Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco10g1077 ATGTCATCATCGTACGGAACTAGGAAAAACTGCTTGAGATGGTGCAATTTGTGGCTCAACAAAACTGTTAAGCTTGTGGTAATCTACATAAAAAGGCTCGGTGCCTACTTTATGCGTGAATTGGAAAATGGGCAATTACTTGGGAATGGTTTCCTATTGATTAAAATGGCATCATTTGCTAAAGAAAATGTAGAAAGTGGACAAGCAATTTCTAGTATTATTGGGACAGGAAAATGTGAAAGCTACTTCATTTTTAGTAATGAAACTTCCCTTGGGGATGCATTTCGGATATTCCTATACTTTATGGGCCTTGCATATTGTTTTGTTGGATTGTCTGCTATTACTGCTCGATTTTTCCGGTCCATGGAGAATGTTGTGAAGCACTCAAGGAAGGTGGTAGAGATAGATCCGCACACCAATACTGAAATTATTCGATATGAGAAAGTCTGGAACTTTACAATTGCAGATATCAGCTTACTGGCGTTTGGCACTAGCTTTCCTCAAATATCATTAGCTACTATTGATGCTATTCGAAATATTGGCAACCTGTATGCTGGAGGTTTGGGACCTGGAACACTGGTTGGTTCTGCTGCTTTCGACCTTTTTCCCATTCATGCTGTTTGCGTTGTAGTGCCTAAGGCAGGGGAGTTGAAAAAAATATCTGATATAGGAGTTTGGCTAGTTGAGCTCGCTTGGTCTTTCTGGGCTTATATTTGGCTATACATTATTTTGGAGGTGTGGACACCAAATGTAATAACTCTTTGGGAAGCTTTGTTGACTGTGCTACAGTATGGATTACTGCTTACACATGCTTACGCTCAAGATAAGCAATGGCCGTACTTGTCCTTTCCTTTGGCAAGAACTGAGAGGCCAGAGGAATGGGTGCCACCTGAGATTGCTATATGCCCACAGGATAATCCCTGTAGAGAGGAATTTCAAGCCCATGAGAATGAGCAGAGAACCATTGTTGACATTTTCTCGATCCATGATAAAGATGAGAAAGTGTATCATGAAGTTCCTGGACATGATGTTGCTGAATCCTCCTGTAGTAATTTTCCAGAGGAGATGGATGGAAAGGCAGACCACCCTCATGTGCTTAAAATTTGGAAACAGCAGTTTGTGGATGCACTTTCGTTGGGAACTTCGGAATCAAAGAAGCTGAAAAACATTTATTTACGACTCGCAAGATTATGCTGGCAGTTGCTTCTTTTTCCATGGAGACTTTTGTTTGCTTTTGTACCTCCTTATCACATTGCTCATGGATGGCTTGCCTTTATTTGCTCCCTTATTTTCATCAGTGCGATAGCTTATGTCGTCACTAAGCTCACAGATCTAATAAGCTGTGTCTCAGGAATAAATCCTTATGTCATAGCATTTACAGCATTGGCAAGTGGAACTTCTTGGCCAGATTTAGTGGCTAGTAAGATTGCTGCCGAGCGCCAGACAACGGCAGACTCTGCCATTGCAAACATCACTTGCAGCAATTCAGTGAACATATACGTGGGAATTGGAGTTCCATGGCTGATAAGCACAACATACAATTTCATAGCGTATAGAGAACCACTAAAGATAAAGGATGCAGCAGGTCTGAGCTTCAGTTTGCTGGTGTTTTTTTCAACTTCAGTGGCTTGCATTGCTGTGCTTGTGTTTAGGCGTCTAACATTAGGTGCAGAACTTGGAGGGCCAAGGCTTTGGGCTTGGATTACATGTTTCTTTTTCATGTTGCTTTGGCTCATCTTTGTTGTGCTCTCTTCCCTCAAGGTTTCAGATATCATCTGA 1779 41.6 MSSSYGTRKNCLRWCNLWLNKTVKLVVIYIKRLGAYFMRELENGQLLGNGFLLIKMASFAKENVESGQAISSIIGTGKCESYFIFSNETSLGDAFRIFLYFMGLAYCFVGLSAITARFFRSMENVVKHSRKVVEIDPHTNTEIIRYEKVWNFTIADISLLAFGTSFPQISLATIDAIRNIGNLYAGGLGPGTLVGSAAFDLFPIHAVCVVVPKAGELKKISDIGVWLVELAWSFWAYIWLYIILEVWTPNVITLWEALLTVLQYGLLLTHAYAQDKQWPYLSFPLARTERPEEWVPPEIAICPQDNPCREEFQAHENEQRTIVDIFSIHDKDEKVYHEVPGHDVAESSCSNFPEEMDGKADHPHVLKIWKQQFVDALSLGTSESKKLKNIYLRLARLCWQLLLFPWRLLFAFVPPYHIAHGWLAFICSLIFISAIAYVVTKLTDLISCVSGINPYVIAFTALASGTSWPDLVASKIAAERQTTADSAIANITCSNSVNIYVGIGVPWLISTTYNFIAYREPLKIKDAAGLSFSLLVFFSTSVACIAVLVFRRLTLGAELGGPRLWAWITCFFFMLLWLIFVVLSSLKVSDII 592
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 22948035 22954843 + CcPI632755_10g010770.1 Cco10g1077 190035
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco10g1077 592 Gene3D - 153 291 IPR044880 -
Cco10g1077 592 Gene3D - 376 586 IPR044880 -
Cco10g1077 592 PANTHER SODIUM/CALCIUM EXCHANGER 73 278 IPR051171 GO:0015491(PANTHER)|GO:0016020(PANTHER)|GO:0030001(PANTHER)
Cco10g1077 592 Pfam Sodium/calcium exchanger protein 100 271 IPR004837 GO:0016020(InterPro)|GO:0055085(InterPro)
Cco10g1077 592 Pfam Sodium/calcium exchanger protein 420 584 IPR004837 GO:0016020(InterPro)|GO:0055085(InterPro)
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco10g1077 K03452 - csv:101205540 996.882