Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco10g0449 ATGGCTCTACAGAGTTTTGGTTCATTAATCAAAGAGCCTCGTTTTGTAGTTAGAAAGTTTCTTGCTAGACCTCAGCATGAAGGCCTTGGCGCTGTTGTAAGAAGAAGCATCGGCAGGTTTGAGCTCAAATACTTTGATCCATTCCTTGTTCTCGATGAGTTTTCTGTTACTGCACCTGCTGGGTTTCCTGATCATCCACATAGAGGATTTGAAACTGTCACTTACATGTTAGAGGGAGCAATGACACATGAAGATTTCAAAGGGCATAAAGGAAGAATTGGAGCTGGTGACTTGCAATGGATGACCGCTGGCAAAGGCATTGTTCACTCTGAAATGCCTGCATCCCATGGCACCCAACATGGCTTACAACTTTGGATCAATCTTTCCTCCAAACACAAAATGATTGAGCCAAGGTATCAAGAAATACACAATGAAGACATAGTAGAAGCTACAAGAGAAGGAGTAAAAGTGAGAGTGATAGCAGGGGAAGCCTTGGGAGCAAAATCCCCAATCTACACCAAAACTCCAACCATGTACTTGGACTTCACTCTCGGCCCGGGATCTCGCATCGAGCAGCCGATCCCGGTGGGGTGGAATGCGTTCGTGTACGTACTAGAAGGCGAGGGCGGAGTGTTCGGGAGCATGAAATCGATGCCGATTATGCCACATCACCTTCTTTTGTTGGGGAATGGGGATGGGTTGGAGGCTTGGAACAAGTCCTCCTCCAAAGCCCTAAGGTTCATATTGGTTGGGGGTCAGCCATTGAATGAGAGCGTTGTGCAGTTGGGGCCATTTGTGATGAACACTCAAGAAGAAATTGACCAAACCATAGAGGATTTTGAGAATTGTACAAATGGATTTGAGAGAGCAAGGCATTGGAGTTCACAACCTTAA 894 45.97 MALQSFGSLIKEPRFVVRKFLARPQHEGLGAVVRRSIGRFELKYFDPFLVLDEFSVTAPAGFPDHPHRGFETVTYMLEGAMTHEDFKGHKGRIGAGDLQWMTAGKGIVHSEMPASHGTQHGLQLWINLSSKHKMIEPRYQEIHNEDIVEATREGVKVRVIAGEALGAKSPIYTKTPTMYLDFTLGPGSRIEQPIPVGWNAFVYVLEGEGGVFGSMKSMPIMPHHLLLLGNGDGLEAWNKSSSKALRFILVGGQPLNESVVQLGPFVMNTQEEIDQTIEDFENCTNGFERARHWSSQP 297
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 5301700 5304236 - CcPI632755_10g004490.1 Cco10g0449 189407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco10g0449 297 Gene3D Jelly Rolls 27 281 IPR014710 -
Cco10g0449 297 Gene3D Jelly Rolls 148 255 IPR014710 -
Cco10g0449 297 CDD cupin_pirin_C 176 254 - -
Cco10g0449 297 Pfam Pirin 33 126 IPR003829 -
Cco10g0449 297 SUPERFAMILY RmlC-like cupins 14 295 IPR011051 -
Cco10g0449 297 Pfam Pirin C-terminal cupin domain 179 286 IPR008778 -
Cco10g0449 297 PANTHER PIRIN-RELATED 11 296 IPR012093 -
Cco10g0449 297 CDD cupin_pirin_N 31 128 - -
Cco10g0449 297 FunFam pirin 27 164 - -
Cco10g0449 297 PIRSF Pirin 12 294 IPR012093 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco09g2296 Cco-Chr9:37210392 Cco10g0449 Cco-Chr10:5301700 2.90E-132 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco10g0449 K06911 - csv:101204082 535.798