Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco10g0012 ATGTCTGTTTTTTGTCTCTGCTTCTGCCTTCTGTTTGGTGGTAGCGCCGCCGCGGGCGGTGGAGACGGCGGCGGCGGTCACTCCAGGGAGCTCGATAACACACCCACCTGGGCAGTTGCTGGTGTTTGTTTCTTTTTCATTGTTATTTCCATTGTGTTGGAAAAAGTTCTTCACAAAGTTGGAACGTGGTTGACAGAAAAGCACAAGAGTTCTCTGTATGAAGCTCTAGAGAAGGTTAAGGCTGAATTGATGATTTTGGGATTCATTTCCCTGCTTCTGACTTTTGCACAAGCATATATAGTCCAAATTTGTATTCCTCCAGCCATTGCAAACTCCATGTTGCCTTGTCACCTTGAAGAGAAAGATGGCTCATCATCTGCAGCCAGTGAAGACGAACATCACCGGAGACTACAATGGCTAATTCGAAGATCATTGGCTGGAGGCCACAATGTCGTCTCGTGTAAGGATGGTAATGTGTCTCTTATATCTATTGATGGATTGCATCAGTTACACATTCTCATTTTCTTCTTAGCTGTGTTTCATGTGCTCTTTAGTGTTATCACAATGACACTTGGAAGGGTAAAGATTCGAGGTTGGAAGGAGTGGGAGCAGGAAACTTCAACCCATATCTATGAGTTTTTCAACGATCCTGCAAGATTTAGGCTTACTCATGAGACATCTTTTGTGAAAGCACACACCAGCTTTTGGACACGTCTTCCTTTCTTCTTCTATATTGGCTGCTTTTTCAGGCAATTTTATGGGTCTGTTAGTAAGGCTGATTACTTGACACTACGCAATGGATTCATAACAGTTCATTTAGCACCTGGAAGTAAATTTAACTTCCAGAGATATATCAAAAGGTCATTAGAAGACGACTTCAAGGTAGTCGTCGGTGTGAGTCCTGTTCTGTGGTTGTCATTTGTGATCTTCCTGCTCCTTAATCTAGCTGGATGGCATACGTTATTTTGGGCATCATTTATCCCTTTGATTATAATCTTAGCCGTTGGATCAAAACTTCAAGCCATTTTGACTAGAATGGCTCTTGAAATCTCTGAGAAACATGCAGTGGTCCAGGGAATTCCACTCGTGCAAGGATCTGATAAATATTTCTGGTTCGGTCGACCTCAACTGATTCTTCATCTCATGCATTTTGCTTTATTTCAGAATGCGTTCCAGACCACCTATATTTTGTCTACACTGTATTCTTTTGGCCCGAATTCTTGCTTCTCCGATGGTCGCATCCTTACAATTATAAAAGTTGGTTTAGGGGTAGCAGCATTATTCCTTTGCAGCTATGTTACGCTTCCGATATATGCCCTTGTAACTCAGATGGGTTCGGGTATGAAGAGGTCCATCTTTGATGAACAGACATCAAAGGCACTCAAGAAATGGCATGAAACAGCCAAGAAGAAGAAGCGGGTTCAACGAGCCTCAGCGACTAAAACACTTGGAGGTAGTTCAAATGCTTCACCTCTACGCTCCTTTGGACGCTCATTGCGACGGTTTAAAACTACGGGACACTCCATACGTGTGCCTGCGTATGAGGACCTCGAGTCGTCTGATTATGAGGGCGATCCATTAGCAACACTTGCACAAGTATCAACAACGGAATCGATTAATGTTGATGTAGATGGAGATGAAATACGTGAAATTGCTGAAAAAGACCAACCCCACAATACAAAGCAAGAAGAAGGAGATGAGTTCTCATTTATAAAGCCTGCAGCACCACTGAAATAA 1737 42.95 MSVFCLCFCLLFGGSAAAGGGDGGGGHSRELDNTPTWAVAGVCFFFIVISIVLEKVLHKVGTWLTEKHKSSLYEALEKVKAELMILGFISLLLTFAQAYIVQICIPPAIANSMLPCHLEEKDGSSSAASEDEHHRRLQWLIRRSLAGGHNVVSCKDGNVSLISIDGLHQLHILIFFLAVFHVLFSVITMTLGRVKIRGWKEWEQETSTHIYEFFNDPARFRLTHETSFVKAHTSFWTRLPFFFYIGCFFRQFYGSVSKADYLTLRNGFITVHLAPGSKFNFQRYIKRSLEDDFKVVVGVSPVLWLSFVIFLLLNLAGWHTLFWASFIPLIIILAVGSKLQAILTRMALEISEKHAVVQGIPLVQGSDKYFWFGRPQLILHLMHFALFQNAFQTTYILSTLYSFGPNSCFSDGRILTIIKVGLGVAALFLCSYVTLPIYALVTQMGSGMKRSIFDEQTSKALKKWHETAKKKKRVQRASATKTLGGSSNASPLRSFGRSLRRFKTTGHSIRVPAYEDLESSDYEGDPLATLAQVSTTESINVDVDGDEIREIAEKDQPHNTKQEEGDEFSFIKPAAPLK 578
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 197771 202142 - CcPI632755_10g000120.1 Cco10g0012 188970
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco10g0012 578 MobiDBLite consensus disorder prediction 472 492 - -
Cco10g0012 578 MobiDBLite consensus disorder prediction 552 568 - -
Cco10g0012 578 MobiDBLite consensus disorder prediction 552 578 - -
Cco10g0012 578 PANTHER MLO-LIKE PROTEIN 1 23 491 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
Cco10g0012 578 Pfam Mlo family 29 493 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco05g2351 Cco-Chr5:32027397 Cco10g0012 Cco-Chr10:197771 8.20E-128 dispersed
Cco06g0054 Cco-Chr6:519452 Cco10g0012 Cco-Chr10:197771 4.80E-95 dispersed
Cco08g1081 Cco-Chr8:22604995 Cco10g0012 Cco-Chr10:197771 2.70E-146 dispersed
Cco09g2082 Cco-Chr9:35230327 Cco10g0012 Cco-Chr10:197771 1.80E-84 dispersed
Cco10g0012 Cco-Chr10:197771 Cco11g1866 Cco-Chr11:31332921 2.10E-83 dispersed
Cco10g0012 Cco-Chr10:197771 Cco04g1876 Cco-Chr4:33377143 4.90E-197 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco10g0012 K08472 - csv:116402632 1000.35