Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco09g2295 ATGAAGGCAAAGATCGAAAAGCGCGTTTTTGCGCTGACTACTTGTAAGAAAATAAAACCAATTATGGCTCGCCACCTTTCTTCCTCCGATCAACAGCTGTGGATTTGCCGGAGGAGGCGCCCTGAAGTTCGTCTGAGCTCCGATGAGTTGCTGGAAGAGTTTTCCGGCAATGTGTTCTCTCCTTCTTCTGTTTCCTCTGTTTCTTCACTCGTCCCTGGCGCTGGAAATGCTCCATTTGTTGTGGCTCGCGGTGGATTTTCAGGGCTTTTTCCTGATTCATGTGGAGTTGCCTACAATTTTGCAGTTATGGTTAGTGTTCCTGATGTGATCTTATGGTGCGATGTGCAATTAACCAAAGATGGAGTTGGAATTTGTCTTCCGGATCTGAGGCTTGACAATGCTACTGATGCTCCGACTATTCTAGGGACAAACCGCAGCAGTGTCTATCTTGTTAATGGTGTCCGTACTAAGGGATTGTTTACGGTCGATTTCAATTTCAAAGAACTGGAAAATGTTTCTCTTATTCAAGGTATCTATTCTCGAACTAATAAGTTCGATGGCAATGAGTTTGTTATTCTCACTCCTGAAGATGTGGTTAATCAGTTCAAGCCTCCAGGATTTTGGCTAAATATTCAGCATGATGTGTTCTTCACGCAACATAACGTGAGCATGAGGAACTTTGTACTTTCTGTATCCAGAAGCATCATTGTTAACTATATATCATCACCAGAGGTCGGATTTCTCAGAAGTATAGCTGCAAGGGTTCCCCGCACAACAAAGTTGATCCTTCGGGTCTTAGGACCCACTGATACTGAGATTACCACCAATCAGACATATGCCTCTCTCTTAGGAAATCTCACCTTTATCAAGACATTTGCTTCTGGAATTCTTGTTCCTAAGACTTATATATGGCCCATTAGTAACGATGGTTACATACAACCTCAAACCTCTCTTGTTTCTGATGCTCACAAAGCACAGCTGGAAATTTTTGCATCAGACTTCTTTAGTGACCTTCCATTAAGCTACAATTACAGTTACGATCCCGTTACTGAATACCTGTCTTACTTTGACAATGGTAAATTTTCAGTTGATGGTGTGCTCACTGATTTCCCTATTTCTCCATCGTCAGCTATTGACTGTTTTGCTCATTTGGATAAGAACGCCAAAAGTCAAGCCAAGCCTTTGGTTATTTCAAAATTTGGAGCTAGTGGAGACTTTCCTGCTTGCACAGATTTGGCATACTCGAATGCCATTTCAGATGGTGTTGAAGTACTTGACTGTCCTGTTCAAATAACAAAAGACGGGATACCATTTTGCATGAGCTCAATTAATCTCATCGACAGCACAAAAATATCTCAATCACCATTCATTAACCGTTCAAAAAAAATTCCCGAAATTAGTTCTAACGAAGGAATTTTTGCTTTTGACTTAACATGGGAAGAGATTCAAGGCCTAACCCCGTCAATATTGAACCCTTATTCGAAGTTCACGTTGTTCCGAAACCCAAGGTTCAGAAACAGTGGAAAATTCATAACACTACCTGATTTCTTGGCCTTGGCAAAGAATGCAAGCACTCTTTCTGGTGTCTTGATCCATATTGAGCATGCAGCCTACCTTGCTAAGGATCAGGGTTTAAGTGTAACTGATGCGGTCTTTGGTTCCTTAAGCAAAGCTGGTTATGATAATCAGACAGCCCTTAAAGTATTGATTCAATCTCCAGATAGTGCTGTTCTAAAAAAATTTAAACAGGAAAATAACAGTTACGAGCTTGTTTATCAAGTTGACATGTCAATTGGGGATGTGCTCAATTCAACTGTTGTGGACATAAAGAGTTTTGCCAACTCTGTGACTATCAGCAAGCCCTCTGTCTTCCCTGAAAATCAGCTATTTCTCGCTGGATCTACAGATGTTGTGAAGAAGCTGCAAGCACTTAAGCTCTCTGTATATGTGGAAACCTTCGACAATGAATTTGTCTCTCAAGCATGGGATTTCTTCTCCGACGCAACTGTAGAGATCAACTCATATGTTTTGGGAGCCAACATCGATGGAGTCATCACCAGCTTCCCAAAGACATCTGCTAGATATAAAAAGAACCGATGTTTAACAATGAAAGAAACACCTAATTACATGAGCCCTGTCCAGCCTGGTAGCTTGTTGCAACTTGTTACTCCAGACTACCTGCCTCCAAAGACAGCTCCGAGCCCGGTTTTGAATGACAAAGACGTAGCCGAGCCACCACTGCCTCCGGTTTCGGCCAGAGCCCCAGCACCTGCTGTGGACAGTGGCCCTACAGCAGCATCTCCAACTTCTAAACCCAATGGACAACCTAAGCTTGGAGCTGGAGCAGGCTTCTTGTTCTTGAACCTTGCCATACTTTCCATTGCTCTTCTTCCATTCTGA 2400 42.54 