Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco10g1283 ATGCCGATCGATACCTCTGCAGTTTCCGGCCAAATTGTTTGTGTCACCGGCGCCGGAGGCTTCATTGCTTCATGGCTTGTAAAGCTTCTTCTTGAGAAGGGCTACACTGTTAGAGGAACCGTTAGAAAACCAGATGACCAAAAGAATGCTCATTTGAACAACTTAGAAGGAGCTAAAGAGCGGTTGTCTTTGTTTAGTGCTGATCTTCTTGATTTTGACAGTCTCAAAGCAGCTATTATGGGTTGCCATGGTGTTTTCCACACCGCGTCTCCGGTGACCGATGATCCCGAAAAGGTGGAACAGGCCATAATCGGAACAAAGAATGTCATGACCGCGGCTGCTGAAGCAAATGTTCGACGAGTGGTGTTCACGTCGTTGATTGGCTCCGTCTACATGAACCCTAACCGAAGCCCCGACGTGGTGGTGGATGAGTCTTGTTGGAGTGACCTTGAGTTTTGCAAGAACACCAAGGGATTAAATTTATGCACAGCATTGGTATTGCTATGCAAAGACAGTGGCAGAACAAGCAGCATGGGAAGTGGCAAAAGAAAAAGGGGTGGATCTTGTGGTGGATCAGCAAAAACATATGTAAATGCAGTTCAAGGTTATGTTGATGTCAAGGATGTTGCAAAAGCCCATGTTTTGGTTTATGAAACTCCTTCCGCTTCAGGAAGATATATTTGTGTTGAAAGTATGCTTCATCGTGGAGAATTGGTTGATATTCTTACAAGCTTGTTCCCTCAATATCCTCTCCCTACCAAGTAA 765 45.1 MPIDTSAVSGQIVCVTGAGGFIASWLVKLLLEKGYTVRGTVRKPDDQKNAHLNNLEGAKERLSLFSADLLDFDSLKAAIMGCHGVFHTASPVTDDPEKVEQAIIGTKNVMTAAAEANVRRVVFTSLIGSVYMNPNRSPDVVVDESCWSDLEFCKNTKGLNLCTALVLLCKDSGRTSSMGSGKRKRGGSCGGSAKTYVNAVQGYVDVKDVAKAHVLVYETPSASGRYICVESMLHRGELVDILTSLFPQYPLPTK 254
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 25737379 25738609 - CcPI632755_10g012830.1 Cco10g1283 190241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco10g1283 254 Pfam NAD(P)H-binding 17 134 IPR016040 -
Cco10g1283 254 Gene3D - 3 168 - -
Cco10g1283 254 Gene3D - 172 254 - -
Cco10g1283 254 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 12 247 IPR050425 GO:0016616(PANTHER)
Cco10g1283 254 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 6 252 IPR036291 -
Cco10g1283 254 CDD FR_SDR_e 13 254 - -
Cco10g1283 254 FunFam NAD(P)-binding Rossmann-fold superfamily protein 4 114 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco10g1283 Cco-Chr10:25737379 Cco10g1285 Cco-Chr10:25763290 4.60E-99 dispersed
Cco10g1283 Cco-Chr10:25737379 Cco10g1284 Cco-Chr10:25741373 5.10E-114 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco10g1283 K09753 - csv:116401668 390.963