Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco09g2484 ATGTCCAAGTTCTTCTTTGTTTTTGTTGCCCTCTTCCTCCCTGCTCTAGTCTCCGGCGGGCGGCAGTCATGTACATGTGATTCCGATGGCGCTGCCGCCGAGCACAACGCTGCAAAAGAAGCAATCAAATACAAGGTGGGGTCGATTGCGTCTGTGCTTGTGGCCGGCGCTGCAGGGGTGAGCCTCCCTTTGGTGGGCAAGAAGATTCAGTCTCTGAGGCCAGAAAACGACATATTTTTCATGATCAAGGCTTTTGCTGCAGGGGTCATTTTGGGCACTGGGTTCATCCACATACTCCCCGATGCCTTCCAAGACTTGACCTCCCCGTGTATTGCCCAAACCCCTTGGGGCGATTTCCCTTTTGCGGGCTTCATTGCGATGACCGCCTCCATCGCCACCTTGATGTTGGACACATTTGCAACCAGTTTTTACCAGAGACGCCACTTCAGTAAAACCAAGCAGGTAACTACAGATCAGGAAAGAGGCGACGACCATGCCGGTCACGTGCATGTTCACACGCACGCCACACATGGCCACGCTCACGGATCCGCCGCCGCTCCCACCGGAGACTTGAGTCTCGCTGACTTGATCCGCTACCGGATTATATCTCAGGTGTTGGAGTTGGGAATTGTGGTTCATTCGGTAATAATTGGTATTTCTCTTGGTGCCTCACAGAACCCTGCCACGATTAAGCCACTACTTGTTGCTCTGTCTTTTCACCAATTTTTCGAGGGCATGGGTCTCGGTGGCTGCATTTCCCAGGCACAATTTAGGTGGCGATCAGCGGCAGCAATGGCGACATTTTTCTCACTGACAGCACCTGTGGGAATTGGAGTGGGAATTGGAATCTCCGGAGTTTACAAAGACAACAGCCGGACGGCTCTGATCGTGGAAGGAAGCATGAACTCAGCATCGGCAGGAATATTGATATACATGGCGCTTGTTGACCTTCTTGCAGCAGATTTCATGAACCCAAGGATGCAAAACAATTTGGGGCTTCAATTAGGGGCTAACATCTCTTTGCTTCTAGGAGCTGCTTGCATGTCTGTATTGGCCAAATGGGCTTGA 1068 51.59 MSKFFFVFVALFLPALVSGGRQSCTCDSDGAAAEHNAAKEAIKYKVGSIASVLVAGAAGVSLPLVGKKIQSLRPENDIFFMIKAFAAGVILGTGFIHILPDAFQDLTSPCIAQTPWGDFPFAGFIAMTASIATLMLDTFATSFYQRRHFSKTKQVTTDQERGDDHAGHVHVHTHATHGHAHGSAAAPTGDLSLADLIRYRIISQVLELGIVVHSVIIGISLGASQNPATIKPLLVALSFHQFFEGMGLGGCISQAQFRWRSAAAMATFFSLTAPVGIGVGIGISGVYKDNSRTALIVEGSMNSASAGILIYMALVDLLAADFMNPRMQNNLGLQLGANISLLLGAACMSVLAKWA 355
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 38974381 38976658 + CcPI632755_09g024840.1 Cco09g2484 188941
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco09g2484 355 PANTHER ZINC/IRON TRANSPORTER 41 354 - GO:0005385(PANTHER)|GO:0005886(PANTHER)|GO:0016020(PANTHER)|GO:0071577(PANTHER)
Cco09g2484 355 Pfam ZIP Zinc transporter 43 352 IPR003689 GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro)|GO:0055085(InterPro)
Cco09g2484 355 NCBIfam ZIP zinc/iron transport family 26 355 IPR004698 GO:0005385(InterPro)|GO:0016020(InterPro)|GO:0071577(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco09g2484 Cco-Chr9:38974381 Cco11g1732 Cco-Chr11:30172907 1.20E-97 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco09g2484 K14709 - csv:101216720 540.421