Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cco09g2432 ATGCTCTCTTTTTTAGCTGCAATGCTAATAATATCCATTGTTCTGGTCTTGAGGAGCAATAAGAGAAGCAAAAATATACCACCTGGGCAAATGGGTCTTCCTTGGATTGGCGAAACAATGGCTTTTTACAAAGCCCAACGTAAAAACAGAGTATTTGAAGACTTTGTTAGGCCTCGAGTGGCTAAACATGGAAAAATCTTCAAAACAAGCTTAATGGGATCTCCAACAGTGATTGTAAATGGAGCTGAAGCCAATAGATTTTTCTTGTCAAATGAGTTTAAGTTAGTGGTGAGTTCATGGCCATCGGGTTCTGTTCAGTTGATGGGTGAAGAATGCATTATGCAAAAGCAAGGTGAAAGGCACAGAATTGTGCGTGCTCTTATTGCTGCAAGTCTTTCTAGTTCGAGTCTGGAAGTTATGATGCCTAAATTGTGCAATACAATTAAGGTTTATTTGGACACTAAATGGGTTGGTTGTGACACAATTGGTCTATTCCATTCAGCAAAAGTATTGACTTTTACCATAGTGTTTGAGTGTTTGATGGGTATTAAAGTGGAACCACGTGTGTTGATGACATTCGAGAGAGTTTTGGAGGGTGTTTTTGCACCACCGTTCAGGTTTCCAGGCACAAGGTTTTCAAGAGCCAAGAAAGCAAGGTTGGAGATAGAGAAAATGCTAAGGGAAGTGGTGAGAGAGAAGAGGAGGAGAATTGAAGGAAAGTTAGAAGAAGAAGAATGTGGGTCATTGCTTTCAAGGATGGTGAGAGCAATGATGAGAGGGGAGATCAATGAAACGGAAGTCATAGACAATGTGGTTTTGCTTGTTTTTGCAGCTCATGATACAACTTCCTTTGCCATTGCCATGACTTTCAAGATGTTAGCTCAACATTCAAACTGCTACTCACTTCTTCTCCAGGAACACACTGACATAGTGAGAAGCAAGGGGCCAAGCCAGAATTTGACGATGGAAGATATAAAGAAGATGAAATATACTTGGCAAGTAGCTCGTGAGAGCATTAGACTGTTTCCTCCTATATTTGGTTCTTTCAGGAAAGCCATTTCAGACATTGAATATGAGAGATTTTTCATTCCCAAAGGATGGAAGGTATTGTGGACGACGTATGGAACACATTACGAAGAAGAGTACTTTGAAGATCCATTGAGTTTCAAGCCAAGCAGATTTGAGGAACCTGTTTCTCAGTATGTTTATGTTCCATTTGGAGGAGGGCCAAGAGCTTGTGCAGGCTACCAGCTGGCGAAATTGAACATCCTCATCTTTATACATTTGGTTGTAACTCGTTATGATTGGAGTTTAGTCCATCCAGATGAGCCAATCATAATGGATCCTCTCCCTGTCCCTTCTCATGGAATGCCAATTAAGATTTCTCCAAAATCAGAAGTTTGTCCCAATGTTCACCAAATGTAA 1425 40.56 MLSFLAAMLIISIVLVLRSNKRSKNIPPGQMGLPWIGETMAFYKAQRKNRVFEDFVRPRVAKHGKIFKTSLMGSPTVIVNGAEANRFFLSNEFKLVVSSWPSGSVQLMGEECIMQKQGERHRIVRALIAASLSSSSLEVMMPKLCNTIKVYLDTKWVGCDTIGLFHSAKVLTFTIVFECLMGIKVEPRVLMTFERVLEGVFAPPFRFPGTRFSRAKKARLEIEKMLREVVREKRRRIEGKLEEEECGSLLSRMVRAMMRGEINETEVIDNVVLLVFAAHDTTSFAIAMTFKMLAQHSNCYSLLLQEHTDIVRSKGPSQNLTMEDIKKMKYTWQVARESIRLFPPIFGSFRKAISDIEYERFFIPKGWKVLWTTYGTHYEEEYFEDPLSFKPSRFEEPVSQYVYVPFGGGPRACAGYQLAKLNILIFIHLVVTRYDWSLVHPDEPIIMDPLPVPSHGMPIKISPKSEVCPNVHQM 474
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
9 38544503 38546758 + CcPI632755_09g024320.1 Cco09g2432 188889
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cco09g2432 474 SUPERFAMILY Cytochrome P450 20 463 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco09g2432 474 Coils Coil 215 235 - -
Cco09g2432 474 PRINTS E-class P450 group I signature 266 283 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco09g2432 474 PRINTS E-class P450 group I signature 60 79 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco09g2432 474 PRINTS E-class P450 group I signature 372 396 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco09g2432 474 PRINTS E-class P450 group I signature 413 436 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco09g2432 474 PRINTS E-class P450 group I signature 403 413 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco09g2432 474 Gene3D Cytochrome P450 16 464 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco09g2432 474 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 406 415 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Cco09g2432 474 PRINTS P450 superfamily signature 413 424 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco09g2432 474 PRINTS P450 superfamily signature 333 344 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco09g2432 474 PRINTS P450 superfamily signature 277 294 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco09g2432 474 PRINTS P450 superfamily signature 404 413 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco09g2432 474 FunFam Taxadiene 5-alpha hydroxylase 17 464 - -
Cco09g2432 474 PANTHER CYTOCHROME P450 26 25 442 - GO:0004497(PANTHER)|GO:0005783(PANTHER)|GO:0016125(PANTHER)|GO:0016491(PANTHER)|GO:0051777(PANTHER)
Cco09g2432 474 CDD CYP90-like 59 463 - -
Cco09g2432 474 Pfam Cytochrome P450 27 450 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco05g1643 Cco-Chr5:22601435 Cco09g2432 Cco-Chr9:38544503 3.40E-87 dispersed
Cco06g1606 Cco-Chr6:26629366 Cco09g2432 Cco-Chr9:38544503 1.40E-72 dispersed
Cco09g2150 Cco-Chr9:35890580 Cco09g2432 Cco-Chr9:38544503 3.40E-38 dispersed
Cco09g2432 Cco-Chr9:38544503 Cco11g0504 Cco-Chr11:5313500 3.30E-50 dispersed
Cco09g2432 Cco-Chr9:38544503 Cco05g2251 Cco-Chr5:31238407 1.50E-58 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco09g2432 - - - 0.0