Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cco10g0396 | ATGGAGGCTTCCAATCTTTCTCTATTGCTTTTGTTCTTCTTCATCTTCACTCTATTGCAAACTTCCATCATTGCCACCAAAAAGTCTTACATCGTTTACTTGGGTTCGGAATCTTCCTCTTCGTTGGATCCTTTCTCTTTGTCAGGGCACTCCAAACAAGTGACCACATTTCATTATGATTTGTTGGGATCTTTGTTGGGAAGTAAAAAGATGGCTGAGGAAGCAATTTTCTACTCCTATACTAGAAGTTTCAATGGTTTCGCAGCCAAACTTGAAGAGAAAGAAGCAGCAGATCTAGCAAGAAACCCTAAGGTGATATCGGTGTTTGAAAATAAGGCAAGAAAATTGCACACAACACGGTCGTGGAATTTTCTTGGAGTGGAGAACGATGTCGGAATTCCTTCAAACTCCATTTGGAATGCTGCAAAGTTTGGTCAAGATATAATCATAGCCAACATGGACACAGGTGTTTGGCCAGAATCAAAGAGCTTTAGTGATGAAGGGTATGGACCTGTGCCATCAAAGTGGAGGGGCTTTTGTCAAACCGACTCCACCTTCCATTGCAATAGAAAGCTTATTGGAGGAAGATATTTCTACAAAGGATATGTAGCCAGCGGAGGCACTCTCAACGCCACTTTACTCACCGTACGGGACCACGACGGCCATGGAACCCACACTCTCTCCATCGCCGCCGGAAACTTCGTTGCCGAAGCCAACGTTTTTGGCCATGGCAACGGTACAGCCAAAGGCGGTGCTCCAAAAGCCCGTGCCGCCGCCTACAAGGTCTGCTGGCCTTCATTATTTGACTCACAGTGCTTGGAGGCTGATATTCTTGCTGCCTTTGAAGCTGCTGTCGCCGATGGAGTCGACGTCATATCGGCTTCCCTCGGTGGAACCGCCGATGAATATTTCAACGATCCACTTGCTATCGCCGCTTTCCACGCTGTTCAACAAGGCGTTGTCGTCGTCTTCTCCGCTGGCAACTCGGGGCCTTTTCCGATGACCGTCACCAATATTGCCCCCTGGGAAATCACCGTCGCGGCGAGCACCATAGACAGAGATTTCGCCAGTTACGTGGCGATCGGAAACAAGAAACACATCAAGGGTGTAAGTCTTTCTTCAACTGCCCCATTACCGAAGAAGTTCTATCCATTGATCGACTCCGTGAATGCAAAACTCAGCAATGTCACCGAATTCCATGCGCAATTTTGCGGGAAGGGGACGCTTGATCCAATGAAAGTGAAGGGAAAGATAGTGATTTGTCAAACAGGAGAGATTGAAGGAGTGGACAAGAGCTACCAAGCTGCTCGAGCTGGTGCTGTGGGAGTAATTGTAGCTAATGATATTGAAAAAGGAAATGAAATTTATCCTCAATTACACTTCCTTCCAGCTTCAGATATTACCAATACTGATGCTCAATTACTCCAAACATACCTCAAATCCACTACAAATCCAATGGCTCATTTAACAAAAGTCAAAACTCAGCTCAATATCAAACCAGCTCCAGTCATTGCTACCTTCTCTTCTAGAGGCCCCAACCCAATTAGTCCCTCTATTCTCAAGGTCACAGATCTCAACTACCCGTCGATTTCAGTTGGGGAATTGAAAATCGGTGCTCCTGTGACAATTAATAGAAGAGTTAAGAATGTGGGAAGTCCAGGCACATATGTAGCAAGTGTCAAGGCGTCGCCTGGAGTTGCGGTTTCGGTTGAGCCGAGCACGTTGCAGTTTAGTAATGTGGATGAGGAGAAGGCCTTCAAGTCTTACATTGTTTACTTGGGATCACATTCGCACGGGCTGAATCCTTCTGCAGTCGATCTCCAAATCGCAACGGAATCTCACTACAGTTTACTTGGGTCATTGTTAGGAAGCAATGAGGCAGCCAAGGAAGCAATTTTCTATTCCTACAACAGACATATCAATGGCTTTGCAGCCATGCTTGACCAAAAAGTTGCAGAAGATTTAGCAAGAAATCCTGCTGTGGCATCAGTCCATGAGAACAAGGGAAGAAAACTACACACAACAAGTTCATGGAAATTTCTTGGAGTAGAGCATGATGATGGAATTCCAACAAACTCTATTTGGAATCTTGCAAGTTTTGGTGAATCTACAATCATTGCCAACCTTGACACAGGCGTTTGGCCAGAATCAAAGAGTTTCAGTGATGAAGGATATGGACCTGTTCCCACAAGGTGGAGGGGAAGTTGTGAAGGTGGCTCCAAATTTCATTGCAACAGGAAACTGATTGGAGCAAGGTATTTCAACAAAGGGTACGCAGCTTATGTGGGATCCCTCAATGCAAGCTATGAAACAGCAAGAGACCATGAAGGGCATGGAACACACACATTATCTACTGCTGGAGGCAATTTCATTTCAGGGGCTAATGTATTTGGGAATGGTAATGGCACCGCAAAAGGAGGGTCCCCTAAAGCCCTTGTTGCTGCCTATAAAGTATGCTGGCCTCAAGTGGATTCTGGTGGTGCTTGTTTTGATGCTGACATTTTAGCAGCCATTGAAGCTGCTATTAGTGATGGAGTTGATGTTCTCTCACTTTCACTTGGTGGAGATTCCAAAGATTTTTCAGACGACGTTACGGCTATCGGGGCCTTCCATGCCGTTCAACAAGGTATCGTCATTGTTTGCTCTGCTGGAAACTCTGGACCAGCTCCAGGGACAGTAGAAAATGTGGCACCCTGGCTCTTAACTGTGGGTGCTAGCACAATCAACAGACAGTTTACTAGTTATGTGGCCCTTGGAAACAAGAAGCATATCAAGGGTGCAAGTCTTTCTGATAAAATATTGCCAGCTCAGAAATTCTATCCATTGATCAGTGCTGCAGATGCAAAAGCCAACAATGTCTCGTTTGACAATGCCCAACTGTGTGAGGAAGGGTCACTTAATCCCAAAAAGGTAAAAGGGAAGATTATAATTTGCCTTAGAGGGGAAAATGCAAGAATGGACAAAGGTTATGTGGCAGCTCAAGCAGGTGCTGTTGGAATGATTCTTGCTAACACTGAGCAAAATGGGGATGAACTTATAGCTGATGCACACCTACTTCCTGTTTCCCATGTAAGCTATACTGATGGCCAATCAATCTACCAATACATCAATTCCACCAAGACTCCAATGGCTTACATGACTCATGTAAGAACAGAGATGGGAATCAAACCAGCACCAGTTATGGCTTCATTCTCATCAAGAGGTCCCAATACAATTGAAGAGTCAATACTCAAGGTTTCCATTCGTTATACTGTATAA | 3258 | 45.03 | MEASNLSLLLLFFFIFTLLQTSIIATKKSYIVYLGSESSSSLDPFSLSGHSKQVTTFHYDLLGSLLGSKKMAEEAIFYSYTRSFNGFAAKLEEKEAADLARNPKVISVFENKARKLHTTRSWNFLGVENDVGIPSNSIWNAAKFGQDIIIANMDTGVWPESKSFSDEGYGPVPSKWRGFCQTDSTFHCNRKLIGGRYFYKGYVASGGTLNATLLTVRDHDGHGTHTLSIAAGNFVAEANVFGHGNGTAKGGAPKARAAAYKVCWPSLFDSQCLEADILAAFEAAVADGVDVISASLGGTADEYFNDPLAIAAFHAVQQGVVVVFSAGNSGPFPMTVTNIAPWEITVAASTIDRDFASYVAIGNKKHIKGVSLSSTAPLPKKFYPLIDSVNAKLSNVTEFHAQFCGKGTLDPMKVKGKIVICQTGEIEGVDKSYQAARAGAVGVIVANDIEKGNEIYPQLHFLPASDITNTDAQLLQTYLKSTTNPMAHLTKVKTQLNIKPAPVIATFSSRGPNPISPSILKVTDLNYPSISVGELKIGAPVTINRRVKNVGSPGTYVASVKASPGVAVSVEPSTLQFSNVDEEKAFKSYIVYLGSHSHGLNPSAVDLQIATESHYSLLGSLLGSNEAAKEAIFYSYNRHINGFAAMLDQKVAEDLARNPAVASVHENKGRKLHTTSSWKFLGVEHDDGIPTNSIWNLASFGESTIIANLDTGVWPESKSFSDEGYGPVPTRWRGSCEGGSKFHCNRKLIGARYFNKGYAAYVGSLNASYETARDHEGHGTHTLSTAGGNFISGANVFGNGNGTAKGGSPKALVAAYKVCWPQVDSGGACFDADILAAIEAAISDGVDVLSLSLGGDSKDFSDDVTAIGAFHAVQQGIVIVCSAGNSGPAPGTVENVAPWLLTVGASTINRQFTSYVALGNKKHIKGASLSDKILPAQKFYPLISAADAKANNVSFDNAQLCEEGSLNPKKVKGKIIICLRGENARMDKGYVAAQAGAVGMILANTEQNGDELIADAHLLPVSHVSYTDGQSIYQYINSTKTPMAYMTHVRTEMGIKPAPVMASFSSRGPNTIEESILKVSIRYTV | 1085 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 4645176 | 4657597 | + | CcPI632755_10g003960.1 | Cco10g0396 | 189354 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cco10g0396 | 1085 | FunFam | Subtilisin-like protease SBT5.3 | 19 | 117 | - | - | |
Cco10g0396 | 1085 | FunFam | subtilisin-like protease SBT1.5 | 352 | 496 | - | - | |
Cco10g0396 | 1085 | Pfam | Fibronectin type-III domain | 524 | 587 | IPR041469 | - | |
Cco10g0396 | 1085 | Gene3D | Peptidase S8/S53 domain | 674 | 940 | IPR036852 | GO:0004252(InterPro)|GO:0006508(InterPro) | |
Cco10g0396 | 1085 | Gene3D | Peptidase S8/S53 domain | 118 | 380 | IPR036852 | GO:0004252(InterPro)|GO:0006508(InterPro) | |
