Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cco09g2197 | ATGGCCGGTAAAGGAGAAGGTCCGGCAATTGGAATCGATCTTGGAACCACCTACTCTTGCGTCGGTGTGTGGCAGCATGATCGAGTTGAGATCATAGCCAACGACCAGGGCAACAGGACCACGCCATCGTATGTTGCTTTCACCGACACTGAACGCTTGATCGGTGATGCGGCCAAGAATCAGGTCGCCATGAACCCTATTAACACCGTTTTTGATGCTAAGCGTTTAATTGGCCGAAGATTTAGCGATCCATCGGTCCAGAGTGATATCAAGCTCTGGCCATTTAAAGTTATTGCCGGCCCTAGTGACAAGCCCATGATTGTTGTAAACTACAAGGGTGAAGAGAAGCAGTTTTCGGCTGAAGAAATCTCTTCTATGGTGCTTATAAAGATGAAGGAGATTGCCGAGGCGTATTTGGGAACAACAGTGAAGAACGCCGTCGTCACTGTTCCTGCCTACTTCAACGATTCACAGAGACAGGCCACCAAGGACGCCGGGGTCATTTCAGGTCTAAATGTAATGCGTATCATCAATGAACCAACTGCTGCCGCCATTGCTTATGGTCTCGACAAGAAGTCCAGCAGCTCCGGTGAAAAGAATGTTCTAATTTTTGATCTGGGCGGTGGTACCTTTGATGTTTCATTGCTCACAATCGAAGAAGGTATCTTTGAGGTGAAAGCAACTGCAGGAGACACTCATCTGGGTGGTGAAGATTTTGATAACAGATTGGTTAACCACTTCGTGCAAGAATTCAAGAGAAAGAATAAGAAAGACATTAGTGGGAATCCCAGGGCTCTTAGGCGGTTGAGAACTGCTTGTGAAAGGGCTAAGAGGACACTTTCTTCTACAGCTCAAACTACAATTGAGATTGACTCTCTTTACGAAGGAATTGACTTCTATTCAACCATTACCCGTGCTAGATTTGAGGAACTCAATATGGATCTTTTCAGGAAGTGTATGGAACCAGTTGAGAAGTGCTTGAGAGATGCTAAGATGGACAAAAGCAGTGTCCATGATGTTGTTCTTGTTGGTGGTTCCACTAGAATTCCCAAGGTGCAGCAATTGTTGCAGGATTTCTTCAATGGCAAAGAGCTTTGCAAGAGTATCAACCCTGATGAAGCTGTTGCCTATGGAGCTGCTGTCCAAGCTGCCATCTTGAGCGGTGAGGGTAATGAGAAGGTTCAAGATCTTCTGCTTTTGGATGTTACCCCTCTTTCACTTGGACTCGAAACAGCTGGCGGTGTTATGACTGTCTTGATTCCAAGGAATACCACCATCCCCACCAAGAAAGAACAAGTTTTCTCTACATACTCTGACAATCAACCTGGTGTTTTGATCCAAGTCTATGAAGGTGAGAGAGCAAGAACTCGCGACAACAACTTGCTTGGAAAATTTGAGCTTTCCGGAATCCCTCCAGCCCCTAGAGGTGTTCCTCAGATCACAGTCTGCTTCGACATTGATGCTAACGGTATTCTGAATGTTTCTGCCGAAGATAAAACCACGGGACAGAAGAACAAGATCACAATCACCAACGACAAAGGGCGGTTGTCGAAGGAAGAGATTGAGAAGATGGTGCAAGAAGCAGAGAAGTACAAGGCCGACGATGAAGAACACAAGAAGAAAGTTGAAGCTAAGAACTCGTTGGAGAACTATGCTTATAACATGAGAAACACTGTGAGGGATGAGAAGTTCAGCTCAAAATTGGATCCGGCGGACAAGAAGAAGATTGAGGATGCCATCGAACAGGCAATCCAATGGCTTGACAACAACCAACTTGCTGAGGCTGATGAGTTTGAAGACAAAATGAAAGAGCTTGAGAGTATTTGCAACCCAATTGTTGCTAAGATGTACCAGGGTACTGGTGGGCCTGGCATGGGCGGTGCCGGTATGGATGACGACGATGTTCCTCCTCCGTCCGGTGGTAGCGGCGCCGGTCCTAAGATCGAGGAAGTTGACTAA | 1959 | 46.35 | MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPINTVFDAKRLIGRRFSDPSVQSDIKLWPFKVIAGPSDKPMIVVNYKGEEKQFSAEEISSMVLIKMKEIAEAYLGTTVKNAVVTVPAYFNDSQRQATKDAGVISGLNVMRIINEPTAAAIAYGLDKKSSSSGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRLVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERARTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKADDEEHKKKVEAKNSLENYAYNMRNTVRDEKFSSKLDPADKKKIEDAIEQAIQWLDNNQLAEADEFEDKMKELESICNPIVAKMYQGTGGPGMGGAGMDDDDVPPPSGGSGAGPKIEEVD | 652 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 36295047 | 36297421 | - | CcPI632755_09g021970.1 | Cco09g2197 | 188654 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cco09g2197 | 652 | ProSitePatterns | Heat shock hsp70 proteins family signature 2. | 203 | 216 | IPR018181 | - | |
Cco09g2197 | 652 | Coils | Coil | 521 | 541 | - | - | |
Cco09g2197 | 652 | FunFam | Heat shock 70 kDa protein | 539 | 652 | - | - | |
Cco09g2197 | 652 | FunFam | Heat shock 70 kDa protein | 198 | 261 | - | - | |
Cco09g2197 | 652 | Gene3D | - | 71 | 126 | - | - | |
