Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cco10g0748 ATGGCTGCCAATTTCGCCATGCTTAAACCTTGTTCGGCATTTTCGACTTCATCATCCGTTCAGAGGAAATTTCGTGCGCATAAATCACTATGCACTGCCCCATGTTCCTCTTTTTATCCACAATGTCAAGGAGGAGCTTATGGTTTATGTGCCGTTAAATGTGCTTCTTCAAATGGGAAGGGGCCTGATTCCCTGGATAATGGAGTTAAAAAAGTGGAGAGGTTACTTGAAGAGAAACGGCGGGCTGAATTGTCTGCTCGGATCGCTTCTGGCGAATTTACAGTCGAAAAGCCTGGTTTTCCATCTATATTGAGGAGTGGGTTGTCCAAGTTGGGTGTTCCCAGTGAGATTCTGGATTTACTATTTGGTTTCGTCAATGCTCAAGAAGAATATCCCAAGATTCCAGAGGCTAAAGGATCAATAAGTGCAATTCGTAGTGAGGCTTTCTTCATACCTCTGTATGAGCTTTATCTCACGTATGGTGGAATATTTAGATTGACTTTTGGGCCAAAGTCGTTCTTGATAGTGTCTGATCCTTCCATTGCTAAACATATACTGAAGGATAATCCAAAGAACTATTCTAAGGGTATCTTAGCTGAAATTCTTGACTTTGTCATGGGGAAGGGGCTTATACCAGCTGATGGGGAGATATGGCGTGTACGAAGACGGGCTATAGTCCCTTCTTTGCATATGAAGTATGTAGGAGCTATGATTAATCTTTTTGGAGAAGCTGCAGATAGGCTTTGCAAGAAGCTAGATGCTGCAGCATCTGATGGAGTAGATGTGGAAATGGAGTCCCTATTCTCCCGTTTGACTTTAGATATCATTGGCAAGGCAGTTTTTAACTATGACTTTGATTCACTTACAAATGATGCTGGCATAGTTGAGGCTGTTTATACTGTGCTAAGAGAAGCAGAAGATCGCAGTGTTGCGCCAATTCCGGTATGGGAAATTCCAATTTGGAAGGATATTTCACCACGGCAAAAAAAGGTCTCCAAAGCCCTCAAATTGATCAATGGCACTCTTGATCAACTAATTGCTATATGCAAGAGGATGGTTGATGAGGAGGAACTGCAGTTTCATGAGGAATACATGAATGAGCAAGATCCTAGCATCCTTCATTTCCTTTTGGCATCGGGAGATGATGTTTCGAGCAAGCAGCTTCGTGATGACTTGATGACCATGCTTATAGCTGGGCATGAAACATCTGCTGCAGTCTTAACATGGACCTTTTATCTTCTTTCGAAGGTTGACTCAGTCCTTGGGGATCGTTTTCCAACAATTGAAGATATGAAGAACCTCAAATATGCCACACGAATAATTAATGAATCCTTGAGGCTTTACCCACAGCCCCCAGTTTTAATACGTCGATCTCTTGATAACGATATGCTCGGGAAGTACCCCATAAAGAAGGGTGAGGACATATTCATATCTGTTTGGAACTTGCATCGCAGTCCAGAACTTTGGGATGATGCAGATAAATTTAATCCTGAAAGGTGGCCCTTGGATGGCCCCAATCCTAATGAGACAAATCAAAATTTCAGATATTTGCCTTTTGGTGGTGGACCACGGAAATGTGTGGGAGACATATTTGCTTCATATGAGACTGTTGTAGCACTTGCCATGCTTGTACGGCGATTTGACTTCCAAATAGCACTTGGAGCACCTCCAGTAAAAATGACAACAGGAGCTACAATTCACACAACAGATGGATTGCAAATGACAGTTACACGAAGAATGAAACCTCCAATCATACCCACTTTAGAGGTGCCTGAAATGGTCGTTGATTCATCTGTCAGTTTCTTGAAAGATGAAACACAAATTGTTCAAGAAGGAGAAGTTTCTTCTGCACATTCCTAA 1860 42.2 MAANFAMLKPCSAFSTSSSVQRKFRAHKSLCTAPCSSFYPQCQGGAYGLCAVKCASSNGKGPDSLDNGVKKVERLLEEKRRAELSARIASGEFTVEKPGFPSILRSGLSKLGVPSEILDLLFGFVNAQEEYPKIPEAKGSISAIRSEAFFIPLYELYLTYGGIFRLTFGPKSFLIVSDPSIAKHILKDNPKNYSKGILAEILDFVMGKGLIPADGEIWRVRRRAIVPSLHMKYVGAMINLFGEAADRLCKKLDAAASDGVDVEMESLFSRLTLDIIGKAVFNYDFDSLTNDAGIVEAVYTVLREAEDRSVAPIPVWEIPIWKDISPRQKKVSKALKLINGTLDQLIAICKRMVDEEELQFHEEYMNEQDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKVDSVLGDRFPTIEDMKNLKYATRIINESLRLYPQPPVLIRRSLDNDMLGKYPIKKGEDIFISVWNLHRSPELWDDADKFNPERWPLDGPNPNETNQNFRYLPFGGGPRKCVGDIFASYETVVALAMLVRRFDFQIALGAPPVKMTTGATIHTTDGLQMTVTRRMKPPIIPTLEVPEMVVDSSVSFLKDETQIVQEGEVSSAHS 619
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
10 11581371 11588832 - CcPI632755_10g007480.1 Cco10g0748 189706
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cco10g0748 619 PRINTS P450 superfamily signature 526 537 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco10g0748 619 PRINTS P450 superfamily signature 398 415 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco10g0748 619 PRINTS P450 superfamily signature 439 450 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco10g0748 619 PRINTS P450 superfamily signature 517 526 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco10g0748 619 SUPERFAMILY Cytochrome P450 145 579 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco10g0748 619 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 519 528 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Cco10g0748 619 PANTHER CYTOCHROME P450 FAMILY 4 145 559 IPR050196 GO:0009507(PANTHER)|GO:0010291(PANTHER)|GO:0016123(PANTHER)
Cco10g0748 619 CDD CYP97 151 572 - -
Cco10g0748 619 Pfam Cytochrome P450 154 563 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco10g0748 619 Gene3D Cytochrome P450 132 585 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco10g0748 619 PRINTS E-class P450 group I signature 478 502 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco10g0748 619 PRINTS E-class P450 group I signature 387 404 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco10g0748 619 PRINTS E-class P450 group I signature 438 456 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco10g0748 619 PRINTS E-class P450 group I signature 157 176 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco10g0748 619 PRINTS E-class P450 group I signature 516 526 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco10g0748 619 PRINTS E-class P450 group I signature 526 549 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco04g1162 Cco-Chr4:27041090 Cco10g0748 Cco-Chr10:11581371 8.90E-125 dispersed
Cco07g1172 Cco-Chr7:25460220 Cco10g0748 Cco-Chr10:11581371 2.20E-114 dispersed
Cco10g0748 Cco-Chr10:11581371 Cco11g1762 Cco-Chr11:30360804 1.20E-28 dispersed
Cco10g0748 Cco-Chr10:11581371 Cco07g0560 Cco-Chr7:7274832 2.00E-31 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco10g0748 K15747 - csv:101215492 1131.7