Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco10g0091 ATGGGCAGGATGGGAGGAAGGCAAAGGACTTACACCGCTAATTCCAGTGATTATAAGCTTCTTGAAGAGATTGGTTATGGTGCTAGTGCTACTGTTTTTAGAGCGATCTATACTCCGTCAAATGAAGTCGTCGCCATCAAGTGTTTGGATCTTGATCGCTGCAATAGTAATCTTGATGATATACGTAGGGAGGCTCAAACAATGAGTTTGATAGATCATCCAAACCTTGTAAGGGCTTATTGTTCATTTGTTGTTGAACGAAACCTTTGGGTTGTCATGCCATTCATGGCAGAGGGTTCTTGTTTGCACCTAATGAAGACAGCGTACTCAGATGGCTTTGAAGAGGTTGCTATTGGTTCTATCTTGAAAGAGACTCTTAAAGCTTTGGAGTACCTTCATCGCCAAGGGCACATACATCGGGATGTCAAGGCTGGAAATATACTACTTGATAGTAATGGGTCTGTGAAGCTTGCTGATTTTGGTGTTTCAGCGTGCATGTTTGATACAGGTGACAGACAGCGCTCCAGAAATACCTTTGTGGGAACCCCATGCTGGATGGCACCGGAGGTATTGCAACCAGGAACTGGATATAATTCCAAGGCTGATATTTGGTCCTTTGGTATTACAGCTTTGGAGTTGGCTCATGGTCATGCACCATTTTCAAAATATCCTCCAATGAAGGTGCTTCTTATGACCATACAAAATGCTCCTCCTGGGCTGGATTATGATAGAGATAAACGGTTCTCTAAGTCTTTTAAAGAAATGGTTGCAATGTGCCTGGTGAAAGATCAAACCAAGAGGCCAACAGCTGAGAAACTTTTAAAGCACTCCTTTTTCAAGAATGCTAAGCCTCCAGAGGTTTCTTTGAAGAAACTATTTGCTAACTTGCCTCCTCTTTCACATCGTGTAAAGGAGCTGCAGCTTAAGGATGCTGCCCAGCTAGCCTTAAAGAAAATGCCTTCAGCAGAGCAAGAAGCATTATCACAGAGTGAGTACCAGCGAGGAGTTAGTGCATGGAACTTTGATGTCGAGGATTTGAAAGCCCAAGCTTCCCTGGTGAATGATGATATGGCAGAGATGAAGGAAGAGGAGGAGAGTATAAATTCTTGTAGTGTTAAGGATGCCTTCTGTCCTCAAGCTAGTATGAAGAATTTCAATTCATGTAATGAATCATATCAGGATGAGCATGGAGTAGGGGCAAGTGGTCAGGGATTGTCACAAGTAGAGTGCTTGAGCAAAAAGGGAAACTTTATGGAAAGTGATATGCTGAAAGCTGGGTTGCAAGAAAAAACTGGATGGAAGAGAAATGGAACTAGCAATGAAGCAGAAGCATCTACCTCTGGCCAAGACATTGTACAAGGCAAGACCAAAACCCAACTGCCAAAAGGTCGTCAAACTCAAAGTGGTCCACTTCTACCTGGCACTGTGCTCAGTCATTCTTTATCAGAAAGAGTGCGAGGCTCTGAGAGGTTTGATTCTGAAATTCAACCATCTGCTGAAAAAAATCGTCGAGAAGCACGGCAAGCTCCAAGCTTCAGTGGTCCACTAATGCTGCCAAACCGCGCCTCTGCAAACAGCCTATCAGCTCCAATAAAACCTTCTGGAGGGTTTAGAGATTCAATGGATGACAAATCCAAAGCTAATCTTGTGCAAATTAAGGGACGTTTTTCAGTGACGTCAGAGAACCTAGATCTCGTAAAGGATATTCCATTGAGCACAGTTTCACGTCGGTCTTCACAGAACTCTCCTCTACGAAAGTCAGCTAGTGTTGGTGATTGGATATTCGATTCCAAGCAGTCTGTCAGCCAACAACCCCCTAAGGAGGCTTGCAACGTCAACGTGCCTACATCAATTCTTTTGCCTCATCTTCAGAATCTTTTCCATCAGACCTCAATTCAGCAGGATCTTATAGTGAACTTGTTGAATAGCTTACAAGCAGCAGACGTGGTTGATGCTTCTCAAAACGGAAAGTTGCCTCCATTGCCCCGAAGCTCGGAGAATAATGGAAGTGCTGAAACAGCTGCAGTTGATAGAGAGCGTTTACTGCTTCGGAAAGTCTCTGAACTCCAAGCTAGAATGACGCATTTGACTTATGAATTGACCGCTGAAAAGTTGAAATACATTCAATTACAAGAGCAGTTCAACTCGGCATCTGGTCAGGAAGAAAACGAGATCAAGAGGGAAGAAAATGTATGA 2196 43.53 