Cco10g0396 | 1085 | CDD | PA_subtilisin_like | 915 | 1044 | - | - | |
Cco10g0396 | 1085 | Pfam | Subtilase family | 701 | 1071 | IPR000209 | GO:0006508(InterPro)|GO:0008236(InterPro) | |
Cco10g0396 | 1085 | CDD | Peptidases_S8_3 | 115 | 351 | IPR034197 | - | |
Cco10g0396 | 1085 | Gene3D | Peptidase S8 propeptide/proteinase inhibitor I9 | 573 | 673 | IPR037045 | - | |
Cco10g0396 | 1085 | Gene3D | Peptidase S8 propeptide/proteinase inhibitor I9 | 18 | 117 | IPR037045 | - | |
Cco10g0396 | 1085 | Gene3D | - | 381 | 499 | - | - | |
Cco10g0396 | 1085 | FunFam | Subtilisin-like protease SBT5.3 | 577 | 673 | - | - | |
Cco10g0396 | 1085 | ProSiteProfiles | Serine proteases, subtilase domain profile. | 677 | 1085 | - | - | |
Cco10g0396 | 1085 | CDD | PA_subtilisin_like | 358 | 487 | - | - | |
Cco10g0396 | 1085 | SUPERFAMILY | PA domain | 403 | 500 | IPR046450 | - | |
Cco10g0396 | 1085 | SUPERFAMILY | Subtilisin-like | 672 | 1071 | IPR036852 | GO:0004252(InterPro)|GO:0006508(InterPro) | |
Cco10g0396 | 1085 | FunFam | subtilisin-like protease SBT1.5 | 909 | 1053 | - | - | |
Cco10g0396 | 1085 | Pfam | Subtilase family | 145 | 519 | IPR000209 | GO:0006508(InterPro)|GO:0008236(InterPro) | |
Cco10g0396 | 1085 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN | 589 | 1079 | IPR045051 | - | |
Cco10g0396 | 1085 | SUPERFAMILY | Subtilisin-like | 116 | 518 | IPR036852 | GO:0004252(InterPro)|GO:0006508(InterPro) | |
Cco10g0396 | 1085 | ProSiteProfiles | Serine proteases, subtilase domain profile. | 121 | 611 | - | - | |
Cco10g0396 | 1085 | SUPERFAMILY | PA domain | 968 | 1046 | IPR046450 | - | |
Cco10g0396 | 1085 | Pfam | Peptidase inhibitor I9 | 588 | 673 | IPR010259 | - | |
Cco10g0396 | 1085 | Pfam | Peptidase inhibitor I9 | 29 | 117 | IPR010259 | - | |
Cco10g0396 | 1085 | Pfam | PA domain | 957 | 1032 | IPR003137 | - | |
Cco10g0396 | 1085 | Pfam | PA domain | 403 | 475 | IPR003137 | - | |
Cco10g0396 | 1085 | Gene3D | - | 941 | 1047 | - | - | |
Cco10g0396 | 1085 | CDD | Peptidases_S8_3 | 671 | 908 | IPR034197 | - | |
Cco10g0396 | 1085 | FunFam | Subtilisin-like protease SBT1.5 | 703 | 929 | - | - | |
Cco10g0396 | 1085 | FunFam | Subtilisin-like protease SBT1.5 | 147 | 366 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cco10g0394 | Cco-Chr10:4613315 | Cco10g0396 | Cco-Chr10:4645176 | 6.40E-194 | dispersed | |
Cco10g0396 | Cco-Chr10:4645176 | Cco10g0400 | Cco-Chr10:4718153 | 1.20E-183 | dispersed | |
Cco10g0395 | Cco-Chr10:4632477 | Cco10g0396 | Cco-Chr10:4645176 | 1.80E-158 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cco10g0396 | - | - | - | 0.0 |