Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco10g0726 ATGGCGACCAACAAGGGGAAAGAACCAGTTTGTGTGACCGGAGCCAATGGATTCATCGGATCCTGGGTCGTCCGTACGCTTTTGGAATCTGGCTACACAACAATACATACCTCCATCTTCCCCGGCTCCGATTCTTCCCATTTGTTCAATCTCCAGGCCTCCACTAACCCTAATGCTAGCCTTAGGGTTTTCGAAGCGAATGTGATGGACGGCGAGGCGGTGGCCAGGGCTGTCGAAGGTTGCAAGGGCGTATTCCACATTGCCTCACCCTGCACATTGGAGGATCCGATTGATCCGCAGAAAGAATTGGTGGAGCCGGCGGTGCAAGGCACTGTCAATGTTCTTAATGCGGCGAAGAAGTTCGGAGTGAGGCGTGTTGTTCTTACTTCTTCTATTTCTGCTCTTGTCCCTAACCCCGGTTGGCCGTCTGGTATGCCTTTCGATGAATCCTCATGGACGGACATAGAGTACTGCAAATCGCGCAAGAAATGGTATCCAGTTTCAAAAACATTGGCAGAGAAATCGGCATGGGAGTTTGTAGAGAATCATGGACTGGATGTTGTTTCCATCCTGCCAGCCACATGTCTTGGTCCTCTTCTCCAACCTAATTTGAACGCAAGTTGTGCTGTATTGCTGCAGTTGCTCCAGGGATCCCAGGATAGTCAGGAATATCACTGGTTGGGTGCTGTGCATGTCAAAGATATTGCAAAAGCACAAATTTTATTGTTTGAGTCTCCCACTGCTTCTGGTAGATATCTTTGCACCAATGGTATCTATCAATTTTCCGATTTTGCGGACAAAGTCTCAAAAATATGCCCTCAATTTCCAGTTCACAGATTTGTGGGAGAAACACAACCCGGGTTGGTTGCCTGCAAAGATGCAGCCAAGAGGTTAATTGATCTGGGACTTGTTTTCACCCCTCTTGAAGTTGCCATTCAAGATACCCTTGAGAGTCTTAGAAGCAAAGGCTTTTTGGATCAGTGA 984 47.87 MATNKGKEPVCVTGANGFIGSWVVRTLLESGYTTIHTSIFPGSDSSHLFNLQASTNPNASLRVFEANVMDGEAVARAVEGCKGVFHIASPCTLEDPIDPQKELVEPAVQGTVNVLNAAKKFGVRRVVLTSSISALVPNPGWPSGMPFDESSWTDIEYCKSRKKWYPVSKTLAEKSAWEFVENHGLDVVSILPATCLGPLLQPNLNASCAVLLQLLQGSQDSQEYHWLGAVHVKDIAKAQILLFESPTASGRYLCTNGIYQFSDFADKVSKICPQFPVHRFVGETQPGLVACKDAAKRLIDLGLVFTPLEVAIQDTLESLRSKGFLDQ 327
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 10559276 10562024 + CcPI632755_10g007260.1 Cco10g0726 189684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco10g0726 327 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 10 317 IPR050425 GO:0016616(PANTHER)
Cco10g0726 327 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 9 320 IPR036291 -
Cco10g0726 327 CDD FR_SDR_e 10 303 - -
Cco10g0726 327 FunFam Cinnamoyl-CoA reductase 1 3 327 - -
Cco10g0726 327 Gene3D - 2 327 - -
Cco10g0726 327 Pfam NAD dependent epimerase/dehydratase family 10 248 IPR001509 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco03g0035 Cco-Chr3:346060 Cco10g0726 Cco-Chr10:10559276 3.50E-91 dispersed
Cco10g0726 Cco-Chr10:10559276 Cco10g1284 Cco-Chr10:25741373 1.40E-63 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco10g0726 - - - 0.0