Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco10g0259 ATGGAAGATTTTGCAATAATGAGTGGGTTGGTTGGAGTGCAATTTGTATATGCTGGCAACTCTGTTTTTATGAGTTTTCTTATGTCTTTGGGAATTCATCCTTCAACTCTTGTCATCTTCTCCACATTCTCCACTTTTCTTATTGTCTCTCCCATTGCTATTTATTTTGAAAGATATAACTGGCCAAAGAAACTTAGTCTAAAGTTGATTCTTCAGCTTCTTCTCATATCTTTTGGAGGGGTAACATTGTTTCAGTCCCTTTTGCTGAAAGGGATACAGCTAACATCGCCGACTTTAGCGACGGCGATGCCGAATCTCGCCCCGGGACTCATCTTTGCCATTGCTTGGATCTTTAGATTAGAAAAAGTTCAGCTAAGTTGCATCTATAGCAAGATCAAGATTTTAGGTACATTTCTATGTGTGGTTGGCGCCTTCACCATGAGCATAATGCACAGAGCGTCATCGGATGCAGCTGCAAAAGACAATACCCCACGAGAATCACCTCCGACCGAGCAAGTGTTCGATGAACAGAAGATCCTCGGTTGTGTGTATCTCTTCTCAGCGATCGTCGTTTTATCTAGCATAGTTGTTTTGCAGGCATCGACACTAGGGGATTTCCCAGCACCGATGTCGTTGTGTGCAATAACGTCTCTCATTGGAGTGCTATTAACCATAGGTGTACAGATAGTTGAATATCAGAAACTGGACATTGGTTGGCCACTTCTCAGTGTTAAGGAATTGGTTGCCTATTTTGTTGTAGGCGGAAGCATTAGCGGCGCTTGCGTGAGCTTCAATGGGTGGGCAATGAAGAAACGAGGGCCAGTTTTGGTGTCGATGTTTAGTCCGATCGGAACCGTTTGCTCACTCATTCTCTCAGTTTTCACCTTGGGAGAATCCATCAACATTGGGAGCCTTGCTGGTATGTTCCTCATGTTCACCGGTCTCTACTTCGTCCTGTGGGCGAAAGCGAAGGAGCGTTACGCCAACCGAAACCGTCCCGAGAGTGAGTTCGACGTTGACAAGCCTCTTTTAAGTTGA 1038 44.8 MEDFAIMSGLVGVQFVYAGNSVFMSFLMSLGIHPSTLVIFSTFSTFLIVSPIAIYFERYNWPKKLSLKLILQLLLISFGGVTLFQSLLLKGIQLTSPTLATAMPNLAPGLIFAIAWIFRLEKVQLSCIYSKIKILGTFLCVVGAFTMSIMHRASSDAAAKDNTPRESPPTEQVFDEQKILGCVYLFSAIVVLSSIVVLQASTLGDFPAPMSLCAITSLIGVLLTIGVQIVEYQKLDIGWPLLSVKELVAYFVVGGSISGACVSFNGWAMKKRGPVLVSMFSPIGTVCSLILSVFTLGESINIGSLAGMFLMFTGLYFVLWAKAKERYANRNRPESEFDVDKPLLS 345
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 2836476 2838441 + CcPI632755_10g002590.1 Cco10g0259 189217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco10g0259 345 Pfam EamA-like transporter family 180 319 IPR000620 GO:0016020(InterPro)
Cco10g0259 345 Pfam EamA-like transporter family 10 148 IPR000620 GO:0016020(InterPro)
Cco10g0259 345 PANTHER WAT1-RELATED PROTEIN 11 330 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Cco10g0259 345 SUPERFAMILY Multidrug resistance efflux transporter EmrE 242 323 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco10g0259 Cco-Chr10:2836476 Cco10g1431 Cco-Chr10:27395446 1.70E-19 dispersed
Cco01g0432 Cco-Chr1:4311285 Cco10g0259 Cco-Chr10:2836476 1.50E-111 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco10g0259 - - - 0.0