Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco09g2466 ATGATGGAATGGAATTGCCAACATTTCGCGGCTTATCCGTTTTCCACCTCCATCGAACAGCTCGCGCCGCCAGCCCCTCCGACCTCCTGCCCGCCGTCGTTATCTCCGGCCATCCCTCGCGCCGCCGCCGGAATTAAAAGCGGGGTTAATCCCTCACCATTCCAAAGAGACTTTCATTCTGCCTTGGCTATGAGGAAGAAACGTAATAACGAGAAACAAAAGGTAATTCTACCGCCGGACCTTCCGCCAGAGGTTACTGAGGAAGAAATTGAGGTCTCCGATGAGGACTTGGAGTTTGTTAAGGAGAATCAAGACTATGCCGTGTCTGTTTCCCGTCTAGACACTAAATCCATAACCAAGCATGTTACCCGGGTCGCTAATGTTGAAGAAGATGCTTTGGAGGTTTTATACGAGAAGCGTCTGCGCAAGAAGCCAGTGGAGAATCAGGAGGAGGAAAATAAGCTCCAAGTTGATCGTGTGGATGCTCTTCCTGTCAAAACACTTGATGGGAAACTCTACTACCGGACATCAAAACTATCCGATGCACCTGAAAATGGTGGGAATGAAGAGGCAACGGAAGAGGACCAGGTAGATAATGGTGTAATGAAGTTAAATAAAGCAGAAAGGAGGGCAAAGCAAAAGAAAAGTAAGAAGATTGCCAAGAAACAAGAGGATGTAACCCAAGCTGAAGAAGTTCAACCAACCCCACAAGCTGCAGTTTTGGCTGAAGTGGCAGAAGATCTTACTGCTGAAAAGACATTTGAAAGTAAGAAGCAGAAACTTGCGGAGCTTGGAATTGCATTGCTGGCAGACCCAAATTCCAATATTAAATCTTTGAAGGAGATGCTGCAGATTGCTAAAGATAATGATCAAGCAATAGTGAAACTTGGACTTCTATCATTGTTGGCTGTTTTTAAAGACATTATACCTGGTTATCGGATTCGGCTTCCAACAGAAAAGGAGCTGGAAATTAAAGTGTCCAAGGATGTCAAGAAAATGCGGTACTATGAGTCTACTCTTCTTACTATTTATAAGGGATACCTGCAGAAGCTGATGTCATTAGAAAAATTGCCGTCATTTCAGCATGTTGTTATTCGCTGTATATGTGCATTGCTTGATGCAGTTCCCCACTTCAACTTTCGAGAGACATTGTTAGGTATCGTTGTTAAAAACATAAGCTCCCCTGATGATGTTGTAAGAAAACTTTGTTGTGGTGCTATTAAGTCTTTATTTATCAATGAGGGAAAGCATGGTGGTGAAGCGACTGTGGAGGCCGTCCGGTTGATTGCTGATCATGTGAAATATCACGATTGCGAATTGCATCCTGATTCCATCCAGTCTTTTTTACATCTAACATTTGACGAGGATCTGAGGAAAGCAGAAAAGCAAGACGAGCATAGTAAAGTAAAGAACAAAAAACACAGGAAAATAAAGAATTGTGAGGAATTAAGTCATTTGCAAGGGAATGATGGAAGACAAAGTATGAGGACGAAGTTTACTGAAGAGGTTGCTGCTGATTACAGGGCTGCTTCTCTTGCTCCAGATGTAATGAAGCAAAGAGAGATGCAGTCAGATACACTTTCTGCTGTGTTTGAAACATATTTCCGAATCTTAAGGCATACAATGCAGTCATTAACTGCTAGGCCTGAAGCAAGTAGTGCTCCGTCCACTATTAGTCCATCTGGATCCCATCCTCTGCTTGCTCCATGTTTGAATGGGTTGGGAAAATTCTCGCATCTCATTGATTTAGATTTCATGGGAGATCTTATGAATTATTTAAAAAGGCTTGCTTCTGGTGGTGACGAATCTTCTGAGAAACAGTCACAATGTTTGACTGTGTCTGAGCGTCTTCAGTGTTGCATTGTGGCATTTAAAGTAATGAGGAAAAACCTTGATGCTTTGAATGTTGATCTTCAGGACTTCTTTGTCCAGCTATACAATATTCTACTTGAGTACAGACCTGGGAGAGATGAAGGTGGATTGTTAGCTGAAGCTTTGAAGATAATGTTGTGCGATGATAGACAGCATGACATGCAAAAGGCAGCTGCATTTATTAAGCGTTTGGCTACTTTCTCATTATGCTTTGGATCTGCAGAGTCGTTGGCAGCCTTGGTCACCGTAAGGCATCTTCTTCAGAAAAATGTCAAGTGCCGCAACCTTTTGGAAAACGATGCTGGTGGAGGTTCGGTATCTGGCTCTATTGCGAAATATCAGCCATATGCCTCTGATCCAAATTTGAGTGGCGCTCTTGCTTCTGTCCTTTGGGAACTTAATCTTCTGTGGAAGCATTATCATCCAGCTGTCTCAACGATGGCTGCTAGCATATCAAGCATGAATAGTGCTCAAAATCAAGTATATATCTCCACTGTTTCTCCCCAACAAGCATTCAAAGACTTGTCGCTTGAACAGGAGTCTTTTAATCCACAATTTAATGCCCGAAAAGTTTACAAGAGGAAAAGAGCTACTGAATCTTCCCAGTCTACTCTGGATACATACGGCACTATCGACGAAAATGAAGTGAAGGAGAAACTCTCAACAAGATTCTTTCTTCTCCGGGACATCAAGGACAATGAAAGGTTGAGGGCTGAATTGGACCGCACCACTTTGACGCGACCGGCCGTCGATATCTCCGATCTCGTCGGATCTCTACAGACGCCGCCGGCTGAATCATCAGGTAACTTCTTGCTTCTACTTCCGATGATAGTGCCGCTGATTAATCAAGAAGAATCCCTAATCCTCCGGCGGATTACCGGAGACTGGATTACCTTCTCCCGTAATTTTAGCGAATTATTACTTCTTTAG 2802 43.29 MMEWNCQHFAAYPFSTSIEQLAPPAPPTSCPPSLSPAIPRAAAGIKSGVNPSPFQRDFHSALAMRKKRNNEKQKVILPPDLPPEVTEEEIEVSDEDLEFVKENQDYAVSVSRLDTKSITKHVTRVANVEEDALEVLYEKRLRKKPVENQEEENKLQVDRVDALPVKTLDGKLYYRTSKLSDAPENGGNEEATEEDQVDNGVMKLNKAERRAKQKKSKKIAKKQEDVTQAEEVQPTPQAAVLAEVAEDLTAEKTFESKKQKLAELGIALLADPNSNIKSLKEMLQIAKDNDQAIVKLGLLSLLAVFKDIIPGYRIRLPTEKELEIKVSKDVKKMRYYESTLLTIYKGYLQKLMSLEKLPSFQHVVIRCICALLDAVPHFNFRETLLGIVVKNISSPDDVVRKLCCGAIKSLFINEGKHGGEATVEAVRLIADHVKYHDCELHPDSIQSFLHLTFDEDLRKAEKQDEHSKVKNKKHRKIKNCEELSHLQGNDGRQSMRTKFTEEVAADYRAASLAPDVMKQREMQSDTLSAVFETYFRILRHTMQSLTARPEASSAPSTISPSGSHPLLAPCLNGLGKFSHLIDLDFMGDLMNYLKRLASGGDESSEKQSQCLTVSERLQCCIVAFKVMRKNLDALNVDLQDFFVQLYNILLEYRPGRDEGGLLAEALKIMLCDDRQHDMQKAAAFIKRLATFSLCFGSAESLAALVTVRHLLQKNVKCRNLLENDAGGGSVSGSIAKYQPYASDPNLSGALASVLWELNLLWKHYHPAVSTMAASISSMNSAQNQVYISTVSPQQAFKDLSLEQESFNPQFNARKVYKRKRATESSQSTLDTYGTIDENEVKEKLSTRFFLLRDIKDNERLRAELDRTTLTRPAVDISDLVGSLQTPPAESSGNFLLLLPMIVPLINQEESLILRRITGDWITFSRNFSELLLL 933
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 38828384 38845953 - CcPI632755_09g024660.1 Cco09g2466 188923
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco09g2466 933 Coils Coil 204 232 - -
Cco09g2466 933 PANTHER NUCLEOLAR COMPLEX PROTEIN 3 63 825 IPR016903 GO:0003682(PANTHER)|GO:0005730(PANTHER)|GO:0006270(PANTHER)
Cco09g2466 933 MobiDBLite consensus disorder prediction 178 234 - -
Cco09g2466 933 Pfam Nucleolar complex-associated protein 257 347 IPR011501 -
Cco09g2466 933 Pfam CBF/Mak21 family 617 772 IPR005612 -
Cco09g2466 933 SUPERFAMILY ARM repeat 278 655 IPR016024 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco09g2466 K14834 - csv:101213821 1409.82