Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco10g0012 ATGTCTGTTTTTTGTCTCTGCTTCTGCCTTCTGTTTGGTGGTAGCGCCGCCGCGGGCGGTGGAGACGGCGGCGGCGGTCACTCCAGGGAGCTCGATAACACACCCACCTGGGCAGTTGCTGGTGTTTGTTTCTTTTTCATTGTTATTTCCATTGTGTTGGAAAAAGTTCTTCACAAAGTTGGAACGTGGTTGACAGAAAAGCACAAGAGTTCTCTGTATGAAGCTCTAGAGAAGGTTAAGGCTGAATTGATGATTTTGGGATTCATTTCCCTGCTTCTGACTTTTGCACAAGCATATATAGTCCAAATTTGTATTCCTCCAGCCATTGCAAACTCCATGTTGCCTTGTCACCTTGAAGAGAAAGATGGCTCATCATCTGCAGCCAGTGAAGACGAACATCACCGGAGACTACAATGGCTAATTCGAAGATCATTGGCTGGAGGCCACAATGTCGTCTCGTGTAAGGATGGTAATGTGTCTCTTATATCTATTGATGGATTGCATCAGTTACACATTCTCATTTTCTTCTTAGCTGTGTTTCATGTGCTCTTTAGTGTTATCACAATGACACTTGGAAGGGTAAAGATTCGAGGTTGGAAGGAGTGGGAGCAGGAAACTTCAACCCATATCTATGAGTTTTTCAACGATCCTGCAAGATTTAGGCTTACTCATGAGACATCTTTTGTGAAAGCACACACCAGCTTTTGGACACGTCTTCCTTTCTTCTTCTATATTGGCTGCTTTTTCAGGCAATTTTATGGGTCTGTTAGTAAGGCTGATTACTTGACACTACGCAATGGATTCATAACAGTTCATTTAGCACCTGGAAGTAAATTTAACTTCCAGAGATATATCAAAAGGTCATTAGAAGACGACTTCAAGGTAGTCGTCGGTGTGAGTCCTGTTCTGTGGTTGTCATTTGTGATCTTCCTGCTCCTTAATCTAGCTGGATGGCATACGTTATTTTGGGCATCATTTATCCCTTTGATTATAATCTTAGCCGTTGGATCAAAACTTCAAGCCATTTTGACTAGAATGGCTCTTGAAATCTCTGAGAAACATGCAGTGGTCCAGGGAATTCCACTCGTGCAAGGATCTGATAAATATTTCTGGTTCGGTCGACCTCAACTGATTCTTCATCTCATGCATTTTGCTTTATTTCAGAATGCGTTCCAGACCACCTATATTTTGTCTACACTGTATTCTTTTGGCCCGAATTCTTGCTTCTCCGATGGTCGCATCCTTACAATTATAAAAGTTGGTTTAGGGGTAGCAGCATTATTCCTTTGCAGCTATGTTACGCTTCCGATATATGCCCTTGTAACTCAGATGGGTTCGGGTATGAAGAGGTCCATCTTTGATGAACAGACATCAAAGGCACTCAAGAAATGGCATGAAACAGCCAAGAAGAAGAAGCGGGTTCAACGAGCCTCAGCGACTAAAACACTTGGAGGTAGTTCAAATGCTTCACCTCTACGCTCCTTTGGACGCTCATTGCGACGGTTTAAAACTACGGGACACTCCATACGTGTGCCTGCGTATGAGGACCTCGAGTCGTCTGATTATGAGGGCGATCCATTAGCAACACTTGCACAAGTATCAACAACGGAATCGATTAATGTTGATGTAGATGGAGATGAAATACGTGAAATTGCTGAAAAAGACCAACCCCACAATACAAAGCAAGAAGAAGGAGATGAGTTCTCATTTATAAAGCCTGCAGCACCACTGAAATAA 1737 42.95 MSVFCLCFCLLFGGSAAAGGGDGGGGHSRELDNTPTWAVAGVCFFFIVISIVLEKVLHKVGTWLTEKHKSSLYEALEKVKAELMILGFISLLLTFAQAYIVQICIPPAIANSMLPCHLEEKDGSSSAASEDEHHRRLQWLIRRSLAGGHNVVSCKDGNVSLISIDGLHQLHILIFFLAVFHVLFSVITMTLGRVKIRGWKEWEQETSTHIYEFFNDPARFRLTHETSFVKAHTSFWTRLPFFFYIGCFFRQFYGSVSKADYLTLRNGFITVHLAPGSKFNFQRYIKRSLEDDFKVVVGVSPVLWLSFVIFLLLNLAGWHTLFWASFIPLIIILAVGSKLQAILTRMALEISEKHAVVQGIPLVQGSDKYFWFGRPQLILHLMHFALFQNAFQTTYILSTLYSFGPNSCFSDGRILTIIKVGLGVAALFLCSYVTLPIYALVTQMGSGMKRSIFDEQTSKALKKWHETAKKKKRVQRASATKTLGGSSNASPLRSFGRSLRRFKTTGHSIRVPAYEDLESSDYEGDPLATLAQVSTTESINVDVDGDEIREIAEKDQPHNTKQEEGDEFSFIKPAAPLK 578
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 197771 202142 - CcPI632755_10g000120.1 Cco10g0012 188970

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cco10g0012 578 MobiDBLite consensus disorder prediction 472 492 - -
Cco10g0012 578 MobiDBLite consensus disorder prediction 552 568 - -
Cco10g0012 578 MobiDBLite consensus disorder prediction 552 578 - -
