Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco10g0361 ATGGGTTCTTGTCATTCGTCTCCTAAAGGGCGGCAGAACAGAGGCGGCGTTTATTCTGCCGCCGCAGCGCCAGCTGAGGCTCCGACGGCTTCTACAACAGAGTCATTTTCTTCTTCTTCTTCTTCATTTTTGTACTCGACGACCAGTAAGCGGCGTTGGTGGAATAAGAATTCGACTAAAACTTTCGGGGTTGGGGTTTGTTCAGAGAAGGTTCATGAATTTGAGGTTCCGGGGAGGAGTTGTTCAAATGGGTCATCGAGAATTGCTTGTTTGTATACGCAGCAGGGGAAGAAAGGGGTTAATCAAGACGCCATGATTGTGCAGGAGAATTTCAGTTCAAGAAGAGATACAGTATTTTGTGGGGTATTTGATGGACATGGTCCTTTTGGACATATGGTTGCAAAAAAAGTTCGTGATACTCTCCCTCTAATCCTGTGTACACAATGGACATCTAAATCAAATGAAGATCAAAGCAACCTCTTTAAGACAAGACATTCCCGAAGTTCGAATTCTGAAGCTTCTGTTGCCCTAGATGGAGATGAAGATTCTTACAAGTCATTGGAGGCCGAAGAAAATGAAAAATTCCCCAAAATGTTTCTACCACTCAAAGTATCTTTACTGAAGTCCTTCAAATTAATGGATAAAGAGTTGAAACTGCATCCCAAAATTGATTGTTTTTGCAGTGGATCGACGGCCGTGACTCTAATAAAGCAGGGTCAGAACCTTGTACTTGGAAATGTTGGTGACTCGAGAGCGGTGCTGGCTACGATAGACGAAGATAACTCTTTGATTCCAGTTCAATTAACAGTGGACTTGAAACCTGACCTTCCTGGTGAAGCTGCTAGGATCCAGCAATGCAAAGGAAGGGTCTTTGCTTTGCAGGATGAGCCCGAAGTTGCACGAGTATGGTTGCCAAATAATGATTCACCTGGTTTGGCGATGGCGAGAGCTTTTGGAGACTTTTGTCTGAAGGATTTCGGTCTTATTTCTGTTCCCGATGTTTATTATCGTCGCCTTACTGCGAGAGATCAGTTTGTAATTCTTGCCACTGATGGGGTTTGGGACGTTCTTTCGAATAAAGAAGCAATCGAAATTGTAGCATCAGCCCCTTCTCGAGAAACAGCCGCCAGAGCTCTTGTCGACTGTGCCGTTCGTGCATGGAGGCTGAAATATCCTACATCCAAGAATGACGATTGTGCTGTTGTATGTCTCTTTCTTGAGTATGAGCCTGAAGTAGAAGAAAACACAGAAACTTGTGCAAAACCAGTGGAAGAAGTTCTGGCCACGCCAAGCGAGGACGCAAAGGACATTGAAGTTGATTCTGATGATCGTAGAACGACTGTTGTCGAGCAGTCAGGCACTCTACAAAACTCTAATGAGATTGTACCTGTCTCTGACTCAACGGATGAGAAGGTGGCAGCTGGAGGCCGAAACCCATCGAAAAGAAGCTTAGCTGAGTGCATTTCAAGTGAAGAGGAGGAATGGTCTGCATTGGAGGGTATTACCAGAGTGAATAGTTTGCTAAGCCTTCCAAGGTTCCTCTCTGGTGACAAAAGATCAGGCAGTTGGAGGAAGTGGGTATGA 1584 44.95 MGSCHSSPKGRQNRGGVYSAAAAPAEAPTASTTESFSSSSSSFLYSTTSKRRWWNKNSTKTFGVGVCSEKVHEFEVPGRSCSNGSSRIACLYTQQGKKGVNQDAMIVQENFSSRRDTVFCGVFDGHGPFGHMVAKKVRDTLPLILCTQWTSKSNEDQSNLFKTRHSRSSNSEASVALDGDEDSYKSLEAEENEKFPKMFLPLKVSLLKSFKLMDKELKLHPKIDCFCSGSTAVTLIKQGQNLVLGNVGDSRAVLATIDEDNSLIPVQLTVDLKPDLPGEAARIQQCKGRVFALQDEPEVARVWLPNNDSPGLAMARAFGDFCLKDFGLISVPDVYYRRLTARDQFVILATDGVWDVLSNKEAIEIVASAPSRETAARALVDCAVRAWRLKYPTSKNDDCAVVCLFLEYEPEVEENTETCAKPVEEVLATPSEDAKDIEVDSDDRRTTVVEQSGTLQNSNEIVPVSDSTDEKVAAGGRNPSKRSLAECISSEEEEWSALEGITRVNSLLSLPRFLSGDKRSGSWRKWV 527
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 4223389 4232239 - CcPI632755_10g003610.1 Cco10g0361 189319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco10g0361 527 FunFam probable protein phosphatase 2C 33 83 409 - -
Cco10g0361 527 CDD PP2Cc 87 406 IPR001932 -
Cco10g0361 527 ProSiteProfiles PPM-type phosphatase domain profile. 88 406 IPR001932 -
Cco10g0361 527 PANTHER PROTEIN PHOSPHATASE 80 405 IPR015655 GO:0004722(InterPro)|GO:0004722(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Cco10g0361 527 Pfam Protein phosphatase 2C 193 384 IPR001932 -
Cco10g0361 527 SMART PP2C_4 77 404 IPR001932 -
Cco10g0361 527 Gene3D - 78 408 IPR036457 -
Cco10g0361 527 SUPERFAMILY PP2C-like 83 407 IPR036457 -
Cco10g0361 527 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco02g1866 Cco-Chr2:31524948 Cco10g0361 Cco-Chr10:4223389 6.10E-113 dispersed
Cco05g2014 Cco-Chr5:29263968 Cco10g0361 Cco-Chr10:4223389 1.50E-72 dispersed
Cco06g0490 Cco-Chr6:5377449 Cco10g0361 Cco-Chr10:4223389 5.30E-86 dispersed
Cco10g0361 Cco-Chr10:4223389 Cco11g0971 Cco-Chr11:15423598 4.30E-131 dispersed
Cco10g0361 Cco-Chr10:4223389 Cco02g0124 Cco-Chr2:1344607 5.40E-118 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco10g0361 - - - 0.0