Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco10g0528 ATGCAATTTCCAACGCGAGTTTTGATCTCTGTTTCTTTCCTTATTTCCCTTCTTGTTTTTTCCAATTTTTCTTTCTGTTCTGCACAAGACTATATAATTGGCGGCGGCGGCGGCGGCGACGACGACGACGAGGCGAAGCCAGCGGCGCCACCGCCGGAGCAGAATAACTGTAATGGGATATTCTTGTCCTATACATTTATTTCGCGTGAGAAGGAGCTGCCACGGCTGAAGAACGCGACGGCTCAGTCATGGGCATTCAAGTCGGAGGCGTTGATTCTGAATGCGGGATCGACAGAGCTGAAGGCGTGGAAGATGTTCATCGGATTTCACCACCGGGAAATCCTGGTGTCGGCGGCTGGCGCGGTGGTGATGGATGGGTCGGATTTCCCTGTGGACGTTGGGAATGGAACCACTTTGGCTGGGTACCCCATGACGGATCTGAAAACGTCGATTGAAACCGCGGGAGATATTAATCAGATTCAGGCGACGGTGGAGCTGACCGGAACGCAGTTCGGAATCAAGCCGCCAGGTGTTCCGATGCCAAAGACGATTCGCCTTGCTAACGATGGATTTAAATGCCCTGCGCCTCGCCGTCGCGGTAAGAGAACAATGCATGTATGCTGCAAAAAGGATCCGAAGTTCAAGGTGAAAGCACCAAAGAAAACCAGATTTTTCCCTCGCCAAAATGGAGATCTCTCACTCACTTATGATATTATGCAAGCTTATGGAAATAACTATCTTGCTCAAGTCACAATCGACAACAACAATCCTCTAGGACGTCTTGATCACTGGAACTTAACTTGGGAATGGATGAGAGGCGAGTTCATTCAAAGCATGAGAGGAGCTTATACTCATACAAGAGATTTATCTCAATGCATTTATGGTCCTGCAGGCCAATACTATCAAGATTTCGACTTCTCTCAAGCCATGAGTTGCGATAAAAGGCCGGTCATTGCCGATCTTCCAGCCGATCGAAAAGACGACGATAAGGTTGGGAAGTTGCCGTATTGCTGTAGGAATGGAAGTTTGTTGCCAACATTGATGGATGAGAGCAAAGCAAGGTCTATTTTTCAATTACAAGTCTATAAGCTTCCACCTGATATGAACCGAACGGCTCTTAATCCACCGCAGAAATGGAAGATCTCGGGCATTCTAAACCCGAAATACGTTTGTGCAGCTCCAATCCGGGTTGAACCGACGGAGTTTCCTGACCCTAGTGGACTTCAGGCAACGAGTACCGCGATTGCAAGTTGGCAAATTGTTTGCAACATTACAAGGCCAAAGGTGAAGCAATCGAAATGCTGTGTTTCATTTTCAGCATATTATAATGACTCTGTAATTCCTTGCAATACTTGTGCCTGTGGTTGTGACAACACTGATACTGATACTTGCAATCCAAATGCACATGCAATGCTGCTCCCTCCAGAAGCACTTTTGGTTCCATTTGTTAACAGGACAGCGAAAGCAAGAGCTTGGGCTAAAATTAAGCATTACCCAAATCCAAAGAAGATGCCTTGTCCTGATAACTGTGGAGTTAGCCTCAATTGGCATATTAACTCTGATTATACCAATGGATGGACTGCAAGATTAACACTTTTCAATTGGGAAGATTATCCATTTGAGGATTGGTTTACTGCTATTCAGTTGAACAAGGCCGGTCGCGGTTACGAAAACGTTTATTCCTTCAACGGAACCCGGCTTCCCAACATAAAAAACACCATCTTCCTCCAAGGTTTGCCTGGTTTAACATACTTGATGGGAGAGGTAAATGGGACCAATCCTAGATCTGATCCAAGAGTTCCAGGGAAGCAACAATCTGTCATTTCTTTCACCAAGAAAGGCCTGCGCGACATCGACATACTAGGAGGTGACGGTTTTCCAATCAAAGTGTTTTTCAATGGCGAAGAATGTGCGCTTCCAAAGGAAATTCCCACAGCAAGTTCAGGCCACCACTCTCGCCACGGTTTCATGCTACTCATCTTCATCTTAGCTCTTACTTTCGCGTTTATAACCGATCGCTTCCATTGA 2028 46.25 MQFPTRVLISVSFLISLLVFSNFSFCSAQDYIIGGGGGGDDDDEAKPAAPPPEQNNCNGIFLSYTFISREKELPRLKNATAQSWAFKSEALILNAGSTELKAWKMFIGFHHREILVSAAGAVVMDGSDFPVDVGNGTTLAGYPMTDLKTSIETAGDINQIQATVELTGTQFGIKPPGVPMPKTIRLANDGFKCPAPRRRGKRTMHVCCKKDPKFKVKAPKKTRFFPRQNGDLSLTYDIMQAYGNNYLAQVTIDNNNPLGRLDHWNLTWEWMRGEFIQSMRGAYTHTRDLSQCIYGPAGQYYQDFDFSQAMSCDKRPVIADLPADRKDDDKVGKLPYCCRNGSLLPTLMDESKARSIFQLQVYKLPPDMNRTALNPPQKWKISGILNPKYVCAAPIRVEPTEFPDPSGLQATSTAIASWQIVCNITRPKVKQSKCCVSFSAYYNDSVIPCNTCACGCDNTDTDTCNPNAHAMLLPPEALLVPFVNRTAKARAWAKIKHYPNPKKMPCPDNCGVSLNWHINSDYTNGWTARLTLFNWEDYPFEDWFTAIQLNKAGRGYENVYSFNGTRLPNIKNTIFLQGLPGLTYLMGEVNGTNPRSDPRVPGKQQSVISFTKKGLRDIDILGGDGFPIKVFFNGEECALPKEIPTASSGHHSRHGFMLLIFILALTFAFITDRFH 675
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 6301955 6305682 - CcPI632755_10g005280.1 Cco10g0528 189486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco10g0528 675 Pfam COBRA-like protein 246 425 IPR006918 GO:0010215(InterPro)|GO:0016020(InterPro)
Cco10g0528 675 PANTHER COBRA-LIKE PROTEIN 7 11 670 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco05g0753 Cco-Chr5:6189918 Cco10g0528 Cco-Chr10:6301955 2.40E-224 dispersed
Cco05g1672 Cco-Chr5:23496507 Cco10g0528 Cco-Chr10:6301955 5.40E-226 dispersed
Cco05g1673 Cco-Chr5:23499631 Cco10g0528 Cco-Chr10:6301955 2.50E-60 dispersed
Cco10g0528 Cco-Chr10:6301955 Cco07g1675 Cco-Chr7:30751789 3.50E-29 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco10g0528 - - - 0.0