Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco10g0747 ATGGGAGCCCATCCAGCATTGTTGGGCCAAGCAGACATCTCTGACTCTAACTCATTGATATCGCCCTCTCATTTTTCTTCGCCTCTGCTGCAACTTGCTAAGGACCTCTACTTCTCCATCGGATCTCTGAGCTTCGACAGCCTTCCTTTCTGTGAATATATACACCTTTGTGATCGGATAATTTTGGCAATTCTTCGGAGTAAAGAACTCGTAACTGAAATGGCTGGGGGAGGAATGATCCGGCAGTTGCTGAGGAAATTTCCATCTCAATCTTCAACCCCTCCATTGACCTCATCCCTTATTTCAAAGAATCAGGAAGCTGGCTTTGCTGGGATGAACTCCTTTAGAAGGCTGGCTCTTCTTGGAGCAGGCATTTCAGGGTTTTTCAGTTTTGCAACTTTGGCATCTGCTGATGAGGCAGAACATGGTTTGGAGTGTCCAAGCTACCCGTGGCCTCACCAGGGCATTTTGAGTTCATATGATCATGCTTCGATTCGTCGTGGTCATCAGGTTTACCAACAAGTTTGTGCATCTTGTCATTCCATGTCTTTAATATCATACCGTGATTTGGTTGGTGTTGCATATACTGAAGAGGAGACAAAAGCTATGGCTGCTGAAATTGAGGTAGTTGATGGACCCAATGATGAGGGTGAGATGTTCACTCGTCCAGGTAAACTCAGTGACCGGTTTCCTCAACCATATGCAAATGAACAAGCTGCTAGATTTGCTAATGGTGGAGCATACCCTCCAGATCTGAGCCTTATCACAAAAGCTCGTCATAATGGTCAGAATTATGTATTTGCCCTTCTTACTGGTTATCGTGATCCACCTGCTGGTGTTTCGATCCGAGAGGGTCTGCACTATAACCCTTATTTCCCTGGGGGAGCAATTGCGATGCCTAAGATGCTTAATGATGGAGCTGTTGAGTACGAAGATGGTACCCCTGCCACAGAAGCACAGATGGGGAAAGATGTTGTATCGTTCTTGTCATGGGCTGCTGAACCAGAAATGGAAGAAAGGAAACTGATGGGATTCAAATGGATCTTTGTGCTCTCTCTGGCTCTACTTCAGGCTGCATATTACCGGCGATTGAAGTGGTCGGTTTTGAAGTCCCGCAAGCTGGTTCTTGATGTTCAGCGAAGATGTGTTTCCAAAACGAACAAGATACGGGTTGAGAAGGGGAAGTTAGCAAAGTTAGACAAGATTGGAATGGGCATAGGAACATGGATCGATGTACCAGATCTGCTAATGCTCCCAGCTTGGTGCAAAAGGCTTCTCGCGGGTCCTTTTTCAAGCCATTCTCGAATACGATACGGTATGGTACTCGTGACCCTGCTGGTGGTTGCCACTGCCTCACACTTAAATGCCGCCAGCTCTGTCTTCCTACTTAAGCTTAAGGCATCCACGACCTAG 1413 46.57 MGAHPALLGQADISDSNSLISPSHFSSPLLQLAKDLYFSIGSLSFDSLPFCEYIHLCDRIILAILRSKELVTEMAGGGMIRQLLRKFPSQSSTPPLTSSLISKNQEAGFAGMNSFRRLALLGAGISGFFSFATLASADEAEHGLECPSYPWPHQGILSSYDHASIRRGHQVYQQVCASCHSMSLISYRDLVGVAYTEEETKAMAAEIEVVDGPNDEGEMFTRPGKLSDRFPQPYANEQAARFANGGAYPPDLSLITKARHNGQNYVFALLTGYRDPPAGVSIREGLHYNPYFPGGAIAMPKMLNDGAVEYEDGTPATEAQMGKDVVSFLSWAAEPEMEERKLMGFKWIFVLSLALLQAAYYRRLKWSVLKSRKLVLDVQRRCVSKTNKIRVEKGKLAKLDKIGMGIGTWIDVPDLLMLPAWCKRLLAGPFSSHSRIRYGMVLVTLLVVATASHLNAASSVFLLKLKASTT 470
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 11358929 11366833 + CcPI632755_10g007470.1 Cco10g0747 189705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco10g0747 470 ProSiteProfiles Cytochrome c family profile. 163 270 IPR009056 GO:0009055(InterPro)|GO:0020037(InterPro)
Cco10g0747 470 Gene3D - 140 335 IPR036909 GO:0009055(InterPro)|GO:0020037(InterPro)
Cco10g0747 470 FunFam Cytochrome c1, heme protein, mitochondrial 336 380 - -
Cco10g0747 470 SUPERFAMILY Cytochrome c 144 334 IPR036909 GO:0009055(InterPro)|GO:0020037(InterPro)
Cco10g0747 470 Pfam Cytochrome C1 family 151 367 IPR002326 GO:0009055(InterPro)|GO:0020037(InterPro)
Cco10g0747 470 PANTHER CYTOCHROME C1 99 378 IPR002326 GO:0005750(PANTHER)|GO:0006122(PANTHER)|GO:0009055(InterPro)|GO:0020037(InterPro)
Cco10g0747 470 PRINTS Cytochrome C1 signature 247 271 IPR002326 GO:0009055(InterPro)|GO:0020037(InterPro)
Cco10g0747 470 PRINTS Cytochrome C1 signature 285 296 IPR002326 GO:0009055(InterPro)|GO:0020037(InterPro)
Cco10g0747 470 PRINTS Cytochrome C1 signature 316 335 IPR002326 GO:0009055(InterPro)|GO:0020037(InterPro)
Cco10g0747 470 PRINTS Cytochrome C1 signature 149 168 IPR002326 GO:0009055(InterPro)|GO:0020037(InterPro)
Cco10g0747 470 PRINTS Cytochrome C1 signature 214 234 IPR002326 GO:0009055(InterPro)|GO:0020037(InterPro)
Cco10g0747 470 PRINTS Cytochrome C1 signature 296 315 IPR002326 GO:0009055(InterPro)|GO:0020037(InterPro)
Cco10g0747 470 PRINTS Cytochrome C1 signature 335 350 IPR002326 GO:0009055(InterPro)|GO:0020037(InterPro)
Cco10g0747 470 PRINTS Cytochrome C1 signature 169 188 IPR002326 GO:0009055(InterPro)|GO:0020037(InterPro)
Cco10g0747 470 Gene3D - 336 381 - -
Cco10g0747 470 SUPERFAMILY Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor 335 378 IPR021157 -
Cco10g0747 470 FunFam Cytochrome c1, heme protein 140 335 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco10g0747 K00413 - csv:101215010 602.053