Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco10g1485 ATGATTAAGAATCAGATCGATCGGCATCATCATCTTCCATCTGTTCTTGATAATCGAATTGCTGATTCTTCAACTCGGATCGCAAAAGAAGACTTTCATATTCTCCGATTCCTTGGCCTTTCTCTTCCTTCGTCTTCAACTGGCCTTAGAATGTATGGTTTTGAAGCGCTTACCTTCAACATTCATGGAGGCTATTTGGAGGCCATCGTCCGTGGACATAGGGCTGGCTTGCTGACCGCCGCTGATTATAACAATTTGTGTCAGTGCGAAACCCTAGATGATATCAAGATGCACCTCTCTGCCACTGAGTATGGTCCTTATCTCCAAAACGAACCATCTCCACTACATACAACAACCATTGTGGAGAAATGCACCCTTAAACTGGTTGACGAGTATAAGCACATGTTGTGCCAAGCCACCGAGCCTTTGTCTACCTTCTTAGAGTATATCACATATGGTCACATGATAGACAATGTTGTCCTTATTGTTACTGGAACCTTGCATGAGAGAGATGTTCAGGAACTGTTGGAGAAGTGCCACCCTTTGGGCATGTTTGACAGCATTGCTACCTTGGCAGTTGCTCAGAATATGCGGGAACTTTATAGATTGGTGCTTGTTGACACCCCTTTGGCTCCATACTTTTCAGAGTGTATCACATCTGAGGATTTGGATGACATGAACATAGAAATTATGAGGAACACTCTCTATAAGGCATACCTAGAGGATTTCTACAGGTTCTGTCAGAAACTGGGTGGTGCCACTGCTGAGATCATGTCTGACCTCCTTGCTTTTGAGGCTGATAGAAGGGCTGTGAATATTACCATAAATAGTATTGGCACTGAGCTTACCCGAGATGATCGAAGGAAGTTGTATTCCAATTTTGGATTGCTTTATCCCTATGGTCATGAGGAACTTGCAATCTGTGAGGATATTGATCAGGTTCGTGGTGCCATGGAAAAATACCCTCCCTACCAGTCAATTTTTTCCAAGCTATCATATGGTGAGAGCCAGATGCTTGACAAGGCATTCTATGAAGAGGAGGTGAAAAGACTATGCTTAGCATTTGAGCAGCAGTTCCATTATGGTGTTTTCTTTGCATACATGAGGTTGAGGGAACAGGAGATTAGGAACCTAATGTGGATTTCGGAGTGTGTTGCTCAGAACCAGAAGTCGAGGGTTCACGACAGTGTTGTCTTCATATTTTAG 1206 43.45 MIKNQIDRHHHLPSVLDNRIADSSTRIAKEDFHILRFLGLSLPSSSTGLRMYGFEALTFNIHGGYLEAIVRGHRAGLLTAADYNNLCQCETLDDIKMHLSATEYGPYLQNEPSPLHTTTIVEKCTLKLVDEYKHMLCQATEPLSTFLEYITYGHMIDNVVLIVTGTLHERDVQELLEKCHPLGMFDSIATLAVAQNMRELYRLVLVDTPLAPYFSECITSEDLDDMNIEIMRNTLYKAYLEDFYRFCQKLGGATAEIMSDLLAFEADRRAVNITINSIGTELTRDDRRKLYSNFGLLYPYGHEELAICEDIDQVRGAMEKYPPYQSIFSKLSYGESQMLDKAFYEEEVKRLCLAFEQQFHYGVFFAYMRLREQEIRNLMWISECVAQNQKSRVHDSVVFIF 401
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 27872095 27877794 - CcPI632755_10g014850.1 Cco10g1485 190443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco10g1485 401 Gene3D - 256 359 IPR035067 -
Cco10g1485 401 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT AC39 51 401 IPR016727 GO:0007034(PANTHER)|GO:0007035(PANTHER)|GO:0016471(PANTHER)|GO:0033179(InterPro)|GO:0046961(InterPro)|GO:1902600(InterPro)
Cco10g1485 401 Gene3D - 141 249 IPR035067 -
Cco10g1485 401 PIRSF V-ATP_synth_D 54 400 IPR016727 GO:0033179(InterPro)|GO:0046961(InterPro)|GO:1902600(InterPro)
Cco10g1485 401 FunFam V-type proton ATPase subunit 256 359 - -
Cco10g1485 401 FunFam V-type proton ATPase subunit 141 255 - -
Cco10g1485 401 Pfam ATP synthase (C/AC39) subunit 66 394 IPR002843 GO:0046961(InterPro)
Cco10g1485 401 FunFam V-type proton ATPase subunit 64 178 - -
Cco10g1485 401 Gene3D ATP synthase (C/AC39) subunit, domain 3 64 385 IPR044911 -
Cco10g1485 401 SUPERFAMILY V-type ATP synthase subunit C 64 399 IPR036079 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco10g1485 K02146 - csv:101203260 715.687