Cco10g0012 578 PANTHER MLO-LIKE PROTEIN 1 23 491 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
Cco10g0012 578 Pfam Mlo family 29 493 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco10g0012 K08472 - - csv:116402632 1000.35
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco05g2351 Cco-Chr5:32027397 Cco10g0012 Cco-Chr10:197771 8.20E-128 dispersed
Cco06g0054 Cco-Chr6:519452 Cco10g0012 Cco-Chr10:197771 4.80E-95 dispersed
Cco08g1081 Cco-Chr8:22604995 Cco10g0012 Cco-Chr10:197771 2.70E-146 dispersed
Cco09g2082 Cco-Chr9:35230327 Cco10g0012 Cco-Chr10:197771 1.80E-84 dispersed
Cco10g0012 Cco-Chr10:197771 Cco11g1866 Cco-Chr11:31332921 2.10E-83 dispersed
Cco10g0012 Cco-Chr10:197771 Cco04g1876 Cco-Chr4:33377143 4.90E-197 wgd
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Cco09g2082 . 3 553 MLO family AT5G53760 69.6 3.8e-218 754.6
Cco11g1866 . 5 530 MLO family AT5G53760 67.4 4.0e-207 718.0
Cco05g1118 . 7 466 MLO family AT5G53760 51.3 3.1e-127 452.6
Cco09g2082 . 3 553 MLO family AT1G26700 68.3 1.8e-212 735.7
Cco11g1866 . 1 511 MLO family AT1G26700 66.7 4.1e-201 698.0
Cco03g0237 . 8 536 MLO family AT2G39200 63.9 2.1e-192 669.1
Cco05g2351 . 7 499 MLO family AT2G39200 67.7 1.4e-191 666.4
Cco02g2253 . 8 505 MLO family AT2G39200 67.1 1.5e-190 662.9
Cco02g2253 . 1 416 MLO family AT1G61560 65.9 7.7e-160 560.5
Cco03g0237 . 1 416 MLO family AT1G61560 66.3 4.7e-157 551.2
Cco05g2351 . 7 408 MLO family AT1G61560 65.2 1.6e-152 536.2
Cco04g1876 . 28 422 MLO family AT1G61560 52.2 2.0e-115 412.9
Cco04g1876 . 18 490 MLO family AT2G17430 63.4 1.8e-172 602.8
Cco10g0012 . 29 490 MLO family AT2G17430 63.4 1.6e-160 563.1
Cco08g1081 . 4 451 MLO family AT2G17430 54.4 3.1e-132 469.2
Cco04g1876 . 7 567 MLO family AT2G17480 63.4 1.1e-196 683.3
Cco10g0012 . 5 574 MLO family AT2G17480 58.6 4.5e-177 618.2
Cco08g1081 . 11 436 MLO family AT2G17480 59.5 4.7e-142 501.9
Cco02g2253 . 8 463 MLO family AT2G17480 50.3 3.3e-124 442.6
Cco08g1081 . 1 366 MLO family AT1G42560 59.6 8.7e-126 447.2
Cco04g1876 . 28 386 MLO family AT1G42560 58.7 1.4e-120 429.9
Cco10g0012 . 29 388 MLO family AT1G42560 56.5 2.1e-111 399.4
Cco06g0054 . 6 419 MLO family AT4G24250 54.2 6.0e-117 417.9
Cco02g0029 . 43 329 MLO family AT4G24250 51.8 3.8e-79 292.4
Cco04g1876 . 8 387 MLO family AT5G65970 66.8 8.1e-145 510.8
Cco10g0012 . 28 388 MLO family AT5G65970 66.2 4.0e-136 481.9
Cco08g1081 . 7 364 MLO family AT5G65970 56.9 2.5e-114 409.5
Cco02g2253 . 2 381 MLO family AT5G65970 51.8 7.4e-106 381.3
Cco03g0237 . 2 381 MLO family AT5G65970 50.7 1.4e-101 367.1
Cco08g1081 . 2 513 MLO family AT2G33670 57.6 1.2e-159 560.1
Cco04g1876 . 28 470 MLO family AT2G33670 62.3 6.7e-158 554.3
Cco10g0012 . 29 471 MLO family AT2G33670 58.7 9.7e-141 497.3
Cco05g2351 . 64 525 MLO family AT1G11310 63.9 1.7e-169 592.8
Cco03g0237 . 63 506 MLO family AT1G11310 64.9 7.5e-165 577.4