MGRMGGRQRTYTANSSDYKLLEEIGYGASATVFRAIYTPSNEVVAIKCLDLDRCNSNLDDIRREAQTMSLIDHPNLVRAYCSFVVERNLWVVMPFMAEGSCLHLMKTAYSDGFEEVAIGSILKETLKALEYLHRQGHIHRDVKAGNILLDSNGSVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVLQPGTGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDKRFSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFFKNAKPPEVSLKKLFANLPPLSHRVKELQLKDAAQLALKKMPSAEQEALSQSEYQRGVSAWNFDVEDLKAQASLVNDDMAEMKEEEESINSCSVKDAFCPQASMKNFNSCNESYQDEHGVGASGQGLSQVECLSKKGNFMESDMLKAGLQEKTGWKRNGTSNEAEASTSGQDIVQGKTKTQLPKGRQTQSGPLLPGTVLSHSLSERVRGSERFDSEIQPSAEKNRREARQAPSFSGPLMLPNRASANSLSAPIKPSGGFRDSMDDKSKANLVQIKGRFSVTSENLDLVKDIPLSTVSRRSSQNSPLRKSASVGDWIFDSKQSVSQQPPKEACNVNVPTSILLPHLQNLFHQTSIQQDLIVNLLNSLQAADVVDASQNGKLPPLPRSSENNGSAETAAVDRERLLLRKVSELQARMTHLTYELTAEKLKYIQLQEQFNSASGQEENEIKREENV 731
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 843819 854485 + CcPI632755_10g000910.1 Cco10g0091 189049
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco10g0091 731 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 9 710 IPR047173 GO:0043539(InterPro)
Cco10g0091 731 ProSiteProfiles Protein kinase domain profile. 18 279 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cco10g0091 731 FunFam Serine/threonine-protein kinase BLUS1 7 95 - -
Cco10g0091 731 FunFam serine/threonine-protein kinase BLUS1-like isoform X2 99 329 - -
Cco10g0091 731 MobiDBLite consensus disorder prediction 428 519 - -
Cco10g0091 731 ProSitePatterns Protein kinases ATP-binding region signature. 24 47 IPR017441 GO:0005524(InterPro)
Cco10g0091 731 Gene3D Phosphorylase Kinase; domain 1 7 95 - -
Cco10g0091 731 Pfam Protein kinase domain 18 279 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cco10g0091 731 MobiDBLite consensus disorder prediction 432 475 - -
Cco10g0091 731 MobiDBLite consensus disorder prediction 658 672 - -
Cco10g0091 731 Gene3D Transferase(Phosphotransferase) domain 1 99 330 - -
Cco10g0091 731 Coils Coil 343 363 - -
Cco10g0091 731 CDD STKc_OSR1_SPAK 16 279 - -
Cco10g0091 731 MobiDBLite consensus disorder prediction 483 507 - -
Cco10g0091 731 SUPERFAMILY Protein kinase-like (PK-like) 16 334 IPR011009 -
Cco10g0091 731 MobiDBLite consensus disorder prediction 654 674 - -
Cco10g0091 731 SMART serkin_6 18 279 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco10g0091 Cco-Chr10:843819 Cco10g1271 Cco-Chr10:25464009 4.40E-142 dispersed
Cco10g0091 Cco-Chr10:843819 Cco05g0526 Cco-Chr5:4222715 3.10E-87 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
87130 PF00069 Pkinase 3.90E-61 CL0016 Cco PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco10g0091 - - - 0.0