Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cco10g0091 | ATGGGCAGGATGGGAGGAAGGCAAAGGACTTACACCGCTAATTCCAGTGATTATAAGCTTCTTGAAGAGATTGGTTATGGTGCTAGTGCTACTGTTTTTAGAGCGATCTATACTCCGTCAAATGAAGTCGTCGCCATCAAGTGTTTGGATCTTGATCGCTGCAATAGTAATCTTGATGATATACGTAGGGAGGCTCAAACAATGAGTTTGATAGATCATCCAAACCTTGTAAGGGCTTATTGTTCATTTGTTGTTGAACGAAACCTTTGGGTTGTCATGCCATTCATGGCAGAGGGTTCTTGTTTGCACCTAATGAAGACAGCGTACTCAGATGGCTTTGAAGAGGTTGCTATTGGTTCTATCTTGAAAGAGACTCTTAAAGCTTTGGAGTACCTTCATCGCCAAGGGCACATACATCGGGATGTCAAGGCTGGAAATATACTACTTGATAGTAATGGGTCTGTGAAGCTTGCTGATTTTGGTGTTTCAGCGTGCATGTTTGATACAGGTGACAGACAGCGCTCCAGAAATACCTTTGTGGGAACCCCATGCTGGATGGCACCGGAGGTATTGCAACCAGGAACTGGATATAATTCCAAGGCTGATATTTGGTCCTTTGGTATTACAGCTTTGGAGTTGGCTCATGGTCATGCACCATTTTCAAAATATCCTCCAATGAAGGTGCTTCTTATGACCATACAAAATGCTCCTCCTGGGCTGGATTATGATAGAGATAAACGGTTCTCTAAGTCTTTTAAAGAAATGGTTGCAATGTGCCTGGTGAAAGATCAAACCAAGAGGCCAACAGCTGAGAAACTTTTAAAGCACTCCTTTTTCAAGAATGCTAAGCCTCCAGAGGTTTCTTTGAAGAAACTATTTGCTAACTTGCCTCCTCTTTCACATCGTGTAAAGGAGCTGCAGCTTAAGGATGCTGCCCAGCTAGCCTTAAAGAAAATGCCTTCAGCAGAGCAAGAAGCATTATCACAGAGTGAGTACCAGCGAGGAGTTAGTGCATGGAACTTTGATGTCGAGGATTTGAAAGCCCAAGCTTCCCTGGTGAATGATGATATGGCAGAGATGAAGGAAGAGGAGGAGAGTATAAATTCTTGTAGTGTTAAGGATGCCTTCTGTCCTCAAGCTAGTATGAAGAATTTCAATTCATGTAATGAATCATATCAGGATGAGCATGGAGTAGGGGCAAGTGGTCAGGGATTGTCACAAGTAGAGTGCTTGAGCAAAAAGGGAAACTTTATGGAAAGTGATATGCTGAAAGCTGGGTTGCAAGAAAAAACTGGATGGAAGAGAAATGGAACTAGCAATGAAGCAGAAGCATCTACCTCTGGCCAAGACATTGTACAAGGCAAGACCAAAACCCAACTGCCAAAAGGTCGTCAAACTCAAAGTGGTCCACTTCTACCTGGCACTGTGCTCAGTCATTCTTTATCAGAAAGAGTGCGAGGCTCTGAGAGGTTTGATTCTGAAATTCAACCATCTGCTGAAAAAAATCGTCGAGAAGCACGGCAAGCTCCAAGCTTCAGTGGTCCACTAATGCTGCCAAACCGCGCCTCTGCAAACAGCCTATCAGCTCCAATAAAACCTTCTGGAGGGTTTAGAGATTCAATGGATGACAAATCCAAAGCTAATCTTGTGCAAATTAAGGGACGTTTTTCAGTGACGTCAGAGAACCTAGATCTCGTAAAGGATATTCCATTGAGCACAGTTTCACGTCGGTCTTCACAGAACTCTCCTCTACGAAAGTCAGCTAGTGTTGGTGATTGGATATTCGATTCCAAGCAGTCTGTCAGCCAACAACCCCCTAAGGAGGCTTGCAACGTCAACGTGCCTACATCAATTCTTTTGCCTCATCTTCAGAATCTTTTCCATCAGACCTCAATTCAGCAGGATCTTATAGTGAACTTGTTGAATAGCTTACAAGCAGCAGACGTGGTTGATGCTTCTCAAAACGGAAAGTTGCCTCCATTGCCCCGAAGCTCGGAGAATAATGGAAGTGCTGAAACAGCTGCAGTTGATAGAGAGCGTTTACTGCTTCGGAAAGTCTCTGAACTCCAAGCTAGAATGACGCATTTGACTTATGAATTGACCGCTGAAAAGTTGAAATACATTCAATTACAAGAGCAGTTCAACTCGGCATCTGGTCAGGAAGAAAACGAGATCAAGAGGGAAGAAAATGTATGA | 2196 | 43.53 | MGRMGGRQRTYTANSSDYKLLEEIGYGASATVFRAIYTPSNEVVAIKCLDLDRCNSNLDDIRREAQTMSLIDHPNLVRAYCSFVVERNLWVVMPFMAEGSCLHLMKTAYSDGFEEVAIGSILKETLKALEYLHRQGHIHRDVKAGNILLDSNGSVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVLQPGTGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDKRFSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFFKNAKPPEVSLKKLFANLPPLSHRVKELQLKDAAQLALKKMPSAEQEALSQSEYQRGVSAWNFDVEDLKAQASLVNDDMAEMKEEEESINSCSVKDAFCPQASMKNFNSCNESYQDEHGVGASGQGLSQVECLSKKGNFMESDMLKAGLQEKTGWKRNGTSNEAEASTSGQDIVQGKTKTQLPKGRQTQSGPLLPGTVLSHSLSERVRGSERFDSEIQPSAEKNRREARQAPSFSGPLMLPNRASANSLSAPIKPSGGFRDSMDDKSKANLVQIKGRFSVTSENLDLVKDIPLSTVSRRSSQNSPLRKSASVGDWIFDSKQSVSQQPPKEACNVNVPTSILLPHLQNLFHQTSIQQDLIVNLLNSLQAADVVDASQNGKLPPLPRSSENNGSAETAAVDRERLLLRKVSELQARMTHLTYELTAEKLKYIQLQEQFNSASGQEENEIKREENV | 731 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 843819 | 854485 | + | CcPI632755_10g000910.1 | Cco10g0091 | 189049 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cco10g0091 | 731 | PANTHER | SERINE/THREONINE-PROTEIN KINASE FRAY2 | 9 | 710 | IPR047173 | GO:0043539(InterPro) | |
Cco10g0091 | 731 | ProSiteProfiles | Protein kinase domain profile. | 18 | 279 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cco10g0091 | 731 | FunFam | Serine/threonine-protein kinase BLUS1 | 7 | 95 | - | - | |
Cco10g0091 | 731 | FunFam | serine/threonine-protein kinase BLUS1-like isoform X2 | 99 | 329 | - | - | |
Cco10g0091 | 731 | MobiDBLite | consensus disorder prediction | 428 | 519 | - | - | |
Cco10g0091 | 731 | ProSitePatterns | Protein kinases ATP-binding region signature. | 24 | 47 | IPR017441 | GO:0005524(InterPro) | |
Cco10g0091 | 731 | Gene3D | Phosphorylase Kinase; domain 1 | 7 | 95 | - | - | |
Cco10g0091 | 731 | Pfam | Protein kinase domain | 18 | 279 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cco10g0091 | 731 | MobiDBLite | consensus disorder prediction | 432 | 475 | - | - | |
Cco10g0091 | 731 | MobiDBLite | consensus disorder prediction | 658 | 672 | - | - | |
Cco10g0091 | 731 | Gene3D | Transferase(Phosphotransferase) domain 1 | 99 | 330 | - | - | |
Cco10g0091 | 731 | Coils | Coil | 343 | 363 | - | - | |
Cco10g0091 | 731 | CDD | STKc_OSR1_SPAK | 16 | 279 | - | - | |
Cco10g0091 | 731 | MobiDBLite | consensus disorder prediction | 483 | 507 | - | - | |
Cco10g0091 | 731 | SUPERFAMILY | Protein kinase-like (PK-like) | 16 | 334 | IPR011009 | - | |
Cco10g0091 | 731 | MobiDBLite | consensus disorder prediction | 654 | 674 | - | - | |
Cco10g0091 | 731 | SMART | serkin_6 | 18 | 279 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cco10g0091 | Cco-Chr10:843819 | Cco10g1271 | Cco-Chr10:25464009 | 4.40E-142 | dispersed | |
Cco10g0091 | Cco-Chr10:843819 | Cco05g0526 | Cco-Chr5:4222715 | 3.10E-87 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
87130 | PF00069 | Pkinase | 3.90E-61 | CL0016 | Cco | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cco10g0091 | - | - | - | 0.0 |