Cco02g2253 . 63 520 MLO family AT1G11310 62.7 9.2e-163 570.5
Cco06g0054 . 5 501 MLO family AT2G44110 59.5 1.9e-165 579.3
Cco06g0054 . 1 508 MLO family AT4G02600 72.7 2.6e-213 738.4
Cco05g1118 . 3 560 MLO family AT1G11000 67.3 9.8e-214 740.0
Cco10g0068 . 1 495 MLO family AT1G11000 51.5 1.0e-130 464.2
Cco06g0054 . 1 508 MLO family AT4G02600 72.7 2.6e-213 738.4
Cco05g2351 . 64 525 MLO family AT1G11310 63.9 1.7e-169 592.8
Cco03g0237 . 63 506 MLO family AT1G11310 64.9 7.5e-165 577.4
Cco02g2253 . 63 520 MLO family AT1G11310 62.7 9.2e-163 570.5
Cco05g1118 . 3 560 MLO family AT1G11000 67.3 9.8e-214 740.0
Cco10g0068 . 1 495 MLO family AT1G11000 51.5 1.0e-130 464.2
Cco08g1081 . 2 513 MLO family AT2G33670 57.6 1.2e-159 560.1
Cco04g1876 . 28 470 MLO family AT2G33670 62.3 6.7e-158 554.3
Cco10g0012 . 29 471 MLO family AT2G33670 58.7 9.7e-141 497.3
Cco02g2253 . 1 416 MLO family AT1G61560 65.9 7.7e-160 560.5
Cco03g0237 . 1 416 MLO family AT1G61560 66.3 4.7e-157 551.2
Cco05g2351 . 7 408 MLO family AT1G61560 65.2 1.6e-152 536.2
Cco04g1876 . 28 422 MLO family AT1G61560 52.2 2.0e-115 412.9
Cco04g1876 . 18 490 MLO family AT2G17430 63.4 1.8e-172 602.8
Cco10g0012 . 29 490 MLO family AT2G17430 63.4 1.6e-160 563.1
Cco08g1081 . 4 451 MLO family AT2G17430 54.4 3.1e-132 469.2
Cco04g1876 . 7 567 MLO family AT2G17480 63.4 1.1e-196 683.3
Cco10g0012 . 5 574 MLO family AT2G17480 58.6 4.5e-177 618.2
Cco08g1081 . 11 436 MLO family AT2G17480 59.5 4.7e-142 501.9
Cco02g2253 . 8 463 MLO family AT2G17480 50.3 3.3e-124 442.6
Cco08g1081 . 1 366 MLO family AT1G42560 59.6 8.7e-126 447.2
Cco04g1876 . 28 386 MLO family AT1G42560 58.7 1.4e-120 429.9
Cco10g0012 . 29 388 MLO family AT1G42560 56.5 2.1e-111 399.4
Cco04g1876 . 8 387 MLO family AT5G65970 66.8 8.1e-145 510.8
Cco10g0012 . 28 388 MLO family AT5G65970 66.2 4.0e-136 481.9
Cco08g1081 . 7 364 MLO family AT5G65970 56.9 2.5e-114 409.5
Cco02g2253 . 2 381 MLO family AT5G65970 51.8 7.4e-106 381.3
Cco03g0237 . 2 381 MLO family AT5G65970 50.7 1.4e-101 367.1
Cco09g2082 . 3 553 MLO family AT5G53760 69.6 3.8e-218 754.6
Cco11g1866 . 5 530 MLO family AT5G53760 67.4 4.0e-207 718.0
Cco05g1118 . 7 466 MLO family AT5G53760 51.3 3.1e-127 452.6
Cco03g0237 . 8 536 MLO family AT2G39200 63.9 2.1e-192 669.1
Cco05g2351 . 7 499 MLO family AT2G39200 67.7 1.4e-191 666.4
Cco02g2253 . 8 505 MLO family AT2G39200 67.1 1.5e-190 662.9
Cco06g0054 . 6 419 MLO family AT4G24250 54.2 6.0e-117 417.9
Cco02g0029 . 43 329 MLO family AT4G24250 51.8 3.8e-79 292.4
Cco09g2082 . 3 553 MLO family AT1G26700 68.3 1.8e-212 735.7
Cco11g1866 . 1 511 MLO family AT1G26700 66.7 4.1e-201 698.0
Cco06g0054 . 5 501 MLO family AT2G44110 59.5 1.9e-165 579.3
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000765 3 4 3 4 2 3 4 3 3 3 2 3 4 3 3 4 2 3 4 3 3 3 3 3 3 3 2 6 2 2 93