Cco09g2197 | 652 | PRINTS | 70kDa heat shock protein signature | 58 | 66 | - | - | |
Cco09g2197 | 652 | PRINTS | 70kDa heat shock protein signature | 396 | 415 | - | - | |
Cco09g2197 | 652 | PRINTS | 70kDa heat shock protein signature | 8 | 21 | - | - | |
Cco09g2197 | 652 | PRINTS | 70kDa heat shock protein signature | 36 | 48 | - | - | |
Cco09g2197 | 652 | PRINTS | 70kDa heat shock protein signature | 209 | 219 | - | - | |
Cco09g2197 | 652 | PRINTS | 70kDa heat shock protein signature | 337 | 353 | - | - | |
Cco09g2197 | 652 | PRINTS | 70kDa heat shock protein signature | 146 | 166 | - | - | |
Cco09g2197 | 652 | PRINTS | 70kDa heat shock protein signature | 369 | 389 | - | - | |
Cco09g2197 | 652 | PRINTS | 70kDa heat shock protein signature | 477 | 493 | - | - | |
Cco09g2197 | 652 | MobiDBLite | consensus disorder prediction | 617 | 652 | - | - | |
Cco09g2197 | 652 | CDD | HSPA1-2_6-8-like_NBD | 9 | 387 | - | - | |
Cco09g2197 | 652 | SUPERFAMILY | Actin-like ATPase domain | 8 | 191 | IPR043129 | - | |
Cco09g2197 | 652 | SUPERFAMILY | Heat shock protein 70kD (HSP70), C-terminal subdomain | 543 | 625 | IPR029048 | - | |
Cco09g2197 | 652 | Gene3D | - | 10 | 384 | - | - | |
Cco09g2197 | 652 | SUPERFAMILY | Heat shock protein 70kD (HSP70), peptide-binding domain | 392 | 549 | IPR029047 | - | |
Cco09g2197 | 652 | FunFam | Heat shock 70 kDa | 391 | 545 | - | - | |
Cco09g2197 | 652 | FunFam | Heat shock protein 70 | 10 | 197 | - | - | |
Cco09g2197 | 652 | FunFam | Heat shock cognate 70 kDa protein 2 | 319 | 366 | - | - | |
Cco09g2197 | 652 | SUPERFAMILY | Actin-like ATPase domain | 197 | 388 | IPR043129 | - | |
Cco09g2197 | 652 | PANTHER | HEAT SHOCK PROTEIN 70KDA | 9 | 583 | IPR013126 | GO:0005524(InterPro)|GO:0005737(PANTHER)|GO:0140662(InterPro) | |
Cco09g2197 | 652 | ProSitePatterns | Heat shock hsp70 proteins family signature 1. | 12 | 19 | IPR018181 | - | |
Cco09g2197 | 652 | Pfam | Hsp70 protein | 9 | 618 | IPR013126 | GO:0005524(InterPro)|GO:0140662(InterPro) | |
Cco09g2197 | 652 | Gene3D | Actin; Chain A, domain 4 | 235 | 318 | - | - | |
Cco09g2197 | 652 | Gene3D | - | 192 | 366 | - | - | |
Cco09g2197 | 652 | Gene3D | - | 545 | 619 | IPR029048 | - | |
Cco09g2197 | 652 | ProSitePatterns | Heat shock hsp70 proteins family signature 3. | 340 | 354 | IPR018181 | - | |
Cco09g2197 | 652 | FunFam | Heat shock 70 kDa | 235 | 318 | - | - | |
Cco09g2197 | 652 | FunFam | Heat shock 70 kDa protein | 71 | 126 | - | - | |
Cco09g2197 | 652 | Gene3D | Substrate Binding Domain Of DNAk; Chain A, domain 1 | 391 | 544 | IPR029047 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cco04g1022 | Cco-Chr4:25812226 | Cco09g2197 | Cco-Chr9:36295047 | 0.00E+00 | dispersed | |
Cco05g0607 | Cco-Chr5:4932495 | Cco09g2197 | Cco-Chr9:36295047 | 3.90E-77 | dispersed | |
Cco09g2197 | Cco-Chr9:36295047 | Cco11g1154 | Cco-Chr11:22565194 | 0.00E+00 | dispersed | |
Cco09g2190 | Cco-Chr9:36255452 | Cco09g2197 | Cco-Chr9:36295047 | 0.00E+00 | proximal |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cco09g2197 | K03283 | - | csv:101210925 | 1221.07 |