MKAKIEKRVFALTTCKKIKPIMARHLSSSDQQLWICRRRRPEVRLSSDELLEEFSGNVFSPSSVSSVSSLVPGAGNAPFVVARGGFSGLFPDSCGVAYNFAVMVSVPDVILWCDVQLTKDGVGICLPDLRLDNATDAPTILGTNRSSVYLVNGVRTKGLFTVDFNFKELENVSLIQGIYSRTNKFDGNEFVILTPEDVVNQFKPPGFWLNIQHDVFFTQHNVSMRNFVLSVSRSIIVNYISSPEVGFLRSIAARVPRTTKLILRVLGPTDTEITTNQTYASLLGNLTFIKTFASGILVPKTYIWPISNDGYIQPQTSLVSDAHKAQLEIFASDFFSDLPLSYNYSYDPVTEYLSYFDNGKFSVDGVLTDFPISPSSAIDCFAHLDKNAKSQAKPLVISKFGASGDFPACTDLAYSNAISDGVEVLDCPVQITKDGIPFCMSSINLIDSTKISQSPFINRSKKIPEISSNEGIFAFDLTWEEIQGLTPSILNPYSKFTLFRNPRFRNSGKFITLPDFLALAKNASTLSGVLIHIEHAAYLAKDQGLSVTDAVFGSLSKAGYDNQTALKVLIQSPDSAVLKKFKQENNSYELVYQVDMSIGDVLNSTVVDIKSFANSVTISKPSVFPENQLFLAGSTDVVKKLQALKLSVYVETFDNEFVSQAWDFFSDATVEINSYVLGANIDGVITSFPKTSARYKKNRCLTMKETPNYMSPVQPGSLLQLVTPDYLPPKTAPSPVLNDKDVAEPPLPPVSARAPAPAVDSGPTAASPTSKPNGQPKLGAGAGFLFLNLAILSIALLPF 799
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 37189681 37199605 + CcPI632755_09g022950.1 Cco09g2295 188752
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco09g2295 799 ProSiteProfiles GP-PDE domain profile. 394 696 IPR030395 GO:0006629(InterPro)|GO:0008081(InterPro)
Cco09g2295 799 MobiDBLite consensus disorder prediction 733 774 - -
Cco09g2295 799 Gene3D Phosphatidylinositol (PI) phosphodiesterase 392 695 IPR017946 GO:0006629(InterPro)|GO:0008081(InterPro)
Cco09g2295 799 Gene3D Phosphatidylinositol (PI) phosphodiesterase 76 374 IPR017946 GO:0006629(InterPro)|GO:0008081(InterPro)
Cco09g2295 799 FunFam Glycerophosphodiester phosphodiesterase GDPDL3 392 696 - -
Cco09g2295 799 SUPERFAMILY PLC-like phosphodiesterases 393 695 IPR017946 GO:0006629(InterPro)|GO:0008081(InterPro)
Cco09g2295 799 CDD GDPD_SHV3_repeat_2 394 695 - -
Cco09g2295 799 Pfam Glycerophosphoryl diester phosphodiesterase family 401 690 IPR030395 GO:0006629(InterPro)|GO:0008081(InterPro)
Cco09g2295 799 Pfam Glycerophosphoryl diester phosphodiesterase family 113 330 IPR030395 GO:0006629(InterPro)|GO:0008081(InterPro)
Cco09g2295 799 ProSiteProfiles GP-PDE domain profile. 78 378 IPR030395 GO:0006629(InterPro)|GO:0008081(InterPro)
Cco09g2295 799 PANTHER GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE 75 760 - GO:0008889(PANTHER)
Cco09g2295 799 FunFam Glycerophosphodiester phosphodiesterase GDPDL3 76 377 - -
Cco09g2295 799 SUPERFAMILY PLC-like phosphodiesterases 77 372 IPR017946 GO:0006629(InterPro)|GO:0008081(InterPro)
Cco09g2295 799 CDD GDPD_SHV3_repeat_1 78 377 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco04g1691 Cco-Chr4:32085929 Cco09g2295 Cco-Chr9:37189681 1.00E-158 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco09g2295 - - - 0.0