Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco09g2104 ATGGGGCGTTTTGGGAACTTGGGAAATGGTGACAAATTGATGACGATGGAAAATGGGGGCACAAAGAGGTATGAAAATGAAGCAGTGGCATTGAGTTGCACAATGGTGGGCGCTGGCAGCGATGGCTCGCTTCATACCTGCGCAAGGGTTTGCCTTATCCACCAAAATGAGTCCCTCATCTTTTTTACTTATGTTCAGCCAACGCTTCCCGTCACTAACTATAGGTTTGAATCCACGGGTGTTCGTCCAGAATACTTGAGAGATGCAATGCCATTGAAGCAAGTTCAAAAGAAAATTCAAGAGTTTCTATGCAATGGAGAACCAATGTGGAAAATTCGACCTGGAGCTACTGGAAAAGCAAGGATTCTTGTGGGTCATGGCGTAGAAGAAGACCTTACACGTTTGCACATTGACTATCCTAATTTCATGATAAGATACAATATGGAAAATGGGAAGAAAGAGGGTTATGAGGAGTGTGTTGCCACAATGAGATTGTACATGAGAATGAAATCCCAAGTTCACAAAAGAGAGGATTATCCGTTGGCTTCTGATCCACAAAATAAACATAACTTTGCAGTTTGGAAGCAATTTGAGCTTGAGAAGATGAGCCCACAACAAATGTTGCAAATTTCAAGATCTGATTACTATTGTTGGTGCTTAGACTCCAACCCTTCATAA 678 42.04 MGRFGNLGNGDKLMTMENGGTKRYENEAVALSCTMVGAGSDGSLHTCARVCLIHQNESLIFFTYVQPTLPVTNYRFESTGVRPEYLRDAMPLKQVQKKIQEFLCNGEPMWKIRPGATGKARILVGHGVEEDLTRLHIDYPNFMIRYNMENGKKEGYEECVATMRLYMRMKSQVHKREDYPLASDPQNKHNFAVWKQFELEKMSPQQMLQISRSDYYCWCLDSNPS 225
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 35400630 35403164 - CcPI632755_09g021040.1 Cco09g2104 188561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco09g2104 225 Gene3D - 23 151 IPR036397 GO:0003676(InterPro)
Cco09g2104 225 PANTHER RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED 154 221 IPR047021 GO:0004527(InterPro)|GO:0004527(PANTHER)|GO:0005634(PANTHER)
Cco09g2104 225 SMART exoiiiendus 27 175 IPR013520 -
Cco09g2104 225 SUPERFAMILY Ribonuclease H-like 29 170 IPR012337 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco09g2104 Cco-Chr9:35400630 Cco09g2105 Cco-Chr9:35423214 9.90E-69 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco09g2104 - - - 0.0