Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cco10g0748 | ATGGCTGCCAATTTCGCCATGCTTAAACCTTGTTCGGCATTTTCGACTTCATCATCCGTTCAGAGGAAATTTCGTGCGCATAAATCACTATGCACTGCCCCATGTTCCTCTTTTTATCCACAATGTCAAGGAGGAGCTTATGGTTTATGTGCCGTTAAATGTGCTTCTTCAAATGGGAAGGGGCCTGATTCCCTGGATAATGGAGTTAAAAAAGTGGAGAGGTTACTTGAAGAGAAACGGCGGGCTGAATTGTCTGCTCGGATCGCTTCTGGCGAATTTACAGTCGAAAAGCCTGGTTTTCCATCTATATTGAGGAGTGGGTTGTCCAAGTTGGGTGTTCCCAGTGAGATTCTGGATTTACTATTTGGTTTCGTCAATGCTCAAGAAGAATATCCCAAGATTCCAGAGGCTAAAGGATCAATAAGTGCAATTCGTAGTGAGGCTTTCTTCATACCTCTGTATGAGCTTTATCTCACGTATGGTGGAATATTTAGATTGACTTTTGGGCCAAAGTCGTTCTTGATAGTGTCTGATCCTTCCATTGCTAAACATATACTGAAGGATAATCCAAAGAACTATTCTAAGGGTATCTTAGCTGAAATTCTTGACTTTGTCATGGGGAAGGGGCTTATACCAGCTGATGGGGAGATATGGCGTGTACGAAGACGGGCTATAGTCCCTTCTTTGCATATGAAGTATGTAGGAGCTATGATTAATCTTTTTGGAGAAGCTGCAGATAGGCTTTGCAAGAAGCTAGATGCTGCAGCATCTGATGGAGTAGATGTGGAAATGGAGTCCCTATTCTCCCGTTTGACTTTAGATATCATTGGCAAGGCAGTTTTTAACTATGACTTTGATTCACTTACAAATGATGCTGGCATAGTTGAGGCTGTTTATACTGTGCTAAGAGAAGCAGAAGATCGCAGTGTTGCGCCAATTCCGGTATGGGAAATTCCAATTTGGAAGGATATTTCACCACGGCAAAAAAAGGTCTCCAAAGCCCTCAAATTGATCAATGGCACTCTTGATCAACTAATTGCTATATGCAAGAGGATGGTTGATGAGGAGGAACTGCAGTTTCATGAGGAATACATGAATGAGCAAGATCCTAGCATCCTTCATTTCCTTTTGGCATCGGGAGATGATGTTTCGAGCAAGCAGCTTCGTGATGACTTGATGACCATGCTTATAGCTGGGCATGAAACATCTGCTGCAGTCTTAACATGGACCTTTTATCTTCTTTCGAAGGTTGACTCAGTCCTTGGGGATCGTTTTCCAACAATTGAAGATATGAAGAACCTCAAATATGCCACACGAATAATTAATGAATCCTTGAGGCTTTACCCACAGCCCCCAGTTTTAATACGTCGATCTCTTGATAACGATATGCTCGGGAAGTACCCCATAAAGAAGGGTGAGGACATATTCATATCTGTTTGGAACTTGCATCGCAGTCCAGAACTTTGGGATGATGCAGATAAATTTAATCCTGAAAGGTGGCCCTTGGATGGCCCCAATCCTAATGAGACAAATCAAAATTTCAGATATTTGCCTTTTGGTGGTGGACCACGGAAATGTGTGGGAGACATATTTGCTTCATATGAGACTGTTGTAGCACTTGCCATGCTTGTACGGCGATTTGACTTCCAAATAGCACTTGGAGCACCTCCAGTAAAAATGACAACAGGAGCTACAATTCACACAACAGATGGATTGCAAATGACAGTTACACGAAGAATGAAACCTCCAATCATACCCACTTTAGAGGTGCCTGAAATGGTCGTTGATTCATCTGTCAGTTTCTTGAAAGATGAAACACAAATTGTTCAAGAAGGAGAAGTTTCTTCTGCACATTCCTAA | 1860 | 42.2 | MAANFAMLKPCSAFSTSSSVQRKFRAHKSLCTAPCSSFYPQCQGGAYGLCAVKCASSNGKGPDSLDNGVKKVERLLEEKRRAELSARIASGEFTVEKPGFPSILRSGLSKLGVPSEILDLLFGFVNAQEEYPKIPEAKGSISAIRSEAFFIPLYELYLTYGGIFRLTFGPKSFLIVSDPSIAKHILKDNPKNYSKGILAEILDFVMGKGLIPADGEIWRVRRRAIVPSLHMKYVGAMINLFGEAADRLCKKLDAAASDGVDVEMESLFSRLTLDIIGKAVFNYDFDSLTNDAGIVEAVYTVLREAEDRSVAPIPVWEIPIWKDISPRQKKVSKALKLINGTLDQLIAICKRMVDEEELQFHEEYMNEQDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKVDSVLGDRFPTIEDMKNLKYATRIINESLRLYPQPPVLIRRSLDNDMLGKYPIKKGEDIFISVWNLHRSPELWDDADKFNPERWPLDGPNPNETNQNFRYLPFGGGPRKCVGDIFASYETVVALAMLVRRFDFQIALGAPPVKMTTGATIHTTDGLQMTVTRRMKPPIIPTLEVPEMVVDSSVSFLKDETQIVQEGEVSSAHS | 619 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 10 | 11581371 | 11588832 | - | CcPI632755_10g007480.1 | Cco10g0748 | 189706 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cco10g0748 | 619 | PRINTS | P450 superfamily signature | 526 | 537 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco10g0748 | 619 | PRINTS | P450 superfamily signature | 398 | 415 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco10g0748 | 619 | PRINTS | P450 superfamily signature | 439 | 450 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco10g0748 | 619 | PRINTS | P450 superfamily signature | 517 | 526 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco10g0748 | 619 | SUPERFAMILY | Cytochrome P450 | 145 | 579 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco10g0748 | 619 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 519 | 528 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Cco10g0748 | 619 | PANTHER | CYTOCHROME P450 FAMILY 4 | 145 | 559 | IPR050196 | GO:0009507(PANTHER)|GO:0010291(PANTHER)|GO:0016123(PANTHER) | |
| Cco10g0748 | 619 | CDD | CYP97 | 151 | 572 | - | - | |
| Cco10g0748 | 619 | Pfam | Cytochrome P450 | 154 | 563 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco10g0748 | 619 | Gene3D | Cytochrome P450 | 132 | 585 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco10g0748 | 619 | PRINTS | E-class P450 group I signature | 478 | 502 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco10g0748 | 619 | PRINTS | E-class P450 group I signature | 387 | 404 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco10g0748 | 619 | PRINTS | E-class P450 group I signature | 438 | 456 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco10g0748 | 619 | PRINTS | E-class P450 group I signature | 157 | 176 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco10g0748 | 619 | PRINTS | E-class P450 group I signature | 516 | 526 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco10g0748 | 619 | PRINTS | E-class P450 group I signature | 526 | 549 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cco04g1162 | Cco-Chr4:27041090 | Cco10g0748 | Cco-Chr10:11581371 | 8.90E-125 | dispersed | |
| Cco07g1172 | Cco-Chr7:25460220 | Cco10g0748 | Cco-Chr10:11581371 | 2.20E-114 | dispersed | |
| Cco10g0748 | Cco-Chr10:11581371 | Cco11g1762 | Cco-Chr11:30360804 | 1.20E-28 | dispersed | |
| Cco10g0748 | Cco-Chr10:11581371 | Cco07g0560 | Cco-Chr7:7274832 | 2.00E-31 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cco10g0748 | K15747 | - | csv:101215492 | 1131.7 |