Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco09g2207 ATGGAGAAGGCAGCTGGTAGAATGTTTGAGAAGGCAAAGCCATATTTGGGAGCAATTGCATTAAGATTTGCTTCAGCAGGAATGTCAATTATTTCAAAGGCTGCTCTAAACCAAGGAATGAACCAACTTGTTACCATTGTTTATCGTTACTCTATTGGTGCCATTGTTGTTGCTCCTTTTGCTTTTGTATTGGATAGGAAAATAAGACCAAAGATGACTCTCCCGATCTTCGCCAAGATTCTTCTCCTTGGCTTACTTGAGCCTGTAATAGCCCAGAGCTTGATTTACTCTGCTACTAAATACACAACTGCTACTTTTGCAACTGCCATGTGCAATATTCTTCCTGCCTTTGCATTTCTAATGGCTTGGATTTGTAGAATGGAGAAGGTGAACATTAGAAGATTAAGAAGCCAGGCAAAGATTTTAGGGACTTTAGTTACAGTTGGAGGAGCAATGATGATGGCTCTTATAAAAGGGCCTTTATTGAGTTTGCCTTGGACCAAACAAAATTTCAATAATCCTCATTCTTATTCCACTCTTCCAAATAACCAACAACCTCTTAAGGCTGCCATTGTTATCACCATTTCAAGTATTTGTTCCTCAGCCTTCACCATTCTTCTGGCACATACAATAAGAACATACCCAGCTGAGCTCACACTAACAACATTCATATGTTTGGCTGGAGCTGTGGAAAGTACTATTTTAGCCTTAGCATTTGAATGGGACAATCCATCTGCATGGGCTTTACATGCAGATTCCATACTCTTAGCTGCCCTCTATGGTGGTATAATATCTTCTGGAATTGCTTATTATCTTCAAGGAGTAGTGGTGAAGTTAAAAGGACCTGTGTTTGTAACTGCATTCAATCCTCTCAGCATGGTCATAGTTGCCGTAATTAGTTCATTCATATTCGCTGAGACATTGCGCTTAGGAAGGGTCATTGGAGCAGTTGTGATAATTATAGGCCTTTACTTGATCAACAATAAGCAACTGATCAAATCCACTGCTTCAAATTGGAATATGGTGCCTTCCAAAGGAGAAATGAACAAGCCACATGGTTCCGTAGAAGCCAATTGA 1077 39.93 MEKAAGRMFEKAKPYLGAIALRFASAGMSIISKAALNQGMNQLVTIVYRYSIGAIVVAPFAFVLDRKIRPKMTLPIFAKILLLGLLEPVIAQSLIYSATKYTTATFATAMCNILPAFAFLMAWICRMEKVNIRRLRSQAKILGTLVTVGGAMMMALIKGPLLSLPWTKQNFNNPHSYSTLPNNQQPLKAAIVITISSICSSAFTILLAHTIRTYPAELTLTTFICLAGAVESTILALAFEWDNPSAWALHADSILLAALYGGIISSGIAYYLQGVVVKLKGPVFVTAFNPLSMVIVAVISSFIFAETLRLGRVIGAVVIIIGLYLINNKQLIKSTASNWNMVPSKGEMNKPHGSVEAN 358
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 36400063 36403433 + CcPI632755_09g022070.1 Cco09g2207 188664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco09g2207 358 PANTHER WAT1-RELATED PROTEIN 19 326 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Cco09g2207 358 Pfam EamA-like transporter family 15 153 IPR000620 GO:0016020(InterPro)
Cco09g2207 358 Pfam EamA-like transporter family 188 327 IPR000620 GO:0016020(InterPro)
Cco09g2207 358 SUPERFAMILY Multidrug resistance efflux transporter EmrE 48 156 - -
Cco09g2207 358 SUPERFAMILY Multidrug resistance efflux transporter EmrE 256 329 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco09g2207 Cco-Chr9:36400063 Cco09g2209 Cco-Chr9:36453328 8.50E-99 dispersed
Cco09g2207 Cco-Chr9:36400063 Cco09g2208 Cco-Chr9:36426993 1.70E-86 tandem
Cco04g1041 Cco-Chr4:25966314 Cco09g2207 Cco-Chr9:36400063 1.30E-97 wgd
Cco07g0317 Cco-Chr7:3183075 Cco09g2207 Cco-Chr9:36400063 8.80E-99 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco09g2207 - - - 0.0