Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco10g0913 ATGGAAAGCTTTGCTCTTCAATCTGTCTCCACTACTACTTCTTTTTCCCCCCACTCTCCCATTTCTCGAATTTCTCTCCTCCATCGCTCTAAACCCATTTCCCATTCCCTCTCATCTCCCACTTCCCTTCATTTTTCTCGCTCGATTTCGCTATTTCAATCCACCTCACCAATCTCCCAATCCCCCCCTTTCACTTCTCGGTCTTCCCTTTTCAATCCCCTCTTCAATCCCAAATTGCGTCGAGCCTTTCCAATGCGAACCAGTGCCTCTCAATCGCCCGATAATCAGTCATTGCCACCGAACCCACCTCCCCGACAAGGTGCTAAGCCAATCCCTTTTCTGATTTCCATCGCTATTGGCCTCATTGTTCGTTTTGCCGTCCCCAAACCGGTGGAGGTTTCAGCTCAAGCCTGGCAGTTGCTCTCGATTTTCTTATCGACTATTGCTGGACTCGTTTTGAGTCCCTTGCCGGTCGGTGCTTGGGCGTTTCTTGGCTTGACTGTCGCTGTGGTTACTAAGACTTTGACGTTTGCTGCTGCTTTTAATGCTTTCACCAGTGAGGTGATTTGGTTGATTGTCATTTCCTTCTTTTTCGCTCGTGGGTTTGTGAAAACTGGGTTGGGGGACCGAATTGCGACGTATTTTGTAAAATGGATGGGGAAGAGTACAATTGGTTTGTCTTATGGTTTGACGATTAGTGAGGCTTTGATTGCCCCTGCTATGCCGAGCACTACGGCCAGGGCTGGGGGCGTGTTTTTGCCTATTATTAAGTCTTTGTCGCTTGCTGCTGATAGTAAACCGAACCACCCATCGTCTAAAAAGATCGGTGCTTACCTTATTCAATCTCAGTTTCAGTGTGCTGGTAACTCTAGTGCCCTTTTCCTAACTGGTGCTGCTCAAAACTTGTTGTGCCTTAAATTGGCTGAGGAACTTGGTGTACAAATATCTAGCCCCTGGCTTACTTGGGCCAAGTTTGCTTGTGCGCCAGCAATCATTAGTCTCTTAGTAACTCCGGTAATTTTATACAAGCTGTTTCCTCCAGAAACCAAGGACACACCTGAGGCCCCAGCCATGGCTACAAGAAAATTGGAGGCTATGGGTCCTGTCACAAAAAACGAATGGGTCATGGTCGGTACCATGCTTATTGCAGTCTCTTTATGGATTGCTGGAGAGGCCCTTAAAATTCCTAGTGTTGTAGCTGCAATGATTGGTTTATCAATACTCCTTACACTTGGAGTCCTAAACTGGGATGACTGCTTATCCGAAAAGTCAGCCTGGGATACATTAGCTTGGTTTGCCGTCCTGGTGGGCATGGCTGGCCAATTGACAAGTCTTGGTCTCGTGGGCTGGATGTCGAATTGTGTGGCCAGTCTGCTTAAGTCTCTTTCTCTCAGCTGGCCTGCAGCATTTGCTATTCTTCAGGCATCTTACTTCTTCGTTCACTACCTCTTTGCTAGCCAAACCGGTCACGTTGGCGCTTTGTACTCGGCATTCCTTGCAATGCACTTGGCTGCCAAGGTACCGGGTGTGTTGGCAGCTTTGGCCTTAGCTTACAACACAAATCTCTTTGGCGCTCTGACTCATTACAGCAGTGGCCAAGCTGCTGTATACTATGGAGCGGGTTATGTTGAGCTACCAGATGTATTCAAAATCGGTTTCGTGATGGCCCTCATAAACGGTACTATCTGGACTGTGGTTGGATGTATTTGGTGGAAGATTCTGGGTCTATATTGA 1734 47.64 MESFALQSVSTTTSFSPHSPISRISLLHRSKPISHSLSSPTSLHFSRSISLFQSTSPISQSPPFTSRSSLFNPLFNPKLRRAFPMRTSASQSPDNQSLPPNPPPRQGAKPIPFLISIAIGLIVRFAVPKPVEVSAQAWQLLSIFLSTIAGLVLSPLPVGAWAFLGLTVAVVTKTLTFAAAFNAFTSEVIWLIVISFFFARGFVKTGLGDRIATYFVKWMGKSTIGLSYGLTISEALIAPAMPSTTARAGGVFLPIIKSLSLAADSKPNHPSSKKIGAYLIQSQFQCAGNSSALFLTGAAQNLLCLKLAEELGVQISSPWLTWAKFACAPAIISLLVTPVILYKLFPPETKDTPEAPAMATRKLEAMGPVTKNEWVMVGTMLIAVSLWIAGEALKIPSVVAAMIGLSILLTLGVLNWDDCLSEKSAWDTLAWFAVLVGMAGQLTSLGLVGWMSNCVASLLKSLSLSWPAAFAILQASYFFVHYLFASQTGHVGALYSAFLAMHLAAKVPGVLAALALAYNTNLFGALTHYSSGQAAVYYGAGYVELPDVFKIGFVMALINGTIWTVVGCIWWKILGLY 577
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 19320241 19323740 - CcPI632755_10g009130.1 Cco10g0913 189871
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco10g0913 577 Pfam Sodium:sulfate symporter transmembrane region 113 576 IPR001898 GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0055085(InterPro)
Cco10g0913 577 MobiDBLite consensus disorder prediction 1 20 - -
Cco10g0913 577 PANTHER DICARBOXYLATE TRANSPORTER 2.1, CHLOROPLASTIC 16 577 IPR030676 GO:0005215(PANTHER)
Cco10g0913 577 NCBIfam DASS family sodium-coupled anion symporter 129 571 IPR001898 GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0055085(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco02g2478 Cco-Chr2:37096938 Cco10g0913 Cco-Chr10:19320241 2.20E-125 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco10g0913 - - - 0.0