Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cco09g2104 | ATGGGGCGTTTTGGGAACTTGGGAAATGGTGACAAATTGATGACGATGGAAAATGGGGGCACAAAGAGGTATGAAAATGAAGCAGTGGCATTGAGTTGCACAATGGTGGGCGCTGGCAGCGATGGCTCGCTTCATACCTGCGCAAGGGTTTGCCTTATCCACCAAAATGAGTCCCTCATCTTTTTTACTTATGTTCAGCCAACGCTTCCCGTCACTAACTATAGGTTTGAATCCACGGGTGTTCGTCCAGAATACTTGAGAGATGCAATGCCATTGAAGCAAGTTCAAAAGAAAATTCAAGAGTTTCTATGCAATGGAGAACCAATGTGGAAAATTCGACCTGGAGCTACTGGAAAAGCAAGGATTCTTGTGGGTCATGGCGTAGAAGAAGACCTTACACGTTTGCACATTGACTATCCTAATTTCATGATAAGATACAATATGGAAAATGGGAAGAAAGAGGGTTATGAGGAGTGTGTTGCCACAATGAGATTGTACATGAGAATGAAATCCCAAGTTCACAAAAGAGAGGATTATCCGTTGGCTTCTGATCCACAAAATAAACATAACTTTGCAGTTTGGAAGCAATTTGAGCTTGAGAAGATGAGCCCACAACAAATGTTGCAAATTTCAAGATCTGATTACTATTGTTGGTGCTTAGACTCCAACCCTTCATAA | 678 | 42.04 | MGRFGNLGNGDKLMTMENGGTKRYENEAVALSCTMVGAGSDGSLHTCARVCLIHQNESLIFFTYVQPTLPVTNYRFESTGVRPEYLRDAMPLKQVQKKIQEFLCNGEPMWKIRPGATGKARILVGHGVEEDLTRLHIDYPNFMIRYNMENGKKEGYEECVATMRLYMRMKSQVHKREDYPLASDPQNKHNFAVWKQFELEKMSPQQMLQISRSDYYCWCLDSNPS | 225 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 35400630 | 35403164 | - | CcPI632755_09g021040.1 | Cco09g2104 | 188561 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cco09g2104 | 225 | Gene3D | - | 23 | 151 | IPR036397 | GO:0003676(InterPro) | |
Cco09g2104 | 225 | PANTHER | RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED | 154 | 221 | IPR047021 | GO:0004527(InterPro)|GO:0004527(PANTHER)|GO:0005634(PANTHER) | |
Cco09g2104 | 225 | SMART | exoiiiendus | 27 | 175 | IPR013520 | - | |
Cco09g2104 | 225 | SUPERFAMILY | Ribonuclease H-like | 29 | 170 | IPR012337 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cco09g2104 | Cco-Chr9:35400630 | Cco09g2105 | Cco-Chr9:35423214 | 9.90E-69 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cco09g2104 | - | - | - | 0.0 |