Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cco10g1328 | ATGGAGTTGGTAAGCGAGAAGAGGGATTTTGATTCTTCAAACGACAACAACAAGCTCAACTCTGCTCAACCACTTCTTGATTCTTCTTATCAACCCTCACCCGCTGATGACACAAATGCCAAAGAAGCTGAAGAGTTAAGTGAACGCGTAGCTCGAGACCTCAAAGATGGCCTTCATCCCCTAAAGCACAAGTTTGCATTTTGGTACACTCGTCGAACACCTGGAGTTCGGACTCAAACGTCATATGAGGACAACATAAAAAAGATCGTGGACTTCAGCTCGGTTGAAGGTTTTTGGGTAAGCTATTGCCATTTGGCTCGTCCTTCTTCTTTGCCAAGCCCAACAGATCTGCATCTCTTTAAGGAAGGAATCCGTCCACTCTGGGAGGATTCTGCGAACTGCAATGGTGGAAAGTGGATAATACGATTTAAGAAAGTTGTATCTGGGCGATTTTGGGAAGATTTGGTTCTTGCATTAGTGGGCGACCAACTTGATTTTGGCGATAACATATGTGGTGCCGTGCTTAGCATTCGTTTCAACGAGGATATTTTGAGCGTCTGGAACCGCAATGCATCTGATCATCAGGCGGTGATGGGTCTGCGAGATTCAATCAAAAGGCACTTAAAGCTCCCGCATGGGGTGAGAAAAAGGAGAATGTACCTCGAAGCTGAATGGTGTTTACATGCAGATGTAGATGCTGGAATAGCGGAGCAGCTAAGTTCTGTCCATTGTAATAATGGACAAACACAGCTGGCTAATGTCAGCTTCTTTTGTCTTGGACAACTCACCATGAATCTTTCAACCCCCATCCCTTCTTCACTTAACATTCCATTTCTCTCTATATCTTAA | 849 | 44.52 | MELVSEKRDFDSSNDNNKLNSAQPLLDSSYQPSPADDTNAKEAEELSERVARDLKDGLHPLKHKFAFWYTRRTPGVRTQTSYEDNIKKIVDFSSVEGFWVSYCHLARPSSLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVVSGRFWEDLVLALVGDQLDFGDNICGAVLSIRFNEDILSVWNRNASDHQAVMGLRDSIKRHLKLPHGVRKRRMYLEAEWCLHADVDAGIAEQLSSVHCNNGQTQLANVSFFCLGQLTMNLSTPIPSSLNIPFLSIS | 282 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 26223206 | 26234665 | + | CcPI632755_10g013280.1 | Cco10g1328 | 190286 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cco10g1328 | 282 | Gene3D | RNA Cap, Translation Initiation Factor Eif4e | 31 | 230 | IPR023398 | - | |
Cco10g1328 | 282 | MobiDBLite | consensus disorder prediction | 15 | 36 | - | - | |
Cco10g1328 | 282 | Pfam | Eukaryotic initiation factor 4E | 60 | 212 | IPR001040 | GO:0003723(InterPro)|GO:0003743(InterPro)|GO:0006413(InterPro) | |
Cco10g1328 | 282 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED | 35 | 215 | IPR001040 | GO:0000340(PANTHER)|GO:0003723(InterPro)|GO:0003743(PANTHER)|GO:0003743(InterPro)|GO:0006413(InterPro)|GO:0016281(PANTHER) | |
Cco10g1328 | 282 | SUPERFAMILY | eIF4e-like | 35 | 214 | IPR023398 | - | |
Cco10g1328 | 282 | ProSitePatterns | Eukaryotic initiation factor 4E signature. | 116 | 139 | IPR019770 | GO:0003723(InterPro)|GO:0003743(InterPro)|GO:0005737(InterPro)|GO:0006413(InterPro) | |
Cco10g1328 | 282 | MobiDBLite | consensus disorder prediction | 1 | 46 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cco06g0761 | Cco-Chr6:8741529 | Cco10g1328 | Cco-Chr10:26223206 | 4.20E-26 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cco10g1328 | K03259 | - | csv:101204290 | 426.787 |