Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco10g0068 ATGGGAGAAGAGGGACGATCCTTGGCCGTTACCCCCACTTGGGCTTTCGCCACAGTGGTTACTCTCATGGTTTCTCTTGGATTCTTCTTCCAAGGCACGTTGAAACGGACCAAAAAGTGGTTGAATAGGACGAAGAGAAAATCGTTACTCGCCGCGTTGGATAAGATTAAAGAAGAGCTGATGCTCTTTGGACTTCTTTCGTTGTTGATGGGTCACTGGATTGTTTTTGTTGCAAGAATTTGTGTTAAGTCATCTGTCTTGAGCAGCCGTTTCTATCCTTGTGCGTTGGAGATTGATCTGAAACGAGTTAGACATATTTCTATTGCAAGTGAAAACTTGAACAGTTCTGTTCCAAGGGAGCATAATAACGATGGGATACGAGAGTATTGTCCTGAGGGTCGTGAATCATTTGCTTCATATGAAAGTTTAGAGCAGCTTCATCGATTAATTTTCGTTCTTGGTGTCACCCATGTTTCATATAGCTTCATTGCTATTGCCCTGGCTATGATTAAGATATATGGGTGGAGAGCGTGGGAAAATGAGGCTAAGGCCTTGGCCATTCAGAATGCTCAAGAAGAATCTGTACAAGCATCATCAACTGGACCAAACATAAGGCGACTATCAACTTTTGTCTTTCACCATACTTCTCATCCATGGAGTCAGCATAGAGTCCTTGTTTGGCTGCTCTGTTTCAGCCGCCAGTTTTGGAGTTCTATCAATCGAGCTGATTACATGGCTTTGCGGTTGGGATTTATCAGTACTCATGAACTTCCTATATCATATGACTTCCATAATTATATGCTTCGAAGCATGGATGATGAATTTCGCGATATGGTTGGTATAAGCGTGCCACTCTGGATATATGCCATTGCTTGCATCTTCCTCAACTTTCATGGAAGCAACATTTACTTTTGGCTTTCCTTTCTCCCTGCAATTTTGATTCTGCTAATCGGGACAAAACTGCACCGGGTAGTTGTAAAGTTGGCTGTAGAAGTTGTCGATACATCTCGAAGGGGATATTACCGTTTTAACTTGAGGGACGAACTGTTTTGGTTTGGGAAGCCTAAGCTTCTTTTGTGGTCGATACAATTTATATCCTTCCAGAATGCTTTTGAGATGGCTACATTTATTTGGTCCCTGTGGGAAATTAAGGAACCTTCTTGTTTCATGGACAACGTAACATACGTAGGTATCCGCTTGGCCTTTGGGGTTATCACTCAGTTTTGGTGTAGCTTCATTACATTCCCACTCTATGTTATAGTAACTCAGATGGGGTCGAAGGTCAAGAAATCACTAGTGTCGGAGAATGTCCGAAACTCGCTTCATCAATGGAAAAGAAGAGTGAAGGCAAGGCCGGGTGTTTCTTCCTCAGTTGCACTTGTGGGTGCAACATCACTTTCATCCTCCGTTTGTACAATGGATGATGATGGTCGGATAATCGACGACTTTACTGTGAACTGCTTGGAAGGAAGCACATCGAACACCGCCCAATACACACATTTCTCCCAGGTACTTCAGCAAGCTTCGTCGGACGACATGGACGTACAAATATCTGTTAGTTCTAGTCCTCCTCACATTACTTCCAACAACAAGGGTGAAGGCAATGAGGATCATTGA 1617 43.17 MGEEGRSLAVTPTWAFATVVTLMVSLGFFFQGTLKRTKKWLNRTKRKSLLAALDKIKEELMLFGLLSLLMGHWIVFVARICVKSSVLSSRFYPCALEIDLKRVRHISIASENLNSSVPREHNNDGIREYCPEGRESFASYESLEQLHRLIFVLGVTHVSYSFIAIALAMIKIYGWRAWENEAKALAIQNAQEESVQASSTGPNIRRLSTFVFHHTSHPWSQHRVLVWLLCFSRQFWSSINRADYMALRLGFISTHELPISYDFHNYMLRSMDDEFRDMVGISVPLWIYAIACIFLNFHGSNIYFWLSFLPAILILLIGTKLHRVVVKLAVEVVDTSRRGYYRFNLRDELFWFGKPKLLLWSIQFISFQNAFEMATFIWSLWEIKEPSCFMDNVTYVGIRLAFGVITQFWCSFITFPLYVIVTQMGSKVKKSLVSENVRNSLHQWKRRVKARPGVSSSVALVGATSLSSSVCTMDDDGRIIDDFTVNCLEGSTSNTAQYTHFSQVLQQASSDDMDVQISVSSSPPHITSNNKGEGNEDH 538
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 672511 677130 - CcPI632755_10g000680.1 Cco10g0068 189026
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco10g0068 538 PANTHER MLO-LIKE PROTEIN 1 2 499 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
Cco10g0068 538 Pfam Mlo family 5 457 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
Cco10g0068 538 MobiDBLite consensus disorder prediction 512 538 - -
Cco10g0068 538 MobiDBLite consensus disorder prediction 512 530 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco05g1118 Cco-Chr5:10163969 Cco10g0068 Cco-Chr10:672511 3.50E-139 dispersed
Cco10g0068 Cco-Chr10:672511 Cco11g1866 Cco-Chr11:31332921 1.70E-103 dispersed
Cco10g0068 Cco-Chr10:672511 Cco09g2082 Cco-Chr9:35230327 2.20E-106 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco10g0068 K08472 - csv:101217051 984.941