Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco10g0429 ATGACCCCAAAAAATCTCCTTGTTTTTTCCCTTTTCCTGTTTCTCTTCACTCCTCCAAGAACTGAGTGTATTGGCTTCGATTTCAGTTCTTTCAACATCAGAAACCTCACTCTCCTCGGCGATTCCCACCTCCGCGATGGCGTTATCGGCCTCACCAAAGAGCTCGGAGTTCCTTCCTCGAGCGCCGGCGCCGTAATTTACAACAATCCAATCGGATTCTACGACGCCGATGCCAACATCACTGCCTCCTTCTCTACAAGATTCTCTTTCTCCATCACCAACATTAACCCCACTTCCTCCGGCGATGGCCTTTCCTTTTTCCTCTCCCCCGATAACCAAACCCTCGGCAGCCCCGGTGGGTATTTGGGTCTCGTCAATTCTTCCCAATTGACCAAGAACAAGTTTCTGGCGGTTGAATTTGATACACGGCTTGATTCTGTCTTCAACGATCCTAATGCCCACCATGTTGGCTTCGACATTGAGAGCTTGATTTCGATCAAGACGGCTAACCCTGCTTCTCAAGGTGTAAATCTCAAGAGTGGGAAGTCGATTACGGCTTGGATTGAGTACAAGAATGAGGAAAATAGGTTGAGGGTTTTCTTGAGTAATTCTGCTTTGAAACCTTCCAAGGCACTTCTCGACGTCGGTGTCGATCTTTCGAGCTATCTTAAGGAGGTTATGTATGTCGGGTTTTCCGGTTCGACTGAAGGGAGTACTGAGCTTCATTTGATTGAGAGTTGGAGTTTTAATACTTCTGGGTTTGTTCCTGCTAGGCCTAGATTTAACCCTCATAATGTTTCTGATAGCTCTGTGATTGTCTCACCTAATATTTCTATATCTGATTCTGAGGAAGAAGGTGGAGGAAAGTGGGAATCTTCAAAGACAACCATTGTCCAAATAGACTGA 906 46.03 MTPKNLLVFSLFLFLFTPPRTECIGFDFSSFNIRNLTLLGDSHLRDGVIGLTKELGVPSSSAGAVIYNNPIGFYDADANITASFSTRFSFSITNINPTSSGDGLSFFLSPDNQTLGSPGGYLGLVNSSQLTKNKFLAVEFDTRLDSVFNDPNAHHVGFDIESLISIKTANPASQGVNLKSGKSITAWIEYKNEENRLRVFLSNSALKPSKALLDVGVDLSSYLKEVMYVGFSGSTEGSTELHLIESWSFNTSGFVPARPRFNPHNVSDSSVIVSPNISISDSEEEGGGKWESSKTTIVQID 301
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 5065480 5067495 - CcPI632755_10g004290.1 Cco10g0429 189387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco10g0429 301 SUPERFAMILY Concanavalin A-like lectins/glucanases 23 257 IPR013320 -
Cco10g0429 301 CDD lectin_legume_LecRK_Arcelin_ConA 26 253 IPR001220 GO:0030246(InterPro)
Cco10g0429 301 MobiDBLite consensus disorder prediction 279 301 - -
Cco10g0429 301 Gene3D - 22 259 - -
Cco10g0429 301 Pfam Legume lectin domain 25 256 IPR001220 GO:0030246(InterPro)
Cco10g0429 301 ProSitePatterns Legume lectins beta-chain signature. 136 142 IPR019825 -
Cco10g0429 301 PANTHER CONCANAVALIN A-LIKE LECTIN FAMILY PROTEIN 4 270 IPR050258 -
Cco10g0429 301 FunFam L-type lectin-domain containing receptor kinase VIII.1 22 262 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco10g0429 Cco-Chr10:5065480 Cco10g2034 Cco-Chr10:33759257 1.20E-56 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco10g0429 - - - 0.0