g2095 769 Pfam K+ potassium transporter integral membrane domain 22 521 IPR053951 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco05g1438 Cco-Chr5:16234497 Cco09g2095 Cco-Chr9:35333752 2.50E-252 dispersed
Cco07g0523 Cco-Chr7:6586106 Cco09g2095 Cco-Chr9:35333752 5.50E-282 dispersed
Cco09g2095 Cco-Chr9:35333752 Cco11g0046 Cco-Chr11:522500 3.50E-190 dispersed
Cco03g0061 Cco-Chr3:595701 Cco09g2095 Cco-Chr9:35333752 3.70E-229 transposed
Cco10g1428 Cco-Chr10:27365148 Cco09g2095 Cco-Chr9:35333752 0.00E+00 wgd
Cco05g2788 Cco-Chr5:35655765 Cco09g2095 Cco-Chr9:35333752 0.00E+00 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco09g2095 K03549 - csv:101218141 1479.92